EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000029488 (Gene tree)
Gene ID: 104664626
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 62263 bases
Position: chrKN294269.1:446057-508319
Accession: 104664626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000010187	RRM_1	PF00076.22	4.8e-09	1	1
ENSRROP00000010181	RRM_1	PF00076.22	4.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000034278	SCAF4-201	4084	XM_010366178	ENSRROP00000010181	1145 (aa)	XP_010364480	A0A2K6P0X3
ENSRROT00000034284	SCAF4-202	3342	-	ENSRROP00000010187	1102 (aa)	-	A0A2K6P0Y9

Gene Model

Click here to download ENSRROG00000029488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000029488's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000029488	SCAF4	100	98.867	ENSG00000156304	SCAF4	100	98.867	Homo_sapiens
ENSRROG00000029488	SCAF4	79	52.615	ENSAPOG00000002946	scaf4a	55	58.912	Acanthochromis_polyacanthus
ENSRROG00000029488	SCAF4	75	93.848	ENSAMEG00000014987	SCAF4	96	94.572	Ailuropoda_melanoleuca
ENSRROG00000029488	SCAF4	79	53.469	ENSAOCG00000000615	scaf4a	55	58.610	Amphiprion_ocellaris
ENSRROG00000029488	SCAF4	69	57.031	ENSAPEG00000021229	scaf4a	55	58.459	Amphiprion_percula
ENSRROG00000029488	SCAF4	99	75.718	ENSAPLG00000002509	SCAF4	59	83.180	Anas_platyrhynchos
ENSRROG00000029488	SCAF4	96	68.707	ENSACAG00000002569	SCAF4	52	84.146	Anolis_carolinensis
ENSRROG00000029488	SCAF4	100	98.084	ENSANAG00000037494	SCAF4	100	98.084	Aotus_nancymaae
ENSRROG00000029488	SCAF4	93	50.090	ENSAMXG00000008585	scaf4a	60	63.102	Astyanax_mexicanus
ENSRROG00000029488	SCAF4	100	93.112	ENSBTAG00000018855	SCAF4	100	93.200	Bos_taurus
ENSRROG00000029488	SCAF4	100	98.000	ENSCJAG00000008993	SCAF4	100	98.000	Callithrix_jacchus
ENSRROG00000029488	SCAF4	99	94.190	ENSCAFG00000008863	SCAF4	99	94.102	Canis_familiaris
ENSRROG00000029488	SCAF4	99	92.131	ENSCAFG00020026019	SCAF4	100	93.478	Canis_lupus_dingo
ENSRROG00000029488	SCAF4	100	92.528	ENSCHIG00000008385	SCAF4	100	92.615	Capra_hircus
ENSRROG00000029488	SCAF4	92	94.917	ENSTSYG00000011344	SCAF4	99	95.800	Carlito_syrichta
ENSRROG00000029488	SCAF4	100	89.828	ENSCPOG00000012443	SCAF4	100	89.828	Cavia_porcellus
ENSRROG00000029488	SCAF4	100	98.342	ENSCCAG00000033727	SCAF4	100	98.342	Cebus_capucinus
ENSRROG00000029488	SCAF4	100	98.872	ENSCATG00000030379	SCAF4	100	98.872	Cercocebus_atys
ENSRROG00000029488	SCAF4	99	91.580	ENSCLAG00000006298	SCAF4	100	91.927	Chinchilla_lanigera
ENSRROG00000029488	SCAF4	100	98.784	ENSCSAG00000009438	SCAF4	100	98.784	Chlorocebus_sabaeus
ENSRROG00000029488	SCAF4	100	99.476	ENSCANG00000029847	SCAF4	100	99.476	Colobus_angolensis_palliatus
ENSRROG00000029488	SCAF4	99	83.333	ENSCGRG00001020821	Scaf4	100	82.601	Cricetulus_griseus_chok1gshd
ENSRROG00000029488	SCAF4	99	83.111	ENSCGRG00000014360	Scaf4	99	86.248	Cricetulus_griseus_crigri
ENSRROG00000029488	SCAF4	79	52.492	ENSCSEG00000019549	scaf4a	53	55.387	Cynoglossus_semilaevis
ENSRROG00000029488	SCAF4	58	55.822	ENSCSEG00000012808	-	64	60.766	Cynoglossus_semilaevis
ENSRROG00000029488	SCAF4	100	90.917	ENSDNOG00000019014	SCAF4	94	91.004	Dasypus_novemcinctus
ENSRROG00000029488	SCAF4	96	80.668	ENSETEG00000000583	SCAF4	99	80.126	Echinops_telfairi
ENSRROG00000029488	SCAF4	100	94.585	ENSEASG00005007756	SCAF4	100	94.764	Equus_asinus_asinus
ENSRROG00000029488	SCAF4	100	94.498	ENSECAG00000014248	SCAF4	100	94.852	Equus_caballus
ENSRROG00000029488	SCAF4	59	52.703	ENSELUG00000002779	SCAF8	69	68.116	Esox_lucius
ENSRROG00000029488	SCAF4	100	94.107	ENSFCAG00000002228	SCAF4	100	94.107	Felis_catus
ENSRROG00000029488	SCAF4	99	89.896	ENSFDAG00000017780	SCAF4	100	89.896	Fukomys_damarensis
ENSRROG00000029488	SCAF4	100	76.756	ENSGALG00000033965	SCAF4	59	83.257	Gallus_gallus
ENSRROG00000029488	SCAF4	91	95.730	ENSGGOG00000015557	SCAF4	100	99.085	Gorilla_gorilla
ENSRROG00000029488	SCAF4	100	91.113	ENSHGLG00000010582	SCAF4	100	91.544	Heterocephalus_glaber_female
ENSRROG00000029488	SCAF4	99	91.004	ENSHGLG00100009441	SCAF4	100	91.441	Heterocephalus_glaber_male
ENSRROG00000029488	SCAF4	99	87.625	ENSSTOG00000004450	SCAF4	100	87.423	Ictidomys_tridecemlineatus
ENSRROG00000029488	SCAF4	99	89.564	ENSJJAG00000019447	Scaf4	99	89.534	Jaculus_jaculus
ENSRROG00000029488	SCAF4	99	60.601	ENSLACG00000013913	SCAF4	59	69.592	Latimeria_chalumnae
ENSRROG00000029488	SCAF4	95	57.793	ENSLOCG00000009162	scaf4a	59	67.804	Lepisosteus_oculatus
ENSRROG00000029488	SCAF4	99	93.188	ENSLAFG00000010710	SCAF4	100	93.777	Loxodonta_africana
ENSRROG00000029488	SCAF4	100	98.701	ENSMFAG00000037668	SCAF4	100	98.701	Macaca_fascicularis
ENSRROG00000029488	SCAF4	100	98.615	ENSMMUG00000001712	SCAF4	100	98.615	Macaca_mulatta
ENSRROG00000029488	SCAF4	100	98.616	ENSMNEG00000032966	SCAF4	100	98.616	Macaca_nemestrina
ENSRROG00000029488	SCAF4	100	98.108	ENSMLEG00000039674	SCAF4	100	98.863	Mandrillus_leucophaeus
ENSRROG00000029488	SCAF4	99	76.501	ENSMGAG00000014515	SCAF4	59	83.767	Meleagris_gallopavo
ENSRROG00000029488	SCAF4	99	88.879	ENSMAUG00000013307	Scaf4	100	88.977	Mesocricetus_auratus
ENSRROG00000029488	SCAF4	100	97.293	ENSMICG00000005256	SCAF4	100	97.293	Microcebus_murinus
ENSRROG00000029488	SCAF4	100	86.285	ENSMOCG00000012087	Scaf4	95	92.458	Microtus_ochrogaster
ENSRROG00000029488	SCAF4	100	85.105	ENSMODG00000021040	SCAF4	100	84.321	Monodelphis_domestica
ENSRROG00000029488	SCAF4	100	84.000	MGP_CAROLIEiJ_G0020944	Scaf4	95	90.593	Mus_caroli
ENSRROG00000029488	SCAF4	100	83.620	ENSMUSG00000022983	Scaf4	95	90.155	Mus_musculus
ENSRROG00000029488	SCAF4	100	82.549	MGP_PahariEiJ_G0016649	Scaf4	100	86.410	Mus_pahari
ENSRROG00000029488	SCAF4	100	84.236	MGP_SPRETEiJ_G0021850	Scaf4	100	86.667	Mus_spretus
ENSRROG00000029488	SCAF4	100	92.468	ENSMPUG00000001078	SCAF4	100	92.554	Mustela_putorius_furo
ENSRROG00000029488	SCAF4	99	77.852	ENSMLUG00000011472	SCAF4	79	83.315	Myotis_lucifugus
ENSRROG00000029488	SCAF4	99	90.949	ENSNGAG00000005214	Scaf4	99	90.885	Nannospalax_galili
ENSRROG00000029488	SCAF4	100	98.779	ENSNLEG00000003569	SCAF4	100	98.779	Nomascus_leucogenys
ENSRROG00000029488	SCAF4	83	95.652	ENSOPRG00000007016	SCAF4	77	90.217	Ochotona_princeps
ENSRROG00000029488	SCAF4	100	89.726	ENSODEG00000002718	SCAF4	100	89.812	Octodon_degus
ENSRROG00000029488	SCAF4	71	58.808	ENSONIG00000004687	scaf4a	51	73.780	Oreochromis_niloticus
ENSRROG00000029488	SCAF4	100	89.014	ENSOCUG00000008336	SCAF4	100	89.706	Oryctolagus_cuniculus
ENSRROG00000029488	SCAF4	52	57.480	ENSORLG00000003420	scaf4b	67	58.650	Oryzias_latipes
ENSRROG00000029488	SCAF4	99	96.207	ENSOGAG00000014653	SCAF4	94	96.207	Otolemur_garnettii
ENSRROG00000029488	SCAF4	99	91.937	ENSOARG00000013894	SCAF4	99	91.558	Ovis_aries
ENSRROG00000029488	SCAF4	100	98.867	ENSPPAG00000028535	SCAF4	100	98.867	Pan_paniscus
ENSRROG00000029488	SCAF4	99	94.133	ENSPPRG00000000635	SCAF4	100	94.133	Panthera_pardus
ENSRROG00000029488	SCAF4	99	91.461	ENSPTIG00000021578	SCAF4	99	89.474	Panthera_tigris_altaica
ENSRROG00000029488	SCAF4	100	98.867	ENSPTRG00000013848	SCAF4	100	98.867	Pan_troglodytes
ENSRROG00000029488	SCAF4	100	98.788	ENSPANG00000017332	SCAF4	100	98.788	Papio_anubis
ENSRROG00000029488	SCAF4	64	64.248	ENSPKIG00000022408	scaf4a	90	66.667	Paramormyrops_kingsleyae
ENSRROG00000029488	SCAF4	99	77.193	ENSPSIG00000014242	SCAF4	57	84.675	Pelodiscus_sinensis
ENSRROG00000029488	SCAF4	61	87.231	ENSPCIG00000028183	SCAF4	91	82.379	Phascolarctos_cinereus
ENSRROG00000029488	SCAF4	100	98.955	ENSPPYG00000011355	SCAF4	100	98.955	Pongo_abelii
ENSRROG00000029488	SCAF4	100	96.177	ENSPCOG00000018710	SCAF4	100	96.177	Propithecus_coquereli
ENSRROG00000029488	SCAF4	100	93.450	ENSPVAG00000005220	SCAF4	100	93.450	Pteropus_vampyrus
ENSRROG00000029488	SCAF4	76	57.593	ENSPNAG00000016892	scaf4a	60	63.922	Pygocentrus_nattereri
ENSRROG00000029488	SCAF4	98	86.400	ENSRNOG00000002104	Scaf4	95	86.041	Rattus_norvegicus
ENSRROG00000029488	SCAF4	100	96.112	ENSRBIG00000040007	SCAF4	99	96.842	Rhinopithecus_bieti
ENSRROG00000029488	SCAF4	100	84.468	ENSSHAG00000001581	SCAF4	100	83.421	Sarcophilus_harrisii
ENSRROG00000029488	SCAF4	91	46.800	ENSSFOG00015006338	scaf4a	54	57.856	Scleropages_formosus
ENSRROG00000029488	SCAF4	66	58.065	ENSSMAG00000003738	scaf4b	54	71.519	Scophthalmus_maximus
ENSRROG00000029488	SCAF4	80	53.454	ENSSMAG00000017901	scaf4a	53	53.666	Scophthalmus_maximus
ENSRROG00000029488	SCAF4	57	61.290	ENSSDUG00000012380	scaf4b	54	70.886	Seriola_dumerili
ENSRROG00000029488	SCAF4	57	61.290	ENSSLDG00000023152	-	54	70.886	Seriola_lalandi_dorsalis
ENSRROG00000029488	SCAF4	100	89.524	ENSSARG00000009994	SCAF4	100	89.610	Sorex_araneus
ENSRROG00000029488	SCAF4	100	90.768	ENSSSCG00000021023	SCAF4	100	91.113	Sus_scrofa
ENSRROG00000029488	SCAF4	74	72.354	ENSTGUG00000013464	SCAF4	57	85.714	Taeniopygia_guttata
ENSRROG00000029488	SCAF4	51	58.099	ENSTRUG00000009536	-	66	57.604	Takifugu_rubripes
ENSRROG00000029488	SCAF4	99	92.775	ENSTTRG00000010963	SCAF4	100	92.775	Tursiops_truncatus
ENSRROG00000029488	SCAF4	100	91.965	ENSUAMG00000008860	SCAF4	100	91.972	Ursus_americanus
ENSRROG00000029488	SCAF4	99	91.512	ENSUMAG00000016962	SCAF4	100	92.314	Ursus_maritimus
ENSRROG00000029488	SCAF4	99	94.253	ENSVVUG00000002953	SCAF4	100	94.164	Vulpes_vulpes
ENSRROG00000029488	SCAF4	99	55.806	ENSXETG00000007351	scaf4	63	66.762	Xenopus_tropicalis