EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000029232 (Gene tree)
Gene ID: 104669842
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 9608 bases
Position: chrKN294410.1:405124-414731
Accession: 104669842
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000009600	PRP38	PF03371.15	2.5e-57	1	1
ENSRROP00000009607	PRP38	PF03371.15	1.2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000033698	PRPF38B-203	573	-	ENSRROP00000009607	190 (aa)	-	A0A2K6NZA4
ENSRROT00000033691	PRPF38B-201	3804	XM_010372957	ENSRROP00000009600	546 (aa)	XP_010371259	A0A2K6NZB4
ENSRROT00000033695	PRPF38B-202	660	-	ENSRROP00000009604	219 (aa)	-	A0A2K6NZ89

Gene Model

Click here to download ENSRROG00000029232's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000029232's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000029232	PRPF38B	100	98.352	ENSCJAG00000002510	-	100	98.352	Callithrix_jacchus
ENSRROG00000029232	PRPF38B	80	95.632	ENSTSYG00000029817	PRPF38B	97	95.487	Carlito_syrichta
ENSRROG00000029232	PRPF38B	100	100.000	ENSCCAG00000033941	-	100	100.000	Cebus_capucinus
ENSRROG00000029232	PRPF38B	100	99.451	ENSCSAG00000001531	PRPF38B	100	99.451	Chlorocebus_sabaeus
ENSRROG00000029232	PRPF38B	100	100.000	ENSCANG00000027711	PRPF38B	100	100.000	Colobus_angolensis_palliatus
ENSRROG00000029232	PRPF38B	100	98.535	ENSLAFG00000017112	PRPF38B	100	98.535	Loxodonta_africana
ENSRROG00000029232	PRPF38B	100	100.000	ENSMMUG00000010155	PRPF38B	100	100.000	Macaca_mulatta
ENSRROG00000029232	PRPF38B	100	100.000	ENSMNEG00000032003	-	100	100.000	Macaca_nemestrina
ENSRROG00000029232	PRPF38B	100	100.000	ENSMICG00000032109	PRPF38B	100	100.000	Microcebus_murinus
ENSRROG00000029232	PRPF38B	80	96.322	ENSODEG00000007646	PRPF38B	100	96.322	Octodon_degus
ENSRROG00000029232	PRPF38B	83	98.238	ENSOCUG00000027424	PRPF38B	100	98.238	Oryctolagus_cuniculus
ENSRROG00000029232	PRPF38B	100	98.901	ENSPPYG00000001092	PRPF38B	100	98.901	Pongo_abelii
ENSRROG00000029232	PRPF38B	100	100.000	ENSPCOG00000016051	PRPF38B	100	100.000	Propithecus_coquereli
ENSRROG00000029232	PRPF38B	100	100.000	ENSRBIG00000043351	PRPF38B	100	100.000	Rhinopithecus_bieti