EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000029211 (Gene tree)
Gene ID: 104664067
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 25090 bases
Position: chrKN295923.1:2170354-2195443
Accession: 104664067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000009552	HVSL	PF09749.9	2.7e-63	1	1
ENSRROP00000009560	HVSL	PF09749.9	1.5e-51	1	2
ENSRROP00000009560	HVSL	PF09749.9	1.5e-51	2	2
ENSRROP00000009561	HVSL	PF09749.9	6.3e-29	1	1
ENSRROP00000009564	HVSL	PF09749.9	8.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000033655	USB1-204	543	-	ENSRROP00000009564	180 (aa)	-	A0A2K6NZ54
ENSRROT00000033652	USB1-203	477	-	ENSRROP00000009561	158 (aa)	-	A0A2K6NZ63
ENSRROT00000033643	USB1-201	2019	XM_010365509	ENSRROP00000009552	265 (aa)	XP_010363811	A0A2K6NZ53
ENSRROT00000033651	USB1-202	744	-	ENSRROP00000009560	247 (aa)	-	A0A2K6NZ77

Gene Model

Click here to download ENSRROG00000029211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000029211's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000029211	USB1	100	96.604	ENSG00000103005	USB1	100	97.196	Homo_sapiens
ENSRROG00000029211	USB1	98	46.360	ENSAPOG00000011942	usb1	81	52.423	Acanthochromis_polyacanthus
ENSRROG00000029211	USB1	100	84.387	ENSAMEG00000017205	USB1	100	84.387	Ailuropoda_melanoleuca
ENSRROG00000029211	USB1	85	54.018	ENSACIG00000012234	usb1	82	54.018	Amphilophus_citrinellus
ENSRROG00000029211	USB1	95	50.598	ENSAOCG00000014831	usb1	80	54.185	Amphiprion_ocellaris
ENSRROG00000029211	USB1	95	50.996	ENSAPEG00000000296	usb1	80	54.626	Amphiprion_percula
ENSRROG00000029211	USB1	99	46.008	ENSATEG00000009348	usb1	82	52.814	Anabas_testudineus
ENSRROG00000029211	USB1	85	70.925	ENSAPLG00000002756	USB1	100	71.366	Anas_platyrhynchos
ENSRROG00000029211	USB1	86	64.192	ENSACAG00000015481	USB1	100	64.192	Anolis_carolinensis
ENSRROG00000029211	USB1	100	95.472	ENSANAG00000035640	USB1	100	95.472	Aotus_nancymaae
ENSRROG00000029211	USB1	94	50.201	ENSACLG00000020586	usb1	80	53.097	Astatotilapia_calliptera
ENSRROG00000029211	USB1	84	51.570	ENSAMXG00000040146	usb1	74	51.570	Astyanax_mexicanus
ENSRROG00000029211	USB1	100	84.151	ENSBTAG00000015758	USB1	100	84.151	Bos_taurus
ENSRROG00000029211	USB1	100	96.226	ENSCJAG00000011733	USB1	100	96.226	Callithrix_jacchus
ENSRROG00000029211	USB1	99	82.353	ENSCAFG00000008556	USB1	73	81.250	Canis_familiaris
ENSRROG00000029211	USB1	99	83.774	ENSCAFG00020009263	USB1	99	79.636	Canis_lupus_dingo
ENSRROG00000029211	USB1	100	83.774	ENSCHIG00000024290	USB1	100	83.774	Capra_hircus
ENSRROG00000029211	USB1	100	90.566	ENSTSYG00000006997	USB1	100	90.566	Carlito_syrichta
ENSRROG00000029211	USB1	75	86.441	ENSCAPG00000009057	USB1	100	73.364	Cavia_aperea
ENSRROG00000029211	USB1	100	83.209	ENSCPOG00000014325	USB1	100	82.090	Cavia_porcellus
ENSRROG00000029211	USB1	100	95.849	ENSCCAG00000022132	USB1	100	95.849	Cebus_capucinus
ENSRROG00000029211	USB1	100	98.491	ENSCATG00000032174	USB1	100	98.491	Cercocebus_atys
ENSRROG00000029211	USB1	66	88.068	ENSCLAG00000007363	USB1	100	88.068	Chinchilla_lanigera
ENSRROG00000029211	USB1	100	98.868	ENSCSAG00000004783	USB1	100	98.868	Chlorocebus_sabaeus
ENSRROG00000029211	USB1	88	68.534	ENSCPBG00000026943	USB1	83	68.831	Chrysemys_picta_bellii
ENSRROG00000029211	USB1	83	30.131	ENSCSAVG00000000894	-	82	30.131	Ciona_savignyi
ENSRROG00000029211	USB1	100	98.491	ENSCANG00000037135	USB1	100	98.491	Colobus_angolensis_palliatus
ENSRROG00000029211	USB1	100	85.075	ENSCGRG00001011243	USB1	100	84.701	Cricetulus_griseus_chok1gshd
ENSRROG00000029211	USB1	100	85.075	ENSCGRG00000013252	USB1	100	84.701	Cricetulus_griseus_crigri
ENSRROG00000029211	USB1	98	47.810	ENSCSEG00000013881	usb1	84	50.215	Cynoglossus_semilaevis
ENSRROG00000029211	USB1	85	50.000	ENSCVAG00000009252	usb1	97	50.439	Cyprinodon_variegatus
ENSRROG00000029211	USB1	85	50.446	ENSDARG00000003841	usb1	81	50.446	Danio_rerio
ENSRROG00000029211	USB1	100	83.019	ENSDORG00000001888	Usb1	100	83.019	Dipodomys_ordii
ENSRROG00000029211	USB1	77	40.000	FBgn0037713	CG16790	78	40.000	Drosophila_melanogaster
ENSRROG00000029211	USB1	96	75.163	ENSETEG00000019682	USB1	100	70.037	Echinops_telfairi
ENSRROG00000029211	USB1	84	50.901	ENSEBUG00000005889	usb1	78	50.901	Eptatretus_burgeri
ENSRROG00000029211	USB1	100	86.792	ENSEASG00005005484	USB1	100	86.792	Equus_asinus_asinus
ENSRROG00000029211	USB1	100	87.547	ENSECAG00000019493	USB1	91	87.547	Equus_caballus
ENSRROG00000029211	USB1	66	79.545	ENSEEUG00000000154	USB1	66	79.545	Erinaceus_europaeus
ENSRROG00000029211	USB1	92	48.193	ENSELUG00000010974	usb1	91	48.193	Esox_lucius
ENSRROG00000029211	USB1	100	86.517	ENSFCAG00000002693	USB1	100	86.517	Felis_catus
ENSRROG00000029211	USB1	85	67.257	ENSFALG00000006876	USB1	99	63.100	Ficedula_albicollis
ENSRROG00000029211	USB1	100	85.768	ENSFDAG00000010052	USB1	100	85.019	Fukomys_damarensis
ENSRROG00000029211	USB1	92	44.785	ENSFHEG00000012334	usb1	78	53.061	Fundulus_heteroclitus
ENSRROG00000029211	USB1	84	51.121	ENSGMOG00000004228	usb1	99	51.121	Gadus_morhua
ENSRROG00000029211	USB1	84	67.857	ENSGALG00000035604	USB1	100	63.158	Gallus_gallus
ENSRROG00000029211	USB1	98	49.091	ENSGAFG00000021890	usb1	82	52.632	Gambusia_affinis
ENSRROG00000029211	USB1	85	52.212	ENSGACG00000003257	usb1	81	52.212	Gasterosteus_aculeatus
ENSRROG00000029211	USB1	100	64.234	ENSGAGG00000022572	USB1	100	62.271	Gopherus_agassizii
ENSRROG00000029211	USB1	100	97.358	ENSGGOG00000017147	USB1	100	97.358	Gorilla_gorilla
ENSRROG00000029211	USB1	94	51.004	ENSHBUG00000009823	usb1	81	53.744	Haplochromis_burtoni
ENSRROG00000029211	USB1	100	86.517	ENSHGLG00000016078	USB1	98	85.768	Heterocephalus_glaber_female
ENSRROG00000029211	USB1	100	86.517	ENSHGLG00100005562	USB1	98	85.768	Heterocephalus_glaber_male
ENSRROG00000029211	USB1	82	54.839	ENSHCOG00000015633	usb1	86	54.709	Hippocampus_comes
ENSRROG00000029211	USB1	85	54.018	ENSIPUG00000008601	usb1	78	54.018	Ictalurus_punctatus
ENSRROG00000029211	USB1	100	84.672	ENSSTOG00000007548	USB1	100	84.249	Ictidomys_tridecemlineatus
ENSRROG00000029211	USB1	100	86.194	ENSJJAG00000021859	Usb1	100	85.393	Jaculus_jaculus
ENSRROG00000029211	USB1	86	53.304	ENSKMAG00000007200	usb1	80	53.304	Kryptolebias_marmoratus
ENSRROG00000029211	USB1	75	52.261	ENSLBEG00000008452	usb1	64	53.158	Labrus_bergylta
ENSRROG00000029211	USB1	91	54.286	ENSLACG00000000105	USB1	76	57.205	Latimeria_chalumnae
ENSRROG00000029211	USB1	95	53.360	ENSLOCG00000000465	usb1	82	56.522	Lepisosteus_oculatus
ENSRROG00000029211	USB1	100	64.945	ENSLAFG00000002267	USB1	100	65.185	Loxodonta_africana
ENSRROG00000029211	USB1	100	98.868	ENSMFAG00000003926	USB1	100	98.868	Macaca_fascicularis
ENSRROG00000029211	USB1	100	98.868	ENSMMUG00000022669	USB1	100	98.868	Macaca_mulatta
ENSRROG00000029211	USB1	100	98.734	ENSMNEG00000042487	USB1	100	98.734	Macaca_nemestrina
ENSRROG00000029211	USB1	100	98.868	ENSMLEG00000028756	USB1	100	98.868	Mandrillus_leucophaeus
ENSRROG00000029211	USB1	98	48.736	ENSMAMG00000015092	usb1	83	52.361	Mastacembelus_armatus
ENSRROG00000029211	USB1	94	50.201	ENSMZEG00005010008	usb1	80	53.097	Maylandia_zebra
ENSRROG00000029211	USB1	100	84.644	ENSMAUG00000007832	Usb1	100	83.895	Mesocricetus_auratus
ENSRROG00000029211	USB1	100	91.139	ENSMICG00000004900	USB1	100	91.139	Microcebus_murinus
ENSRROG00000029211	USB1	100	84.328	ENSMOCG00000022647	Usb1	100	83.146	Microtus_ochrogaster
ENSRROG00000029211	USB1	86	52.632	ENSMMOG00000000490	usb1	88	52.632	Mola_mola
ENSRROG00000029211	USB1	100	69.403	ENSMODG00000014067	USB1	100	67.537	Monodelphis_domestica
ENSRROG00000029211	USB1	95	49.801	ENSMALG00000005930	usb1	80	53.304	Monopterus_albus
ENSRROG00000029211	USB1	100	80.899	MGP_CAROLIEiJ_G0031421	Usb1	100	84.071	Mus_caroli
ENSRROG00000029211	USB1	100	81.273	ENSMUSG00000031792	Usb1	100	84.956	Mus_musculus
ENSRROG00000029211	USB1	100	81.648	MGP_PahariEiJ_G0023019	Usb1	100	85.470	Mus_pahari
ENSRROG00000029211	USB1	100	80.524	MGP_SPRETEiJ_G0032540	Usb1	100	79.775	Mus_spretus
ENSRROG00000029211	USB1	100	82.528	ENSMPUG00000004684	USB1	96	82.156	Mustela_putorius_furo
ENSRROG00000029211	USB1	87	89.177	ENSMLUG00000007400	USB1	100	89.177	Myotis_lucifugus
ENSRROG00000029211	USB1	100	84.074	ENSNGAG00000009703	Usb1	100	84.015	Nannospalax_galili
ENSRROG00000029211	USB1	87	52.093	ENSNBRG00000008747	usb1	99	53.960	Neolamprologus_brichardi
ENSRROG00000029211	USB1	100	94.304	ENSNLEG00000003340	USB1	100	97.600	Nomascus_leucogenys
ENSRROG00000029211	USB1	94	59.615	ENSMEUG00000003328	-	100	58.974	Notamacropus_eugenii
ENSRROG00000029211	USB1	75	78.814	ENSOPRG00000011803	USB1	72	87.879	Ochotona_princeps
ENSRROG00000029211	USB1	100	82.397	ENSODEG00000016214	USB1	100	81.648	Octodon_degus
ENSRROG00000029211	USB1	98	47.872	ENSONIG00000011063	usb1	81	53.304	Oreochromis_niloticus
ENSRROG00000029211	USB1	85	74.667	ENSOANG00000012118	USB1	94	74.667	Ornithorhynchus_anatinus
ENSRROG00000029211	USB1	94	47.791	ENSORLG00000012479	usb1	83	50.439	Oryzias_latipes
ENSRROG00000029211	USB1	94	48.193	ENSORLG00020018671	usb1	99	47.778	Oryzias_latipes_hni
ENSRROG00000029211	USB1	86	50.877	ENSORLG00015009679	usb1	84	50.877	Oryzias_latipes_hsok
ENSRROG00000029211	USB1	85	50.442	ENSOMEG00000012930	usb1	82	50.000	Oryzias_melastigma
ENSRROG00000029211	USB1	100	87.854	ENSOGAG00000003273	USB1	100	87.854	Otolemur_garnettii
ENSRROG00000029211	USB1	95	82.213	ENSOARG00000001107	USB1	93	84.362	Ovis_aries
ENSRROG00000029211	USB1	100	96.981	ENSPPAG00000042137	USB1	100	96.981	Pan_paniscus
ENSRROG00000029211	USB1	100	86.891	ENSPPRG00000024797	USB1	100	86.891	Panthera_pardus
ENSRROG00000029211	USB1	100	86.517	ENSPTIG00000007506	USB1	100	86.517	Panthera_tigris_altaica
ENSRROG00000029211	USB1	100	96.356	ENSPTRG00000008172	USB1	100	98.131	Pan_troglodytes
ENSRROG00000029211	USB1	100	98.868	ENSPANG00000025138	USB1	100	98.868	Papio_anubis
ENSRROG00000029211	USB1	93	53.629	ENSPKIG00000015109	usb1	82	53.498	Paramormyrops_kingsleyae
ENSRROG00000029211	USB1	85	54.425	ENSPSIG00000004305	USB1	100	54.425	Pelodiscus_sinensis
ENSRROG00000029211	USB1	84	52.466	ENSPMGG00000017725	usb1	85	52.466	Periophthalmus_magnuspinnatus
ENSRROG00000029211	USB1	100	83.150	ENSPEMG00000016183	Usb1	100	80.515	Peromyscus_maniculatus_bairdii
ENSRROG00000029211	USB1	89	49.367	ENSPMAG00000000462	usb1	100	49.367	Petromyzon_marinus
ENSRROG00000029211	USB1	98	48.913	ENSPFOG00000011130	usb1	82	52.193	Poecilia_formosa
ENSRROG00000029211	USB1	98	48.913	ENSPLAG00000009820	usb1	82	52.193	Poecilia_latipinna
ENSRROG00000029211	USB1	98	48.913	ENSPMEG00000006402	usb1	82	52.193	Poecilia_mexicana
ENSRROG00000029211	USB1	92	45.062	ENSPREG00000001047	usb1	79	53.571	Poecilia_reticulata
ENSRROG00000029211	USB1	95	93.651	ENSPPYG00000007401	USB1	100	93.651	Pongo_abelii
ENSRROG00000029211	USB1	100	93.671	ENSPCOG00000022612	USB1	100	93.671	Propithecus_coquereli
ENSRROG00000029211	USB1	100	81.509	ENSPVAG00000004613	USB1	100	81.509	Pteropus_vampyrus
ENSRROG00000029211	USB1	98	49.393	ENSPNYG00000022262	usb1	81	53.744	Pundamilia_nyererei
ENSRROG00000029211	USB1	85	52.232	ENSPNAG00000011736	usb1	76	52.232	Pygocentrus_nattereri
ENSRROG00000029211	USB1	100	83.521	ENSRNOG00000013216	Usb1	100	82.772	Rattus_norvegicus
ENSRROG00000029211	USB1	100	100.000	ENSRBIG00000044466	USB1	100	100.000	Rhinopithecus_bieti
ENSRROG00000029211	USB1	100	95.094	ENSSBOG00000029362	USB1	100	95.094	Saimiri_boliviensis_boliviensis
ENSRROG00000029211	USB1	83	73.973	ENSSHAG00000006993	USB1	96	70.492	Sarcophilus_harrisii
ENSRROG00000029211	USB1	94	54.000	ENSSFOG00015023663	usb1	76	55.372	Scleropages_formosus
ENSRROG00000029211	USB1	98	49.275	ENSSMAG00000015834	usb1	83	51.012	Scophthalmus_maximus
ENSRROG00000029211	USB1	85	55.357	ENSSDUG00000002949	usb1	83	55.357	Seriola_dumerili
ENSRROG00000029211	USB1	98	46.718	ENSSLDG00000014174	usb1	80	54.867	Seriola_lalandi_dorsalis
ENSRROG00000029211	USB1	81	69.626	ENSSPUG00000006741	USB1	100	69.626	Sphenodon_punctatus
ENSRROG00000029211	USB1	98	46.831	ENSSPAG00000007484	usb1	80	52.423	Stegastes_partitus
ENSRROG00000029211	USB1	100	84.015	ENSSSCG00000002807	USB1	100	84.387	Sus_scrofa
ENSRROG00000029211	USB1	80	70.283	ENSTGUG00000004792	USB1	92	66.109	Taeniopygia_guttata
ENSRROG00000029211	USB1	98	48.134	ENSTRUG00000021069	usb1	92	48.790	Takifugu_rubripes
ENSRROG00000029211	USB1	98	46.038	ENSTNIG00000000626	usb1	83	48.661	Tetraodon_nigroviridis
ENSRROG00000029211	USB1	88	62.069	ENSTBEG00000001507	USB1	100	62.069	Tupaia_belangeri
ENSRROG00000029211	USB1	100	84.015	ENSUAMG00000016823	USB1	100	84.387	Ursus_americanus
ENSRROG00000029211	USB1	81	88.318	ENSUMAG00000021369	USB1	100	88.318	Ursus_maritimus
ENSRROG00000029211	USB1	96	51.656	ENSVPAG00000009834	-	59	88.333	Vicugna_pacos
ENSRROG00000029211	USB1	99	83.582	ENSVVUG00000023700	USB1	93	86.307	Vulpes_vulpes
ENSRROG00000029211	USB1	82	55.505	ENSXETG00000013795	usb1	94	53.814	Xenopus_tropicalis
ENSRROG00000029211	USB1	86	52.632	ENSXMAG00000024687	usb1	67	52.632	Xiphophorus_maculatus