EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000029794 (Gene tree)
Gene ID: 104675462
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 52106 bases
Position: chrKN298155.1:4162933-4215038
Accession: 104675462
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000010850	ResIII	PF04851.15	5.9e-07	1	1
ENSRROP00000010849	ResIII	PF04851.15	9.3e-07	1	1
ENSRROP00000010848	ResIII	PF04851.15	9.5e-07	1	1
ENSRROP00000010847	ResIII	PF04851.15	9.6e-07	1	1
ENSRROP00000010850	DEAD	PF00270.29	7.3e-50	1	1
ENSRROP00000010849	DEAD	PF00270.29	9.5e-50	1	1
ENSRROP00000010848	DEAD	PF00270.29	9.7e-50	1	1
ENSRROP00000010847	DEAD	PF00270.29	9.9e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000034947	DDX42-202	2799	-	ENSRROP00000010848	932 (aa)	-	A0A2K6P2V1
ENSRROT00000034946	DDX42-201	6867	XM_010380039	ENSRROP00000010847	937 (aa)	XP_010378341	A0A2K6P2T4
ENSRROT00000034949	DDX42-204	2457	XM_010380040	ENSRROP00000010850	818 (aa)	XP_010378342	A0A2K6P2U2
ENSRROT00000034948	DDX42-203	2778	-	ENSRROP00000010849	925 (aa)	-	A0A2K6P2V8

Gene Model

Click here to download ENSRROG00000029794's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000029794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000029794	DDX42	52	36.937	ENSRROG00000036763	DDX3Y	70	35.920
ENSRROG00000029794	DDX42	55	38.298	ENSRROG00000035750	DDX41	80	35.660
ENSRROG00000029794	DDX42	55	33.043	ENSRROG00000042119	DDX59	73	33.043
ENSRROG00000029794	DDX42	52	43.880	ENSRROG00000045378	DDX17	87	43.750
ENSRROG00000029794	DDX42	66	38.104	ENSRROG00000000127	DDX5	84	41.042
ENSRROG00000029794	DDX42	60	43.651	ENSRROG00000029467	DDX46	50	43.452
ENSRROG00000029794	DDX42	54	37.389	ENSRROG00000031424	DDX43	68	37.389

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000029794	DDX42	100	99.254	ENSG00000198231	DDX42	100	100.000	Homo_sapiens
ENSRROG00000029794	DDX42	93	74.658	ENSAPOG00000017675	ddx42	97	74.463	Acanthochromis_polyacanthus
ENSRROG00000029794	DDX42	100	96.684	ENSAMEG00000003200	DDX42	100	96.684	Ailuropoda_melanoleuca
ENSRROG00000029794	DDX42	97	70.361	ENSACIG00000007376	ddx42	99	72.877	Amphilophus_citrinellus
ENSRROG00000029794	DDX42	100	70.907	ENSAOCG00000003520	ddx42	99	72.152	Amphiprion_ocellaris
ENSRROG00000029794	DDX42	100	71.399	ENSAPEG00000000984	ddx42	99	72.352	Amphiprion_percula
ENSRROG00000029794	DDX42	99	71.970	ENSATEG00000022920	ddx42	99	72.930	Anabas_testudineus
ENSRROG00000029794	DDX42	100	84.656	ENSAPLG00000010544	DDX42	100	84.656	Anas_platyrhynchos
ENSRROG00000029794	DDX42	100	84.402	ENSACAG00000003994	DDX42	99	84.739	Anolis_carolinensis
ENSRROG00000029794	DDX42	100	98.401	ENSANAG00000035693	DDX42	100	98.401	Aotus_nancymaae
ENSRROG00000029794	DDX42	92	75.610	ENSACLG00000025113	ddx42	99	73.106	Astatotilapia_calliptera
ENSRROG00000029794	DDX42	77	83.994	ENSAMXG00000011435	ddx42	99	70.382	Astyanax_mexicanus
ENSRROG00000029794	DDX42	100	94.338	ENSBTAG00000021058	DDX42	100	94.872	Bos_taurus
ENSRROG00000029794	DDX42	72	52.532	WBGene00008119	C46F11.4	78	52.895	Caenorhabditis_elegans
ENSRROG00000029794	DDX42	100	98.294	ENSCJAG00000019649	DDX42	99	99.477	Callithrix_jacchus
ENSRROG00000029794	DDX42	100	96.253	ENSCAFG00000012818	DDX42	100	96.253	Canis_familiaris
ENSRROG00000029794	DDX42	100	96.360	ENSCAFG00020026631	DDX42	100	96.360	Canis_lupus_dingo
ENSRROG00000029794	DDX42	100	95.527	ENSCHIG00000014431	DDX42	100	95.527	Capra_hircus
ENSRROG00000029794	DDX42	100	95.080	ENSTSYG00000001380	DDX42	100	95.080	Carlito_syrichta
ENSRROG00000029794	DDX42	83	75.592	ENSCAPG00000013621	DDX42	94	75.592	Cavia_aperea
ENSRROG00000029794	DDX42	100	95.172	ENSCPOG00000005633	DDX42	100	95.279	Cavia_porcellus
ENSRROG00000029794	DDX42	99	97.912	ENSCCAG00000020612	DDX42	100	97.912	Cebus_capucinus
ENSRROG00000029794	DDX42	100	99.787	ENSCATG00000030490	DDX42	100	99.787	Cercocebus_atys
ENSRROG00000029794	DDX42	100	96.133	ENSCLAG00000003497	DDX42	100	96.133	Chinchilla_lanigera
ENSRROG00000029794	DDX42	100	96.072	ENSCSAG00000003914	DDX42	100	96.072	Chlorocebus_sabaeus
ENSRROG00000029794	DDX42	79	95.495	ENSCHOG00000006241	DDX42	79	95.495	Choloepus_hoffmanni
ENSRROG00000029794	DDX42	100	84.503	ENSCPBG00000026682	DDX42	100	84.559	Chrysemys_picta_bellii
ENSRROG00000029794	DDX42	55	66.368	ENSCING00000001837	-	94	67.991	Ciona_intestinalis
ENSRROG00000029794	DDX42	100	99.893	ENSCANG00000034663	DDX42	100	99.893	Colobus_angolensis_palliatus
ENSRROG00000029794	DDX42	100	94.946	ENSCGRG00001009775	Ddx42	100	95.054	Cricetulus_griseus_chok1gshd
ENSRROG00000029794	DDX42	100	94.946	ENSCGRG00000011718	Ddx42	100	95.054	Cricetulus_griseus_crigri
ENSRROG00000029794	DDX42	92	73.225	ENSCSEG00000021574	ddx42	99	69.158	Cynoglossus_semilaevis
ENSRROG00000029794	DDX42	100	70.213	ENSCVAG00000011404	ddx42	99	72.009	Cyprinodon_variegatus
ENSRROG00000029794	DDX42	100	89.339	ENSDNOG00000007961	DDX42	100	89.339	Dasypus_novemcinctus
ENSRROG00000029794	DDX42	99	90.610	ENSDORG00000004199	Ddx42	100	87.353	Dipodomys_ordii
ENSRROG00000029794	DDX42	68	62.324	FBgn0036104	CG6418	87	56.133	Drosophila_melanogaster
ENSRROG00000029794	DDX42	80	73.342	ENSEBUG00000001155	ddx42	91	73.210	Eptatretus_burgeri
ENSRROG00000029794	DDX42	100	96.699	ENSEASG00005013089	DDX42	100	96.699	Equus_asinus_asinus
ENSRROG00000029794	DDX42	100	96.699	ENSECAG00000022684	DDX42	100	96.699	Equus_caballus
ENSRROG00000029794	DDX42	67	100.000	ENSEEUG00000009144	DDX42	85	100.000	Erinaceus_europaeus
ENSRROG00000029794	DDX42	100	70.222	ENSELUG00000020593	ddx42	100	70.886	Esox_lucius
ENSRROG00000029794	DDX42	100	97.109	ENSFCAG00000003499	DDX42	100	97.109	Felis_catus
ENSRROG00000029794	DDX42	95	85.552	ENSFALG00000004675	DDX42	74	88.228	Ficedula_albicollis
ENSRROG00000029794	DDX42	100	95.815	ENSFDAG00000020516	DDX42	100	95.815	Fukomys_damarensis
ENSRROG00000029794	DDX42	99	69.386	ENSFHEG00000023290	ddx42	99	71.050	Fundulus_heteroclitus
ENSRROG00000029794	DDX42	76	78.279	ENSGMOG00000004595	ddx42	88	78.279	Gadus_morhua
ENSRROG00000029794	DDX42	100	83.264	ENSGALG00000000581	DDX42	100	83.577	Gallus_gallus
ENSRROG00000029794	DDX42	91	74.793	ENSGAFG00000011846	ddx42	95	74.074	Gambusia_affinis
ENSRROG00000029794	DDX42	99	68.099	ENSGACG00000009782	ddx42	99	68.240	Gasterosteus_aculeatus
ENSRROG00000029794	DDX42	100	84.260	ENSGAGG00000024411	DDX42	99	84.211	Gopherus_agassizii
ENSRROG00000029794	DDX42	100	99.254	ENSGGOG00000006779	DDX42	100	99.254	Gorilla_gorilla
ENSRROG00000029794	DDX42	92	75.842	ENSHBUG00000008705	ddx42	99	73.319	Haplochromis_burtoni
ENSRROG00000029794	DDX42	100	91.505	ENSHGLG00000010024	DDX42	100	91.505	Heterocephalus_glaber_female
ENSRROG00000029794	DDX42	100	95.931	ENSHGLG00100004479	-	100	95.931	Heterocephalus_glaber_male
ENSRROG00000029794	DDX42	99	72.650	ENSHGLG00100007138	-	95	73.134	Heterocephalus_glaber_male
ENSRROG00000029794	DDX42	84	78.479	ENSHCOG00000003357	ddx42	96	75.336	Hippocampus_comes
ENSRROG00000029794	DDX42	81	79.894	ENSIPUG00000013327	ddx42	100	70.032	Ictalurus_punctatus
ENSRROG00000029794	DDX42	100	96.599	ENSSTOG00000008922	DDX42	100	96.599	Ictidomys_tridecemlineatus
ENSRROG00000029794	DDX42	100	95.059	ENSJJAG00000011727	Ddx42	100	95.059	Jaculus_jaculus
ENSRROG00000029794	DDX42	99	69.789	ENSKMAG00000009914	ddx42	99	71.970	Kryptolebias_marmoratus
ENSRROG00000029794	DDX42	82	76.823	ENSLBEG00000004687	ddx42	99	67.553	Labrus_bergylta
ENSRROG00000029794	DDX42	99	76.849	ENSLACG00000013476	DDX42	97	78.341	Latimeria_chalumnae
ENSRROG00000029794	DDX42	100	74.892	ENSLOCG00000011764	ddx42	100	75.108	Lepisosteus_oculatus
ENSRROG00000029794	DDX42	100	96.043	ENSLAFG00000003249	DDX42	100	96.043	Loxodonta_africana
ENSRROG00000029794	DDX42	100	99.787	ENSMFAG00000031356	DDX42	100	99.787	Macaca_fascicularis
ENSRROG00000029794	DDX42	100	99.360	ENSMMUG00000016762	DDX42	100	99.756	Macaca_mulatta
ENSRROG00000029794	DDX42	100	99.787	ENSMNEG00000038250	DDX42	100	99.787	Macaca_nemestrina
ENSRROG00000029794	DDX42	100	99.893	ENSMLEG00000043080	DDX42	100	99.893	Mandrillus_leucophaeus
ENSRROG00000029794	DDX42	92	76.601	ENSMAMG00000021888	ddx42	98	71.458	Mastacembelus_armatus
ENSRROG00000029794	DDX42	92	75.610	ENSMZEG00005023103	ddx42	99	73.106	Maylandia_zebra
ENSRROG00000029794	DDX42	100	83.682	ENSMGAG00000001822	DDX42	100	83.787	Meleagris_gallopavo
ENSRROG00000029794	DDX42	86	96.591	ENSMAUG00000020774	-	94	96.591	Mesocricetus_auratus
ENSRROG00000029794	DDX42	100	96.802	ENSMICG00000009952	DDX42	100	96.771	Microcebus_murinus
ENSRROG00000029794	DDX42	100	94.409	ENSMOCG00000015504	Ddx42	100	94.409	Microtus_ochrogaster
ENSRROG00000029794	DDX42	92	71.163	ENSMMOG00000016963	ddx42	86	71.330	Mola_mola
ENSRROG00000029794	DDX42	50	97.859	ENSMODG00000009917	-	98	97.859	Monodelphis_domestica
ENSRROG00000029794	DDX42	99	71.809	ENSMALG00000007800	ddx42	99	72.950	Monopterus_albus
ENSRROG00000029794	DDX42	100	95.806	MGP_CAROLIEiJ_G0017314	Ddx42	100	95.914	Mus_caroli
ENSRROG00000029794	DDX42	100	95.806	ENSMUSG00000020705	Ddx42	100	95.914	Mus_musculus
ENSRROG00000029794	DDX42	77	99.254	MGP_PahariEiJ_G0018444	-	100	99.254	Mus_pahari
ENSRROG00000029794	DDX42	100	95.914	MGP_SPRETEiJ_G0018158	Ddx42	100	96.022	Mus_spretus
ENSRROG00000029794	DDX42	100	96.596	ENSMPUG00000014921	DDX42	100	96.596	Mustela_putorius_furo
ENSRROG00000029794	DDX42	100	94.858	ENSMLUG00000011645	DDX42	100	94.858	Myotis_lucifugus
ENSRROG00000029794	DDX42	100	96.013	ENSNGAG00000021897	Ddx42	100	96.013	Nannospalax_galili
ENSRROG00000029794	DDX42	99	70.074	ENSNBRG00000004466	ddx42	99	71.825	Neolamprologus_brichardi
ENSRROG00000029794	DDX42	100	99.147	ENSNLEG00000004248	DDX42	100	99.147	Nomascus_leucogenys
ENSRROG00000029794	DDX42	85	82.616	ENSMEUG00000013227	-	85	82.616	Notamacropus_eugenii
ENSRROG00000029794	DDX42	100	94.692	ENSOPRG00000014960	DDX42	100	94.692	Ochotona_princeps
ENSRROG00000029794	DDX42	100	92.589	ENSODEG00000007810	DDX42	100	92.589	Octodon_degus
ENSRROG00000029794	DDX42	99	71.338	ENSONIG00000000734	ddx42	99	73.212	Oreochromis_niloticus
ENSRROG00000029794	DDX42	66	91.993	ENSOANG00000000265	DDX42	100	92.022	Ornithorhynchus_anatinus
ENSRROG00000029794	DDX42	97	94.923	ENSOCUG00000004304	DDX42	89	94.923	Oryctolagus_cuniculus
ENSRROG00000029794	DDX42	100	70.137	ENSORLG00000002395	ddx42	100	70.276	Oryzias_latipes
ENSRROG00000029794	DDX42	100	70.675	ENSORLG00020011621	ddx42	100	71.882	Oryzias_latipes_hni
ENSRROG00000029794	DDX42	100	70.719	ENSORLG00015004487	ddx42	100	71.670	Oryzias_latipes_hsok
ENSRROG00000029794	DDX42	92	74.707	ENSOMEG00000020093	ddx42	100	71.593	Oryzias_melastigma
ENSRROG00000029794	DDX42	100	96.174	ENSOGAG00000006872	DDX42	100	96.174	Otolemur_garnettii
ENSRROG00000029794	DDX42	100	94.198	ENSOARG00000013540	DDX42	100	94.726	Ovis_aries
ENSRROG00000029794	DDX42	100	99.467	ENSPPAG00000007496	DDX42	100	99.467	Pan_paniscus
ENSRROG00000029794	DDX42	100	97.002	ENSPPRG00000002740	DDX42	100	97.002	Panthera_pardus
ENSRROG00000029794	DDX42	100	96.895	ENSPTIG00000009932	DDX42	100	96.895	Panthera_tigris_altaica
ENSRROG00000029794	DDX42	100	99.467	ENSPTRG00000009523	DDX42	100	99.467	Pan_troglodytes
ENSRROG00000029794	DDX42	100	99.787	ENSPANG00000020990	DDX42	100	99.787	Papio_anubis
ENSRROG00000029794	DDX42	100	69.362	ENSPKIG00000002901	ddx42	99	71.075	Paramormyrops_kingsleyae
ENSRROG00000029794	DDX42	86	91.801	ENSPSIG00000010289	DDX42	98	91.502	Pelodiscus_sinensis
ENSRROG00000029794	DDX42	100	67.199	ENSPMGG00000009323	ddx42	100	68.684	Periophthalmus_magnuspinnatus
ENSRROG00000029794	DDX42	100	95.166	ENSPEMG00000006755	Ddx42	100	95.274	Peromyscus_maniculatus_bairdii
ENSRROG00000029794	DDX42	80	72.441	ENSPMAG00000005580	ddx42	100	73.097	Petromyzon_marinus
ENSRROG00000029794	DDX42	100	91.852	ENSPCIG00000009093	DDX42	100	91.534	Phascolarctos_cinereus
ENSRROG00000029794	DDX42	100	69.801	ENSPFOG00000014104	ddx42	99	71.728	Poecilia_formosa
ENSRROG00000029794	DDX42	100	69.801	ENSPLAG00000010522	ddx42	99	71.728	Poecilia_latipinna
ENSRROG00000029794	DDX42	100	70.126	ENSPMEG00000010744	ddx42	99	71.878	Poecilia_mexicana
ENSRROG00000029794	DDX42	100	69.207	ENSPREG00000009926	ddx42	99	71.354	Poecilia_reticulata
ENSRROG00000029794	DDX42	100	96.921	ENSPPYG00000008531	DDX42	100	96.921	Pongo_abelii
ENSRROG00000029794	DDX42	99	89.120	ENSPCAG00000002474	DDX42	100	89.663	Procavia_capensis
ENSRROG00000029794	DDX42	100	87.259	ENSPCOG00000001559	DDX42	99	88.517	Propithecus_coquereli
ENSRROG00000029794	DDX42	99	93.162	ENSPVAG00000000160	DDX42	100	92.021	Pteropus_vampyrus
ENSRROG00000029794	DDX42	84	75.180	ENSPNYG00000013954	ddx42	97	70.366	Pundamilia_nyererei
ENSRROG00000029794	DDX42	76	83.866	ENSPNAG00000017352	ddx42	99	69.525	Pygocentrus_nattereri
ENSRROG00000029794	DDX42	100	95.376	ENSRNOG00000009474	Ddx42	100	95.484	Rattus_norvegicus
ENSRROG00000029794	DDX42	100	99.893	ENSRBIG00000004781	DDX42	100	99.893	Rhinopithecus_bieti
ENSRROG00000029794	DDX42	100	98.401	ENSSBOG00000029624	DDX42	100	98.401	Saimiri_boliviensis_boliviensis
ENSRROG00000029794	DDX42	81	61.573	ENSSHAG00000007919	-	99	61.128	Sarcophilus_harrisii
ENSRROG00000029794	DDX42	100	92.169	ENSSHAG00000012896	-	100	91.852	Sarcophilus_harrisii
ENSRROG00000029794	DDX42	84	80.128	ENSSFOG00015014064	ddx42	83	80.128	Scleropages_formosus
ENSRROG00000029794	DDX42	99	71.030	ENSSMAG00000009077	ddx42	99	71.795	Scophthalmus_maximus
ENSRROG00000029794	DDX42	99	71.902	ENSSDUG00000022221	ddx42	99	71.816	Seriola_dumerili
ENSRROG00000029794	DDX42	99	71.737	ENSSLDG00000018483	ddx42	99	71.792	Seriola_lalandi_dorsalis
ENSRROG00000029794	DDX42	100	95.208	ENSSARG00000009847	DDX42	100	95.208	Sorex_araneus
ENSRROG00000029794	DDX42	100	84.534	ENSSPUG00000018806	DDX42	100	84.746	Sphenodon_punctatus
ENSRROG00000029794	DDX42	93	75.115	ENSSPAG00000013055	ddx42	99	72.275	Stegastes_partitus
ENSRROG00000029794	DDX42	98	93.951	ENSSSCG00000017289	DDX42	97	94.789	Sus_scrofa
ENSRROG00000029794	DDX42	100	83.613	ENSTGUG00000001931	DDX42	100	83.613	Taeniopygia_guttata
ENSRROG00000029794	DDX42	99	70.386	ENSTRUG00000010711	ddx42	99	81.556	Takifugu_rubripes
ENSRROG00000029794	DDX42	82	93.421	ENSTBEG00000010159	DDX42	99	93.421	Tupaia_belangeri
ENSRROG00000029794	DDX42	100	96.261	ENSTTRG00000006962	DDX42	100	96.261	Tursiops_truncatus
ENSRROG00000029794	DDX42	100	96.257	ENSUAMG00000007321	DDX42	100	96.257	Ursus_americanus
ENSRROG00000029794	DDX42	100	95.615	ENSUMAG00000017438	DDX42	100	95.615	Ursus_maritimus
ENSRROG00000029794	DDX42	100	87.487	ENSVPAG00000009633	DDX42	100	87.487	Vicugna_pacos
ENSRROG00000029794	DDX42	100	96.574	ENSVVUG00000006095	DDX42	100	96.574	Vulpes_vulpes
ENSRROG00000029794	DDX42	100	76.440	ENSXETG00000003245	ddx42	100	76.440	Xenopus_tropicalis
ENSRROG00000029794	DDX42	97	69.738	ENSXCOG00000017560	ddx42	97	71.879	Xiphophorus_couchianus
ENSRROG00000029794	DDX42	100	70.675	ENSXMAG00000008138	ddx42	99	72.601	Xiphophorus_maculatus