EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000029554 (Gene tree)
Gene ID: 104661670
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 22684 bases
Position: chrKN295350.1:565099-587782
Accession: 104661670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000010425	ResIII	PF04851.15	2.9e-08	1	1
ENSRROP00000010410	ResIII	PF04851.15	3e-08	1	1
ENSRROP00000010420	ResIII	PF04851.15	3e-08	1	1
ENSRROP00000010407	ResIII	PF04851.15	3.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000034518	CHD3-203	5949	-	ENSRROP00000010420	1982 (aa)	-	A0A2K6P1L5
ENSRROT00000034505	CHD3-201	6045	-	ENSRROP00000010407	2014 (aa)	-	A0A2K6P1K4
ENSRROT00000034532	CHD3-205	1230	-	ENSRROP00000010434	409 (aa)	-	A0A2K6P1M5
ENSRROT00000034523	CHD3-204	5562	XM_010362400	ENSRROP00000010425	1853 (aa)	XP_010360702	A0A2K6P1M2
ENSRROT00000034508	CHD3-202	5901	XM_010362401	ENSRROP00000010410	1966 (aa)	XP_010360703	A0A2K6P1K6

Gene Model

Click here to download ENSRROG00000029554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000029554's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000029554	CHD3	96	69.329	ENSRROG00000042446	-	96	70.086
ENSRROG00000029554	CHD3	95	67.908	ENSRROG00000041146	CHD5	97	68.699

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000029554	CHD3	100	99.695	ENSG00000170004	CHD3	100	99.695	Homo_sapiens
ENSRROG00000029554	CHD3	86	80.208	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSRROG00000029554	CHD3	75	94.329	ENSAMEG00000003025	-	100	94.881	Ailuropoda_melanoleuca
ENSRROG00000029554	CHD3	89	76.844	ENSACIG00000019671	chd3	99	83.516	Amphilophus_citrinellus
ENSRROG00000029554	CHD3	91	81.100	ENSAOCG00000023784	chd3	97	81.250	Amphiprion_ocellaris
ENSRROG00000029554	CHD3	91	80.756	ENSAPEG00000006341	chd3	95	77.728	Amphiprion_percula
ENSRROG00000029554	CHD3	91	81.315	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSRROG00000029554	CHD3	99	83.769	ENSACAG00000004276	CHD3	96	84.309	Anolis_carolinensis
ENSRROG00000029554	CHD3	99	97.149	ENSANAG00000034323	CHD3	99	97.548	Aotus_nancymaae
ENSRROG00000029554	CHD3	93	78.816	ENSACLG00000009222	chd3	99	74.699	Astatotilapia_calliptera
ENSRROG00000029554	CHD3	100	96.237	ENSBTAG00000014377	CHD3	97	96.603	Bos_taurus
ENSRROG00000029554	CHD3	99	99.287	ENSCJAG00000014766	CHD3	99	99.287	Callithrix_jacchus
ENSRROG00000029554	CHD3	100	96.285	ENSCAFG00000016859	CHD3	100	96.202	Canis_familiaris
ENSRROG00000029554	CHD3	99	96.075	ENSCAFG00020007422	CHD3	99	98.264	Canis_lupus_dingo
ENSRROG00000029554	CHD3	100	96.586	ENSCHIG00000016737	CHD3	100	96.903	Capra_hircus
ENSRROG00000029554	CHD3	100	98.932	ENSTSYG00000035658	CHD3	100	98.932	Carlito_syrichta
ENSRROG00000029554	CHD3	100	93.424	ENSCAPG00000014864	CHD3	99	93.126	Cavia_aperea
ENSRROG00000029554	CHD3	100	95.934	ENSCPOG00000022653	CHD3	99	95.635	Cavia_porcellus
ENSRROG00000029554	CHD3	100	97.450	ENSCCAG00000034792	CHD3	100	97.450	Cebus_capucinus
ENSRROG00000029554	CHD3	100	100.000	ENSCATG00000041717	CHD3	100	100.000	Cercocebus_atys
ENSRROG00000029554	CHD3	98	98.448	ENSCLAG00000010523	CHD3	100	98.448	Chinchilla_lanigera
ENSRROG00000029554	CHD3	100	97.589	ENSCSAG00000011122	CHD3	100	98.042	Chlorocebus_sabaeus
ENSRROG00000029554	CHD3	92	84.655	ENSCPBG00000011966	CHD3	99	87.784	Chrysemys_picta_bellii
ENSRROG00000029554	CHD3	100	99.898	ENSCANG00000037641	CHD3	100	99.898	Colobus_angolensis_palliatus
ENSRROG00000029554	CHD3	98	97.673	ENSCGRG00001011306	Chd3	100	97.673	Cricetulus_griseus_chok1gshd
ENSRROG00000029554	CHD3	94	97.727	ENSCGRG00000007878	Chd3	99	97.794	Cricetulus_griseus_crigri
ENSRROG00000029554	CHD3	92	79.605	ENSCSEG00000004489	chd3	99	76.090	Cynoglossus_semilaevis
ENSRROG00000029554	CHD3	89	82.072	ENSCVAG00000007293	chd3	95	82.661	Cyprinodon_variegatus
ENSRROG00000029554	CHD3	92	81.119	ENSDARG00000021405	chd3	99	77.530	Danio_rerio
ENSRROG00000029554	CHD3	100	81.859	ENSDNOG00000047846	CHD3	98	82.300	Dasypus_novemcinctus
ENSRROG00000029554	CHD3	98	97.930	ENSDORG00000010713	Chd3	100	97.930	Dipodomys_ordii
ENSRROG00000029554	CHD3	98	91.099	ENSETEG00000017733	CHD3	100	90.513	Echinops_telfairi
ENSRROG00000029554	CHD3	54	75.357	ENSEBUG00000008310	chd3	99	69.186	Eptatretus_burgeri
ENSRROG00000029554	CHD3	99	96.452	ENSEASG00005019360	CHD3	100	96.999	Equus_asinus_asinus
ENSRROG00000029554	CHD3	99	96.505	ENSECAG00000010051	CHD3	100	96.999	Equus_caballus
ENSRROG00000029554	CHD3	93	98.305	ENSEEUG00000015205	CHD3	92	100.000	Erinaceus_europaeus
ENSRROG00000029554	CHD3	83	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSRROG00000029554	CHD3	100	96.084	ENSFCAG00000009629	CHD3	96	96.496	Felis_catus
ENSRROG00000029554	CHD3	99	96.129	ENSFDAG00000008220	CHD3	99	93.918	Fukomys_damarensis
ENSRROG00000029554	CHD3	89	80.305	ENSGMOG00000013599	chd3	91	80.914	Gadus_morhua
ENSRROG00000029554	CHD3	58	76.966	ENSGAFG00000004055	chd3	99	76.496	Gambusia_affinis
ENSRROG00000029554	CHD3	99	70.840	ENSGACG00000019275	chd3	100	70.831	Gasterosteus_aculeatus
ENSRROG00000029554	CHD3	82	83.519	ENSGAGG00000013164	CHD3	98	87.101	Gopherus_agassizii
ENSRROG00000029554	CHD3	100	99.542	ENSGGOG00000013496	CHD3	100	99.542	Gorilla_gorilla
ENSRROG00000029554	CHD3	98	98.398	ENSHGLG00000012017	CHD3	99	96.285	Heterocephalus_glaber_female
ENSRROG00000029554	CHD3	90	90.668	ENSHGLG00100013902	CHD3	99	91.006	Heterocephalus_glaber_male
ENSRROG00000029554	CHD3	96	72.615	ENSHCOG00000010170	chd3	96	72.959	Hippocampus_comes
ENSRROG00000029554	CHD3	90	78.631	ENSIPUG00000003271	chd3	96	79.050	Ictalurus_punctatus
ENSRROG00000029554	CHD3	98	98.965	ENSSTOG00000025907	CHD3	100	98.965	Ictidomys_tridecemlineatus
ENSRROG00000029554	CHD3	98	97.672	ENSJJAG00000017633	Chd3	100	97.672	Jaculus_jaculus
ENSRROG00000029554	CHD3	87	90.047	ENSKMAG00000019292	chd3	97	75.795	Kryptolebias_marmoratus
ENSRROG00000029554	CHD3	95	70.706	ENSLBEG00000028485	chd3	92	81.008	Labrus_bergylta
ENSRROG00000029554	CHD3	98	73.593	ENSLACG00000008031	CHD3	99	74.324	Latimeria_chalumnae
ENSRROG00000029554	CHD3	99	76.883	ENSLOCG00000013965	chd3	97	77.174	Lepisosteus_oculatus
ENSRROG00000029554	CHD3	96	92.360	ENSLAFG00000000572	CHD3	100	92.846	Loxodonta_africana
ENSRROG00000029554	CHD3	100	99.949	ENSMFAG00000020113	CHD3	100	99.949	Macaca_fascicularis
ENSRROG00000029554	CHD3	100	96.723	ENSMMUG00000022221	CHD3	100	96.723	Macaca_mulatta
ENSRROG00000029554	CHD3	100	99.949	ENSMNEG00000001728	CHD3	100	99.949	Macaca_nemestrina
ENSRROG00000029554	CHD3	100	100.000	ENSMLEG00000032249	CHD3	100	100.000	Mandrillus_leucophaeus
ENSRROG00000029554	CHD3	86	80.729	ENSMAMG00000000564	chd3	99	77.243	Mastacembelus_armatus
ENSRROG00000029554	CHD3	99	97.020	ENSMAUG00000013873	Chd3	96	97.020	Mesocricetus_auratus
ENSRROG00000029554	CHD3	100	96.737	ENSMICG00000008741	CHD3	100	93.918	Microcebus_murinus
ENSRROG00000029554	CHD3	98	97.771	ENSMOCG00000004848	Chd3	100	97.771	Microtus_ochrogaster
ENSRROG00000029554	CHD3	98	73.497	ENSMMOG00000012699	chd3	99	74.015	Mola_mola
ENSRROG00000029554	CHD3	99	90.543	ENSMODG00000007509	CHD3	100	94.667	Monodelphis_domestica
ENSRROG00000029554	CHD3	98	97.523	MGP_CAROLIEiJ_G0016564	Chd3	100	97.614	Mus_caroli
ENSRROG00000029554	CHD3	98	97.523	ENSMUSG00000018474	Chd3	99	97.614	Mus_musculus
ENSRROG00000029554	CHD3	98	97.625	MGP_PahariEiJ_G0017695	Chd3	100	97.719	Mus_pahari
ENSRROG00000029554	CHD3	98	97.523	MGP_SPRETEiJ_G0017400	Chd3	100	97.614	Mus_spretus
ENSRROG00000029554	CHD3	93	95.697	ENSMPUG00000008861	CHD3	100	96.149	Mustela_putorius_furo
ENSRROG00000029554	CHD3	100	95.407	ENSMLUG00000014643	-	100	95.407	Myotis_lucifugus
ENSRROG00000029554	CHD3	100	96.034	ENSNGAG00000000773	Chd3	99	95.869	Nannospalax_galili
ENSRROG00000029554	CHD3	92	73.911	ENSNBRG00000000636	chd3	98	75.899	Neolamprologus_brichardi
ENSRROG00000029554	CHD3	98	96.781	ENSNLEG00000009770	CHD3	100	96.781	Nomascus_leucogenys
ENSRROG00000029554	CHD3	86	91.078	ENSMEUG00000005852	CHD3	87	91.484	Notamacropus_eugenii
ENSRROG00000029554	CHD3	99	94.513	ENSOPRG00000011069	CHD3	100	95.353	Ochotona_princeps
ENSRROG00000029554	CHD3	100	96.084	ENSODEG00000017785	CHD3	100	96.030	Octodon_degus
ENSRROG00000029554	CHD3	98	75.258	ENSONIG00000009292	chd3	100	74.845	Oreochromis_niloticus
ENSRROG00000029554	CHD3	99	91.725	ENSOCUG00000029299	CHD3	100	92.014	Oryctolagus_cuniculus
ENSRROG00000029554	CHD3	85	69.557	ENSORLG00000007107	chd3	93	71.789	Oryzias_latipes
ENSRROG00000029554	CHD3	56	75.315	ENSORLG00020008387	chd3	95	73.698	Oryzias_latipes_hni
ENSRROG00000029554	CHD3	76	78.316	ENSOMEG00000013691	chd3	99	78.188	Oryzias_melastigma
ENSRROG00000029554	CHD3	100	96.285	ENSOGAG00000003216	CHD3	100	96.650	Otolemur_garnettii
ENSRROG00000029554	CHD3	100	94.185	ENSOARG00000017855	CHD3	99	94.176	Ovis_aries
ENSRROG00000029554	CHD3	100	98.663	ENSPPAG00000032886	CHD3	100	98.663	Pan_paniscus
ENSRROG00000029554	CHD3	99	97.711	ENSPPRG00000000626	CHD3	99	97.711	Panthera_pardus
ENSRROG00000029554	CHD3	100	99.746	ENSPTRG00000008714	CHD3	100	99.746	Pan_troglodytes
ENSRROG00000029554	CHD3	100	98.300	ENSPANG00000023938	CHD3	100	98.300	Papio_anubis
ENSRROG00000029554	CHD3	99	75.039	ENSPKIG00000006305	chd3	99	79.254	Paramormyrops_kingsleyae
ENSRROG00000029554	CHD3	58	90.602	ENSPSIG00000010177	CHD3	98	90.876	Pelodiscus_sinensis
ENSRROG00000029554	CHD3	100	95.384	ENSPEMG00000014262	Chd3	100	95.461	Peromyscus_maniculatus_bairdii
ENSRROG00000029554	CHD3	99	93.289	ENSPCIG00000005442	CHD3	97	95.935	Phascolarctos_cinereus
ENSRROG00000029554	CHD3	94	71.631	ENSPFOG00000012464	chd3	86	80.135	Poecilia_formosa
ENSRROG00000029554	CHD3	89	83.534	ENSPLAG00000002887	chd3	96	83.534	Poecilia_latipinna
ENSRROG00000029554	CHD3	53	81.374	ENSPMEG00000016725	chd3	94	73.247	Poecilia_mexicana
ENSRROG00000029554	CHD3	91	84.502	ENSPREG00000011044	chd3	99	77.532	Poecilia_reticulata
ENSRROG00000029554	CHD3	99	94.459	ENSPPYG00000007940	CHD3	100	93.129	Pongo_abelii
ENSRROG00000029554	CHD3	96	97.750	ENSPCAG00000004350	CHD3	96	97.575	Procavia_capensis
ENSRROG00000029554	CHD3	98	99.069	ENSPCOG00000020952	CHD3	100	96.653	Propithecus_coquereli
ENSRROG00000029554	CHD3	86	98.796	ENSPVAG00000016344	CHD3	87	94.857	Pteropus_vampyrus
ENSRROG00000029554	CHD3	95	77.999	ENSPNAG00000020393	chd3	98	81.611	Pygocentrus_nattereri
ENSRROG00000029554	CHD3	99	94.364	ENSRNOG00000009722	Chd3	100	95.153	Rattus_norvegicus
ENSRROG00000029554	CHD3	100	98.363	ENSRBIG00000033562	CHD3	100	98.363	Rhinopithecus_bieti
ENSRROG00000029554	CHD3	100	99.237	ENSSBOG00000020719	CHD3	100	99.237	Saimiri_boliviensis_boliviensis
ENSRROG00000029554	CHD3	98	94.912	ENSSHAG00000014412	CHD3	100	94.912	Sarcophilus_harrisii
ENSRROG00000029554	CHD3	94	79.140	ENSSFOG00015023123	chd3	98	75.360	Scleropages_formosus
ENSRROG00000029554	CHD3	86	91.304	ENSSMAG00000006451	chd3	99	77.117	Scophthalmus_maximus
ENSRROG00000029554	CHD3	54	75.025	ENSSDUG00000005792	chd3	95	73.535	Seriola_dumerili
ENSRROG00000029554	CHD3	94	77.379	ENSSPAG00000013694	chd3	99	78.107	Stegastes_partitus
ENSRROG00000029554	CHD3	100	96.237	ENSSSCG00000021363	CHD3	100	96.510	Sus_scrofa
ENSRROG00000029554	CHD3	78	73.849	ENSTRUG00000014990	chd3	89	76.269	Takifugu_rubripes
ENSRROG00000029554	CHD3	99	72.703	ENSTNIG00000012998	chd3	99	73.337	Tetraodon_nigroviridis
ENSRROG00000029554	CHD3	68	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSRROG00000029554	CHD3	99	100.000	ENSTTRG00000010295	CHD3	97	99.383	Tursiops_truncatus
ENSRROG00000029554	CHD3	99	94.912	ENSUAMG00000005475	CHD3	100	94.912	Ursus_americanus
ENSRROG00000029554	CHD3	60	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSRROG00000029554	CHD3	99	96.075	ENSVVUG00000028011	CHD3	99	96.484	Vulpes_vulpes
ENSRROG00000029554	CHD3	99	72.540	ENSXETG00000012991	chd3	92	73.762	Xenopus_tropicalis
ENSRROG00000029554	CHD3	52	82.751	ENSXCOG00000000809	chd3	96	82.976	Xiphophorus_couchianus
ENSRROG00000029554	CHD3	88	82.967	ENSXMAG00000016035	chd3	99	82.967	Xiphophorus_maculatus