EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000029278 (Gene tree)
Gene ID: 104665397
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 47395 bases
Position: chrKN296153.1:1230324-1277718
Accession: 104665397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000009766	RRM_5	PF13893.6	4.4e-07	1	1
ENSRROP00000009759	RRM_5	PF13893.6	4.6e-07	1	1
ENSRROP00000009765	RRM_5	PF13893.6	6.2e-07	1	1
ENSRROP00000009766	RRM_1	PF00076.22	5e-13	1	1
ENSRROP00000009765	RRM_1	PF00076.22	5e-13	1	1
ENSRROP00000009759	RRM_1	PF00076.22	5.2e-13	1	1
ENSRROP00000009767	SAP	PF02037.27	1.3e-10	1	1
ENSRROP00000009766	SAP	PF02037.27	1.4e-09	1	1
ENSRROP00000009765	SAP	PF02037.27	1.5e-09	1	1
ENSRROP00000009759	SAP	PF02037.27	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000033857	SAFB-202	2688	-	ENSRROP00000009765	895 (aa)	-	A0A2K6NZT5
ENSRROT00000033858	SAFB-203	2547	-	ENSRROP00000009766	848 (aa)	-	A0A2K6NZR3
ENSRROT00000033851	SAFB-201	4450	XM_010367216	ENSRROP00000009759	917 (aa)	XP_010365518	A0A2K6NZP5
ENSRROT00000033859	SAFB-204	321	-	ENSRROP00000009767	106 (aa)	-	A0A2K6NZR0

Gene Model

Click here to download ENSRROG00000029278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000029278's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000029278	SAFB	100	70.084	ENSRROG00000006606	SAFB2	98	69.742

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000029278	SAFB	100	100.000	ENSG00000160633	SAFB	100	100.000	Homo_sapiens
ENSRROG00000029278	SAFB	90	45.434	ENSAPOG00000022508	safb	65	43.062	Acanthochromis_polyacanthus
ENSRROG00000029278	SAFB	100	92.400	ENSAMEG00000012254	SAFB	98	92.308	Ailuropoda_melanoleuca
ENSRROG00000029278	SAFB	94	40.449	ENSACIG00000006247	safb	95	43.607	Amphilophus_citrinellus
ENSRROG00000029278	SAFB	92	44.340	ENSAOCG00000006308	safb	71	42.607	Amphiprion_ocellaris
ENSRROG00000029278	SAFB	90	45.035	ENSAPEG00000023342	safb	66	42.710	Amphiprion_percula
ENSRROG00000029278	SAFB	95	41.848	ENSATEG00000004998	safb	66	41.613	Anabas_testudineus
ENSRROG00000029278	SAFB	89	62.932	ENSAPLG00000006355	-	99	64.720	Anas_platyrhynchos
ENSRROG00000029278	SAFB	93	64.902	ENSAPLG00000005780	-	100	64.747	Anas_platyrhynchos
ENSRROG00000029278	SAFB	100	98.473	ENSANAG00000028821	SAFB	100	98.473	Aotus_nancymaae
ENSRROG00000029278	SAFB	95	42.047	ENSACLG00000001926	safb	64	42.763	Astatotilapia_calliptera
ENSRROG00000029278	SAFB	85	57.447	ENSAMXG00000018154	safb	94	44.283	Astyanax_mexicanus
ENSRROG00000029278	SAFB	100	89.216	ENSBTAG00000007875	SAFB	100	89.216	Bos_taurus
ENSRROG00000029278	SAFB	88	92.473	ENSBTAG00000051794	-	91	90.164	Bos_taurus
ENSRROG00000029278	SAFB	88	98.585	ENSCJAG00000017081	SAFB	100	99.254	Callithrix_jacchus
ENSRROG00000029278	SAFB	100	93.580	ENSCAFG00000018803	SAFB	87	93.580	Canis_familiaris
ENSRROG00000029278	SAFB	100	93.580	ENSCAFG00020018943	SAFB	100	93.580	Canis_lupus_dingo
ENSRROG00000029278	SAFB	100	87.800	ENSCHIG00000007262	SAFB	98	92.453	Capra_hircus
ENSRROG00000029278	SAFB	63	80.374	ENSTSYG00000001851	-	100	76.881	Carlito_syrichta
ENSRROG00000029278	SAFB	81	79.803	ENSCAPG00000012121	SAFB	77	83.417	Cavia_aperea
ENSRROG00000029278	SAFB	100	86.957	ENSCPOG00000026322	SAFB	100	87.169	Cavia_porcellus
ENSRROG00000029278	SAFB	100	99.057	ENSCCAG00000020193	SAFB	100	99.057	Cebus_capucinus
ENSRROG00000029278	SAFB	100	99.646	ENSCATG00000029994	SAFB	100	99.646	Cercocebus_atys
ENSRROG00000029278	SAFB	100	88.486	ENSCLAG00000007734	SAFB	100	89.232	Chinchilla_lanigera
ENSRROG00000029278	SAFB	100	99.455	ENSCSAG00000009949	SAFB	100	99.455	Chlorocebus_sabaeus
ENSRROG00000029278	SAFB	86	92.857	ENSCHOG00000003208	SAFB	93	92.857	Choloepus_hoffmanni
ENSRROG00000029278	SAFB	91	64.539	ENSCPBG00000010928	-	99	64.497	Chrysemys_picta_bellii
ENSRROG00000029278	SAFB	91	61.469	ENSCPBG00000010936	-	99	61.695	Chrysemys_picta_bellii
ENSRROG00000029278	SAFB	100	92.803	ENSCANG00000019754	-	100	92.694	Colobus_angolensis_palliatus
ENSRROG00000029278	SAFB	100	100.000	ENSCANG00000004774	-	100	100.000	Colobus_angolensis_palliatus
ENSRROG00000029278	SAFB	100	83.191	ENSCGRG00001002254	Safb	100	83.298	Cricetulus_griseus_chok1gshd
ENSRROG00000029278	SAFB	89	82.682	ENSCGRG00000011529	Safb	96	80.664	Cricetulus_griseus_crigri
ENSRROG00000029278	SAFB	93	43.441	ENSCSEG00000019870	safb	69	42.523	Cynoglossus_semilaevis
ENSRROG00000029278	SAFB	94	39.708	ENSCVAG00000002226	safb	94	39.716	Cyprinodon_variegatus
ENSRROG00000029278	SAFB	89	42.657	ENSDARG00000020467	safb	99	44.325	Danio_rerio
ENSRROG00000029278	SAFB	100	92.383	ENSDNOG00000015746	SAFB	95	92.846	Dasypus_novemcinctus
ENSRROG00000029278	SAFB	100	82.715	ENSDORG00000016200	Safb	100	83.051	Dipodomys_ordii
ENSRROG00000029278	SAFB	80	84.286	ENSETEG00000018679	SAFB	85	84.286	Echinops_telfairi
ENSRROG00000029278	SAFB	100	88.841	ENSEASG00005023019	SAFB	100	89.057	Equus_asinus_asinus
ENSRROG00000029278	SAFB	100	90.850	ENSECAG00000018659	SAFB	89	91.176	Equus_caballus
ENSRROG00000029278	SAFB	83	54.444	ENSELUG00000022327	safb	69	51.534	Esox_lucius
ENSRROG00000029278	SAFB	100	93.471	ENSFCAG00000011835	SAFB	100	93.471	Felis_catus
ENSRROG00000029278	SAFB	90	60.714	ENSFALG00000013881	-	99	61.781	Ficedula_albicollis
ENSRROG00000029278	SAFB	100	64.876	ENSFALG00000013882	-	89	64.784	Ficedula_albicollis
ENSRROG00000029278	SAFB	100	83.333	ENSFDAG00000020306	SAFB	100	88.594	Fukomys_damarensis
ENSRROG00000029278	SAFB	94	37.727	ENSFHEG00000004219	safb	94	41.637	Fundulus_heteroclitus
ENSRROG00000029278	SAFB	73	57.692	ENSGMOG00000014280	safb	95	41.432	Gadus_morhua
ENSRROG00000029278	SAFB	100	64.516	ENSGALG00000013365	-	97	64.889	Gallus_gallus
ENSRROG00000029278	SAFB	100	61.660	ENSGALG00000001948	-	97	63.152	Gallus_gallus
ENSRROG00000029278	SAFB	94	38.428	ENSGAFG00000016162	safb	67	39.092	Gambusia_affinis
ENSRROG00000029278	SAFB	95	42.043	ENSGACG00000011385	safb	67	40.600	Gasterosteus_aculeatus
ENSRROG00000029278	SAFB	78	59.259	ENSGAGG00000017702	-	100	58.027	Gopherus_agassizii
ENSRROG00000029278	SAFB	95	62.608	ENSGAGG00000008424	-	97	63.293	Gopherus_agassizii
ENSRROG00000029278	SAFB	100	100.000	ENSGGOG00000015109	SAFB	100	100.000	Gorilla_gorilla
ENSRROG00000029278	SAFB	95	39.976	ENSHBUG00000009218	safb	70	42.757	Haplochromis_burtoni
ENSRROG00000029278	SAFB	100	90.374	ENSHGLG00000015883	SAFB	100	90.481	Heterocephalus_glaber_female
ENSRROG00000029278	SAFB	100	84.783	ENSHGLG00100004228	SAFB	77	89.417	Heterocephalus_glaber_male
ENSRROG00000029278	SAFB	85	38.155	ENSHCOG00000001705	safb	96	40.471	Hippocampus_comes
ENSRROG00000029278	SAFB	86	60.000	ENSIPUG00000024869	safb2	97	46.367	Ictalurus_punctatus
ENSRROG00000029278	SAFB	93	90.011	ENSSTOG00000002783	SAFB	100	90.471	Ictidomys_tridecemlineatus
ENSRROG00000029278	SAFB	100	84.820	ENSJJAG00000009021	Safb	100	85.775	Jaculus_jaculus
ENSRROG00000029278	SAFB	90	44.046	ENSKMAG00000022308	safb	95	42.857	Kryptolebias_marmoratus
ENSRROG00000029278	SAFB	95	41.838	ENSLBEG00000006015	safb	65	44.246	Labrus_bergylta
ENSRROG00000029278	SAFB	64	59.420	ENSLACG00000018090	SAFB	100	54.355	Latimeria_chalumnae
ENSRROG00000029278	SAFB	97	47.154	ENSLOCG00000003613	safb	90	58.407	Lepisosteus_oculatus
ENSRROG00000029278	SAFB	99	90.860	ENSLAFG00000003840	SAFB	100	89.663	Loxodonta_africana
ENSRROG00000029278	SAFB	100	99.673	ENSMFAG00000003885	SAFB	100	99.673	Macaca_fascicularis
ENSRROG00000029278	SAFB	100	99.646	ENSMMUG00000017970	SAFB	100	99.646	Macaca_mulatta
ENSRROG00000029278	SAFB	100	99.057	ENSMNEG00000035637	SAFB	100	99.057	Macaca_nemestrina
ENSRROG00000029278	SAFB	100	99.057	ENSMLEG00000038637	SAFB	100	99.057	Mandrillus_leucophaeus
ENSRROG00000029278	SAFB	95	41.011	ENSMAMG00000003357	safb	60	41.117	Mastacembelus_armatus
ENSRROG00000029278	SAFB	95	42.186	ENSMZEG00005009120	safb	66	43.222	Maylandia_zebra
ENSRROG00000029278	SAFB	88	60.638	ENSMGAG00000001051	-	97	60.870	Meleagris_gallopavo
ENSRROG00000029278	SAFB	96	64.382	ENSMGAG00000001101	-	100	63.434	Meleagris_gallopavo
ENSRROG00000029278	SAFB	57	90.574	ENSMAUG00000005013	Safb	100	90.574	Mesocricetus_auratus
ENSRROG00000029278	SAFB	88	92.473	ENSMICG00000046795	-	98	92.553	Microcebus_murinus
ENSRROG00000029278	SAFB	99	86.667	ENSMICG00000034927	-	77	96.739	Microcebus_murinus
ENSRROG00000029278	SAFB	100	92.697	ENSMICG00000008739	-	100	91.873	Microcebus_murinus
ENSRROG00000029278	SAFB	100	83.723	ENSMOCG00000014040	Safb	100	83.830	Microtus_ochrogaster
ENSRROG00000029278	SAFB	75	56.098	ENSMMOG00000020366	-	65	52.381	Mola_mola
ENSRROG00000029278	SAFB	100	74.920	ENSMODG00000001236	SAFB	98	75.926	Monodelphis_domestica
ENSRROG00000029278	SAFB	92	41.796	ENSMALG00000020330	safb	70	41.287	Monopterus_albus
ENSRROG00000029278	SAFB	100	83.634	MGP_CAROLIEiJ_G0021780	Safb	100	84.060	Mus_caroli
ENSRROG00000029278	SAFB	100	83.741	ENSMUSG00000071054	Safb	100	84.166	Mus_musculus
ENSRROG00000029278	SAFB	100	83.227	MGP_PahariEiJ_G0020769	Safb	100	83.970	Mus_pahari
ENSRROG00000029278	SAFB	100	92.927	ENSMPUG00000006123	SAFB	94	92.927	Mustela_putorius_furo
ENSRROG00000029278	SAFB	100	91.186	ENSMLUG00000001081	SAFB	100	91.295	Myotis_lucifugus
ENSRROG00000029278	SAFB	100	81.568	ENSNGAG00000019882	Safb	100	81.886	Nannospalax_galili
ENSRROG00000029278	SAFB	75	54.651	ENSNBRG00000000496	-	81	54.651	Neolamprologus_brichardi
ENSRROG00000029278	SAFB	96	99.544	ENSNLEG00000013551	SAFB	100	99.544	Nomascus_leucogenys
ENSRROG00000029278	SAFB	88	85.381	ENSOPRG00000011561	-	100	85.627	Ochotona_princeps
ENSRROG00000029278	SAFB	100	90.299	ENSODEG00000014838	SAFB	100	90.405	Octodon_degus
ENSRROG00000029278	SAFB	95	42.308	ENSONIG00000002318	safb	66	43.296	Oreochromis_niloticus
ENSRROG00000029278	SAFB	90	81.753	ENSOCUG00000014628	SAFB	64	86.415	Oryctolagus_cuniculus
ENSRROG00000029278	SAFB	90	42.087	ENSORLG00000016989	safb	64	40.266	Oryzias_latipes
ENSRROG00000029278	SAFB	94	42.910	ENSORLG00020000404	safb	70	41.930	Oryzias_latipes_hni
ENSRROG00000029278	SAFB	94	42.205	ENSORLG00015010733	safb	64	40.433	Oryzias_latipes_hsok
ENSRROG00000029278	SAFB	95	39.154	ENSOMEG00000009066	safb	65	40.097	Oryzias_melastigma
ENSRROG00000029278	SAFB	100	91.215	ENSOGAG00000027769	SAFB	100	90.564	Otolemur_garnettii
ENSRROG00000029278	SAFB	100	85.310	ENSOARG00000007662	-	100	84.766	Ovis_aries
ENSRROG00000029278	SAFB	78	82.657	ENSOARG00000007856	-	100	82.378	Ovis_aries
ENSRROG00000029278	SAFB	100	100.000	ENSPPAG00000035129	SAFB	100	100.000	Pan_paniscus
ENSRROG00000029278	SAFB	100	93.471	ENSPPRG00000017197	SAFB	100	93.471	Panthera_pardus
ENSRROG00000029278	SAFB	100	100.000	ENSPTRG00000010335	SAFB	100	100.000	Pan_troglodytes
ENSRROG00000029278	SAFB	100	99.564	ENSPANG00000007770	SAFB	100	99.564	Papio_anubis
ENSRROG00000029278	SAFB	90	44.444	ENSPKIG00000009902	safb	67	45.997	Paramormyrops_kingsleyae
ENSRROG00000029278	SAFB	99	61.789	ENSPSIG00000009367	-	97	61.147	Pelodiscus_sinensis
ENSRROG00000029278	SAFB	100	61.789	ENSPSIG00000011679	-	100	63.472	Pelodiscus_sinensis
ENSRROG00000029278	SAFB	75	60.241	ENSPMGG00000015973	-	61	61.972	Periophthalmus_magnuspinnatus
ENSRROG00000029278	SAFB	100	84.009	ENSPEMG00000020428	Safb	100	84.435	Peromyscus_maniculatus_bairdii
ENSRROG00000029278	SAFB	63	81.215	ENSPCIG00000009504	-	99	82.200	Phascolarctos_cinereus
ENSRROG00000029278	SAFB	94	39.616	ENSPFOG00000007745	safb	94	41.388	Poecilia_formosa
ENSRROG00000029278	SAFB	94	38.833	ENSPLAG00000001614	safb	95	39.977	Poecilia_latipinna
ENSRROG00000029278	SAFB	94	39.503	ENSPMEG00000021023	safb	98	41.333	Poecilia_mexicana
ENSRROG00000029278	SAFB	93	39.420	ENSPREG00000012496	safb	95	40.995	Poecilia_reticulata
ENSRROG00000029278	SAFB	100	99.346	ENSPPYG00000009428	SAFB	100	99.346	Pongo_abelii
ENSRROG00000029278	SAFB	100	86.782	ENSPCAG00000006475	SAFB	100	86.782	Procavia_capensis
ENSRROG00000029278	SAFB	100	88.850	ENSPCOG00000014090	SAFB	100	88.498	Propithecus_coquereli
ENSRROG00000029278	SAFB	100	87.736	ENSPCOG00000010436	-	94	87.736	Propithecus_coquereli
ENSRROG00000029278	SAFB	100	86.431	ENSPVAG00000004913	SAFB	100	84.548	Pteropus_vampyrus
ENSRROG00000029278	SAFB	93	45.283	ENSPNAG00000021838	safb	97	45.344	Pygocentrus_nattereri
ENSRROG00000029278	SAFB	100	83.881	ENSRNOG00000050543	Safb	100	84.517	Rattus_norvegicus
ENSRROG00000029278	SAFB	100	100.000	ENSRBIG00000042509	SAFB	100	100.000	Rhinopithecus_bieti
ENSRROG00000029278	SAFB	100	99.057	ENSSBOG00000026291	SAFB	100	99.057	Saimiri_boliviensis_boliviensis
ENSRROG00000029278	SAFB	95	44.647	ENSSFOG00015008156	safb	95	46.696	Scleropages_formosus
ENSRROG00000029278	SAFB	95	41.062	ENSSMAG00000009316	safb	66	42.155	Scophthalmus_maximus
ENSRROG00000029278	SAFB	95	41.367	ENSSDUG00000009652	safb	72	41.680	Seriola_dumerili
ENSRROG00000029278	SAFB	95	43.587	ENSSLDG00000001670	safb	65	42.147	Seriola_lalandi_dorsalis
ENSRROG00000029278	SAFB	93	85.280	ENSSARG00000010475	SAFB	100	85.280	Sorex_araneus
ENSRROG00000029278	SAFB	87	59.125	ENSSPUG00000009747	-	99	58.405	Sphenodon_punctatus
ENSRROG00000029278	SAFB	93	41.810	ENSSPAG00000015682	safb	79	45.223	Stegastes_partitus
ENSRROG00000029278	SAFB	100	92.473	ENSSSCG00000013522	SAFB	99	93.967	Sus_scrofa
ENSRROG00000029278	SAFB	96	63.870	ENSTGUG00000000502	-	97	64.977	Taeniopygia_guttata
ENSRROG00000029278	SAFB	93	61.547	ENSTGUG00000000489	-	97	64.671	Taeniopygia_guttata
ENSRROG00000029278	SAFB	75	58.537	ENSTRUG00000003567	safb	95	42.975	Takifugu_rubripes
ENSRROG00000029278	SAFB	87	56.322	ENSTNIG00000015470	safb	90	56.322	Tetraodon_nigroviridis
ENSRROG00000029278	SAFB	68	100.000	ENSTBEG00000013124	-	66	90.977	Tupaia_belangeri
ENSRROG00000029278	SAFB	94	98.413	ENSTTRG00000013588	SAFB	92	98.413	Tursiops_truncatus
ENSRROG00000029278	SAFB	85	90.150	ENSUAMG00000024543	SAFB	100	90.150	Ursus_americanus
ENSRROG00000029278	SAFB	92	92.233	ENSUAMG00000024667	-	88	92.233	Ursus_americanus
ENSRROG00000029278	SAFB	88	97.849	ENSUMAG00000009734	SAFB	97	91.465	Ursus_maritimus
ENSRROG00000029278	SAFB	73	93.077	ENSVPAG00000012043	SAFB	79	93.077	Vicugna_pacos
ENSRROG00000029278	SAFB	100	93.580	ENSVVUG00000013720	SAFB	87	93.580	Vulpes_vulpes
ENSRROG00000029278	SAFB	81	62.069	ENSXETG00000008755	safb	91	62.385	Xenopus_tropicalis
ENSRROG00000029278	SAFB	78	55.294	ENSXCOG00000010246	-	66	62.687	Xiphophorus_couchianus
ENSRROG00000029278	SAFB	95	39.383	ENSXMAG00000003458	safb	94	41.617	Xiphophorus_maculatus