EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000029989 (Gene tree)
Gene ID: 104678890
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 3701 bases
Position: chrKN298755.1:4442241-4445941
Accession: 104678890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000011277	RRM_1	PF00076.22	1.6e-32	1	2
ENSRROP00000011277	RRM_1	PF00076.22	1.6e-32	2	2
ENSRROP00000011281	RRM_1	PF00076.22	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000035383	SRSF6-202	408	-	ENSRROP00000011281	135 (aa)	-	A0A2K6P419
ENSRROT00000035379	SRSF6-201	1538	XM_010384301	ENSRROP00000011277	343 (aa)	XP_010382603	A0A2K6P417

Gene Model

Click here to download ENSRROG00000029989's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03040	Spliceosome	KEGG
rro05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000029989's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000029989	SRSF6	53	36.709	ENSRROG00000041167	-	82	37.500
ENSRROG00000029989	SRSF6	53	32.877	ENSRROG00000023925	RALYL	69	35.294
ENSRROG00000029989	SRSF6	50	71.642	ENSRROG00000043407	SRSF5	86	62.295
ENSRROG00000029989	SRSF6	75	30.693	ENSRROG00000044302	RBM14	59	32.143
ENSRROG00000029989	SRSF6	56	48.101	ENSRROG00000005080	SRSF7	58	48.101
ENSRROG00000029989	SRSF6	56	46.835	ENSRROG00000044486	SRSF3	64	46.835
ENSRROG00000029989	SRSF6	62	32.143	ENSRROG00000032796	-	53	32.143
ENSRROG00000029989	SRSF6	58	40.670	ENSRROG00000041506	-	77	50.000
ENSRROG00000029989	SRSF6	62	32.143	ENSRROG00000032850	RBM4B	57	32.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000029989	SRSF6	100	100.000	ENSG00000124193	SRSF6	100	100.000	Homo_sapiens
ENSRROG00000029989	SRSF6	58	93.590	ENSAPOG00000016635	-	84	82.353	Acanthochromis_polyacanthus
ENSRROG00000029989	SRSF6	94	85.538	ENSAMEG00000003710	SRSF6	94	85.538	Ailuropoda_melanoleuca
ENSRROG00000029989	SRSF6	86	68.581	ENSACIG00000023658	-	56	87.778	Amphilophus_citrinellus
ENSRROG00000029989	SRSF6	95	63.746	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSRROG00000029989	SRSF6	92	67.939	ENSAOCG00000019438	-	98	67.939	Amphiprion_ocellaris
ENSRROG00000029989	SRSF6	65	82.955	ENSAOCG00000004309	-	57	83.152	Amphiprion_ocellaris
ENSRROG00000029989	SRSF6	98	61.871	ENSAPEG00000013086	-	53	88.172	Amphiprion_percula
ENSRROG00000029989	SRSF6	63	84.706	ENSAPEG00000020746	-	66	79.787	Amphiprion_percula
ENSRROG00000029989	SRSF6	66	83.146	ENSATEG00000007255	-	71	80.000	Anabas_testudineus
ENSRROG00000029989	SRSF6	58	94.872	ENSACAG00000002061	SRSF6	92	85.093	Anolis_carolinensis
ENSRROG00000029989	SRSF6	100	100.000	ENSANAG00000024080	SRSF6	100	100.000	Aotus_nancymaae
ENSRROG00000029989	SRSF6	54	89.041	ENSACLG00000024373	-	96	79.570	Astatotilapia_calliptera
ENSRROG00000029989	SRSF6	55	91.892	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSRROG00000029989	SRSF6	55	93.243	ENSAMXG00000003101	-	51	85.789	Astyanax_mexicanus
ENSRROG00000029989	SRSF6	100	99.259	ENSBTAG00000008527	SRSF6	100	99.259	Bos_taurus
ENSRROG00000029989	SRSF6	100	100.000	ENSCJAG00000048403	SRSF6	100	100.000	Callithrix_jacchus
ENSRROG00000029989	SRSF6	100	99.259	ENSCAFG00000009289	SRSF6	100	99.259	Canis_familiaris
ENSRROG00000029989	SRSF6	100	99.259	ENSCAFG00020013559	SRSF6	100	99.259	Canis_lupus_dingo
ENSRROG00000029989	SRSF6	100	97.101	ENSCHIG00000009148	-	100	97.101	Capra_hircus
ENSRROG00000029989	SRSF6	100	99.259	ENSCHIG00000015890	-	100	99.259	Capra_hircus
ENSRROG00000029989	SRSF6	100	82.899	ENSTSYG00000026476	SRSF6	100	82.899	Carlito_syrichta
ENSRROG00000029989	SRSF6	100	100.000	ENSCPOG00000011761	SRSF6	100	100.000	Cavia_porcellus
ENSRROG00000029989	SRSF6	100	100.000	ENSCCAG00000026018	-	100	100.000	Cebus_capucinus
ENSRROG00000029989	SRSF6	94	68.468	ENSCCAG00000018540	-	62	87.766	Cebus_capucinus
ENSRROG00000029989	SRSF6	100	100.000	ENSCATG00000030794	SRSF6	100	100.000	Cercocebus_atys
ENSRROG00000029989	SRSF6	100	100.000	ENSCLAG00000010247	SRSF6	100	100.000	Chinchilla_lanigera
ENSRROG00000029989	SRSF6	100	99.417	ENSCSAG00000014022	SRSF6	100	99.417	Chlorocebus_sabaeus
ENSRROG00000029989	SRSF6	100	82.899	ENSCHOG00000000561	SRSF6	100	82.899	Choloepus_hoffmanni
ENSRROG00000029989	SRSF6	58	97.436	ENSCPBG00000018200	SRSF6	94	84.615	Chrysemys_picta_bellii
ENSRROG00000029989	SRSF6	100	84.840	ENSCANG00000042529	-	100	84.840	Colobus_angolensis_palliatus
ENSRROG00000029989	SRSF6	100	99.125	ENSCANG00000037774	-	100	99.125	Colobus_angolensis_palliatus
ENSRROG00000029989	SRSF6	100	98.519	ENSCGRG00001022339	Srsf6	100	98.519	Cricetulus_griseus_chok1gshd
ENSRROG00000029989	SRSF6	62	96.262	ENSCGRG00000006618	Srsf6	100	96.262	Cricetulus_griseus_crigri
ENSRROG00000029989	SRSF6	58	93.590	ENSCSEG00000019778	SRSF6	90	84.252	Cynoglossus_semilaevis
ENSRROG00000029989	SRSF6	58	92.308	ENSCVAG00000001863	SRSF6	95	85.039	Cyprinodon_variegatus
ENSRROG00000029989	SRSF6	55	90.541	ENSDARG00000016783	srsf6b	87	89.157	Danio_rerio
ENSRROG00000029989	SRSF6	94	95.679	ENSDNOG00000008410	SRSF6	94	95.679	Dasypus_novemcinctus
ENSRROG00000029989	SRSF6	100	100.000	ENSDORG00000028378	Srsf6	100	100.000	Dipodomys_ordii
ENSRROG00000029989	SRSF6	93	92.812	ENSETEG00000006221	SRSF6	94	90.432	Echinops_telfairi
ENSRROG00000029989	SRSF6	100	96.812	ENSEASG00005023429	SRSF6	100	96.812	Equus_asinus_asinus
ENSRROG00000029989	SRSF6	100	96.812	ENSECAG00000023932	SRSF6	100	96.812	Equus_caballus
ENSRROG00000029989	SRSF6	56	94.359	ENSEEUG00000002324	SRSF6	90	94.924	Erinaceus_europaeus
ENSRROG00000029989	SRSF6	98	59.286	ENSELUG00000024182	SRSF6	85	87.356	Esox_lucius
ENSRROG00000029989	SRSF6	73	77.778	ENSELUG00000013506	SRSF6	88	77.778	Esox_lucius
ENSRROG00000029989	SRSF6	100	97.391	ENSFCAG00000032814	SRSF6	100	97.391	Felis_catus
ENSRROG00000029989	SRSF6	94	81.481	ENSFDAG00000012191	SRSF6	93	78.704	Fukomys_damarensis
ENSRROG00000029989	SRSF6	87	71.148	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSRROG00000029989	SRSF6	56	90.789	ENSGMOG00000014458	srsf6a	52	78.646	Gadus_morhua
ENSRROG00000029989	SRSF6	61	76.829	ENSGMOG00000006105	srsf6a	62	70.391	Gadus_morhua
ENSRROG00000029989	SRSF6	100	97.037	ENSGALG00000000990	SRSF6	100	97.037	Gallus_gallus
ENSRROG00000029989	SRSF6	58	92.308	ENSGAFG00000019088	-	72	82.400	Gambusia_affinis
ENSRROG00000029989	SRSF6	98	61.194	ENSGACG00000006084	srsf6a	53	83.871	Gasterosteus_aculeatus
ENSRROG00000029989	SRSF6	58	97.436	ENSGAGG00000003238	SRSF6	94	84.615	Gopherus_agassizii
ENSRROG00000029989	SRSF6	100	100.000	ENSGGOG00000009808	SRSF6	100	100.000	Gorilla_gorilla
ENSRROG00000029989	SRSF6	56	89.474	ENSHBUG00000006386	-	58	83.696	Haplochromis_burtoni
ENSRROG00000029989	SRSF6	100	100.000	ENSHGLG00000007348	SRSF6	100	100.000	Heterocephalus_glaber_female
ENSRROG00000029989	SRSF6	91	76.038	ENSHGLG00000007701	-	58	79.144	Heterocephalus_glaber_female
ENSRROG00000029989	SRSF6	94	81.790	ENSHGLG00100005043	SRSF6	93	79.012	Heterocephalus_glaber_male
ENSRROG00000029989	SRSF6	58	89.744	ENSHCOG00000002740	srsf6a	57	83.152	Hippocampus_comes
ENSRROG00000029989	SRSF6	58	92.308	ENSIPUG00000004776	-	72	72.103	Ictalurus_punctatus
ENSRROG00000029989	SRSF6	100	100.000	ENSSTOG00000010866	SRSF6	100	100.000	Ictidomys_tridecemlineatus
ENSRROG00000029989	SRSF6	56	95.812	ENSJJAG00000020690	Srsf6	91	95.855	Jaculus_jaculus
ENSRROG00000029989	SRSF6	54	93.151	ENSKMAG00000011934	srsf6a	59	85.870	Kryptolebias_marmoratus
ENSRROG00000029989	SRSF6	58	92.308	ENSLBEG00000007356	srsf6a	52	85.484	Labrus_bergylta
ENSRROG00000029989	SRSF6	89	82.581	ENSLACG00000005466	SRSF6	54	91.848	Latimeria_chalumnae
ENSRROG00000029989	SRSF6	69	94.979	ENSLAFG00000006682	SRSF6	89	95.197	Loxodonta_africana
ENSRROG00000029989	SRSF6	100	100.000	ENSMFAG00000036925	SRSF6	100	100.000	Macaca_fascicularis
ENSRROG00000029989	SRSF6	100	100.000	ENSMMUG00000006742	SRSF6	100	100.000	Macaca_mulatta
ENSRROG00000029989	SRSF6	100	97.959	ENSMNEG00000038270	-	100	97.959	Macaca_nemestrina
ENSRROG00000029989	SRSF6	100	98.834	ENSMNEG00000027392	-	100	98.834	Macaca_nemestrina
ENSRROG00000029989	SRSF6	62	99.065	ENSMLEG00000031524	SRSF6	100	99.065	Mandrillus_leucophaeus
ENSRROG00000029989	SRSF6	98	61.871	ENSMAMG00000017161	srsf6a	53	87.634	Mastacembelus_armatus
ENSRROG00000029989	SRSF6	63	87.059	ENSMAMG00000023477	-	89	87.059	Mastacembelus_armatus
ENSRROG00000029989	SRSF6	56	89.474	ENSMZEG00005008032	-	57	83.696	Maylandia_zebra
ENSRROG00000029989	SRSF6	98	58.333	ENSMZEG00005020658	-	60	82.873	Maylandia_zebra
ENSRROG00000029989	SRSF6	100	98.519	ENSMAUG00000019086	-	100	98.519	Mesocricetus_auratus
ENSRROG00000029989	SRSF6	100	100.000	ENSMICG00000008537	SRSF6	100	100.000	Microcebus_murinus
ENSRROG00000029989	SRSF6	62	96.262	ENSMOCG00000018738	Srsf6	100	96.262	Microtus_ochrogaster
ENSRROG00000029989	SRSF6	58	92.308	ENSMMOG00000015241	-	78	90.361	Mola_mola
ENSRROG00000029989	SRSF6	58	97.436	ENSMODG00000003107	SRSF6	95	87.926	Monodelphis_domestica
ENSRROG00000029989	SRSF6	100	98.519	MGP_CAROLIEiJ_G0024606	Srsf6	100	98.519	Mus_caroli
ENSRROG00000029989	SRSF6	100	98.519	ENSMUSG00000016921	Srsf6	100	98.519	Mus_musculus
ENSRROG00000029989	SRSF6	100	98.519	MGP_PahariEiJ_G0026050	Srsf6	100	98.519	Mus_pahari
ENSRROG00000029989	SRSF6	100	98.519	MGP_SPRETEiJ_G0025528	Srsf6	100	98.519	Mus_spretus
ENSRROG00000029989	SRSF6	83	97.222	ENSMPUG00000017692	SRSF6	99	97.222	Mustela_putorius_furo
ENSRROG00000029989	SRSF6	93	80.435	ENSMLUG00000016618	SRSF6	94	80.556	Myotis_lucifugus
ENSRROG00000029989	SRSF6	100	100.000	ENSNGAG00000017560	Srsf6	100	100.000	Nannospalax_galili
ENSRROG00000029989	SRSF6	58	93.590	ENSNBRG00000001846	-	52	87.634	Neolamprologus_brichardi
ENSRROG00000029989	SRSF6	56	89.474	ENSNBRG00000014709	-	58	83.696	Neolamprologus_brichardi
ENSRROG00000029989	SRSF6	100	100.000	ENSNLEG00000006524	SRSF6	100	100.000	Nomascus_leucogenys
ENSRROG00000029989	SRSF6	58	97.436	ENSMEUG00000014615	SRSF6	62	96.809	Notamacropus_eugenii
ENSRROG00000029989	SRSF6	69	96.653	ENSOPRG00000002017	-	89	96.943	Ochotona_princeps
ENSRROG00000029989	SRSF6	100	100.000	ENSODEG00000016510	-	100	100.000	Octodon_degus
ENSRROG00000029989	SRSF6	61	86.585	ENSONIG00000020247	-	53	84.239	Oreochromis_niloticus
ENSRROG00000029989	SRSF6	84	80.065	ENSOCUG00000009785	-	98	83.446	Oryctolagus_cuniculus
ENSRROG00000029989	SRSF6	70	57.676	ENSOCUG00000023999	-	70	63.687	Oryctolagus_cuniculus
ENSRROG00000029989	SRSF6	58	94.872	ENSORLG00020017506	srsf6a	90	70.323	Oryzias_latipes_hni
ENSRROG00000029989	SRSF6	98	68.613	ENSOGAG00000014468	SRSF6	94	96.605	Otolemur_garnettii
ENSRROG00000029989	SRSF6	93	93.478	ENSOARG00000003117	SRSF6	94	93.519	Ovis_aries
ENSRROG00000029989	SRSF6	90	85.761	ENSPPAG00000043131	-	100	88.026	Pan_paniscus
ENSRROG00000029989	SRSF6	100	99.128	ENSPPAG00000034327	-	100	99.128	Pan_paniscus
ENSRROG00000029989	SRSF6	100	97.391	ENSPPRG00000008917	SRSF6	100	97.391	Panthera_pardus
ENSRROG00000029989	SRSF6	62	96.759	ENSPTIG00000019153	SRSF6	100	96.759	Panthera_tigris_altaica
ENSRROG00000029989	SRSF6	90	85.761	ENSPTRG00000046274	-	100	88.026	Pan_troglodytes
ENSRROG00000029989	SRSF6	100	100.000	ENSPTRG00000044686	-	100	100.000	Pan_troglodytes
ENSRROG00000029989	SRSF6	100	100.000	ENSPANG00000035224	SRSF6	100	100.000	Papio_anubis
ENSRROG00000029989	SRSF6	100	66.379	ENSPKIG00000018463	-	83	89.286	Paramormyrops_kingsleyae
ENSRROG00000029989	SRSF6	59	77.500	ENSPKIG00000015703	-	95	61.745	Paramormyrops_kingsleyae
ENSRROG00000029989	SRSF6	58	93.590	ENSPKIG00000015603	-	88	84.252	Paramormyrops_kingsleyae
ENSRROG00000029989	SRSF6	89	71.753	ENSPMGG00000014963	srsf6a	55	89.130	Periophthalmus_magnuspinnatus
ENSRROG00000029989	SRSF6	85	87.931	ENSPEMG00000022405	-	96	87.931	Peromyscus_maniculatus_bairdii
ENSRROG00000029989	SRSF6	100	98.519	ENSPCIG00000003820	SRSF6	100	98.519	Phascolarctos_cinereus
ENSRROG00000029989	SRSF6	58	92.308	ENSPFOG00000006437	srsf6a	50	83.158	Poecilia_formosa
ENSRROG00000029989	SRSF6	58	92.308	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSRROG00000029989	SRSF6	58	92.308	ENSPMEG00000006042	SRSF6	54	87.027	Poecilia_mexicana
ENSRROG00000029989	SRSF6	59	91.139	ENSPREG00000001040	srsf6a	87	83.846	Poecilia_reticulata
ENSRROG00000029989	SRSF6	100	99.419	ENSPPYG00000011019	SRSF6	100	99.419	Pongo_abelii
ENSRROG00000029989	SRSF6	58	98.718	ENSPCAG00000010954	SRSF6	96	91.304	Procavia_capensis
ENSRROG00000029989	SRSF6	100	100.000	ENSPCOG00000026364	SRSF6	100	100.000	Propithecus_coquereli
ENSRROG00000029989	SRSF6	94	95.652	ENSPVAG00000015232	SRSF6	94	95.652	Pteropus_vampyrus
ENSRROG00000029989	SRSF6	56	89.474	ENSPNYG00000004944	-	58	83.696	Pundamilia_nyererei
ENSRROG00000029989	SRSF6	58	93.590	ENSPNYG00000011272	-	51	87.634	Pundamilia_nyererei
ENSRROG00000029989	SRSF6	59	95.000	ENSPNAG00000023179	-	94	84.252	Pygocentrus_nattereri
ENSRROG00000029989	SRSF6	99	97.041	ENSRNOG00000006380	Srsf6	99	97.041	Rattus_norvegicus
ENSRROG00000029989	SRSF6	100	98.251	ENSRBIG00000041414	SRSF6	100	98.251	Rhinopithecus_bieti
ENSRROG00000029989	SRSF6	93	71.473	ENSSBOG00000034078	-	54	77.348	Saimiri_boliviensis_boliviensis
ENSRROG00000029989	SRSF6	100	100.000	ENSSBOG00000033708	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSRROG00000029989	SRSF6	58	97.436	ENSSHAG00000012805	SRSF6	95	87.926	Sarcophilus_harrisii
ENSRROG00000029989	SRSF6	55	93.243	ENSSFOG00015015169	SRSF6	60	89.130	Scleropages_formosus
ENSRROG00000029989	SRSF6	89	64.286	ENSSFOG00015019681	-	53	81.959	Scleropages_formosus
ENSRROG00000029989	SRSF6	59	92.500	ENSSMAG00000014861	-	95	67.969	Scophthalmus_maximus
ENSRROG00000029989	SRSF6	56	88.158	ENSSMAG00000017447	-	55	79.891	Scophthalmus_maximus
ENSRROG00000029989	SRSF6	63	87.059	ENSSDUG00000011036	-	90	87.059	Seriola_dumerili
ENSRROG00000029989	SRSF6	98	61.151	ENSSDUG00000016097	srsf6a	53	87.634	Seriola_dumerili
ENSRROG00000029989	SRSF6	98	61.871	ENSSLDG00000022841	srsf6a	54	87.634	Seriola_lalandi_dorsalis
ENSRROG00000029989	SRSF6	63	87.059	ENSSLDG00000014858	-	90	87.059	Seriola_lalandi_dorsalis
ENSRROG00000029989	SRSF6	75	95.753	ENSSARG00000001602	SRSF6	100	95.753	Sorex_araneus
ENSRROG00000029989	SRSF6	100	97.037	ENSSPUG00000004967	SRSF6	100	97.037	Sphenodon_punctatus
ENSRROG00000029989	SRSF6	98	61.871	ENSSPAG00000002362	srsf6a	67	85.714	Stegastes_partitus
ENSRROG00000029989	SRSF6	63	84.706	ENSSPAG00000021913	-	86	84.706	Stegastes_partitus
ENSRROG00000029989	SRSF6	100	96.812	ENSSSCG00000007362	SRSF6	100	96.812	Sus_scrofa
ENSRROG00000029989	SRSF6	93	84.211	ENSTGUG00000003455	SRSF6	94	85.015	Taeniopygia_guttata
ENSRROG00000029989	SRSF6	59	92.500	ENSTRUG00000021397	-	87	92.500	Takifugu_rubripes
ENSRROG00000029989	SRSF6	87	70.764	ENSTNIG00000001692	srsf6a	57	86.022	Tetraodon_nigroviridis
ENSRROG00000029989	SRSF6	85	93.793	ENSTBEG00000013448	SRSF6	92	94.118	Tupaia_belangeri
ENSRROG00000029989	SRSF6	75	96.139	ENSTTRG00000015410	SRSF6	100	96.139	Tursiops_truncatus
ENSRROG00000029989	SRSF6	100	99.259	ENSUAMG00000003559	SRSF6	100	99.259	Ursus_americanus
ENSRROG00000029989	SRSF6	62	96.759	ENSUMAG00000001154	SRSF6	100	96.759	Ursus_maritimus
ENSRROG00000029989	SRSF6	75	100.000	ENSVPAG00000003016	SRSF6	74	100.000	Vicugna_pacos
ENSRROG00000029989	SRSF6	100	78.519	ENSVVUG00000019276	-	100	78.519	Vulpes_vulpes
ENSRROG00000029989	SRSF6	58	92.308	ENSXMAG00000021849	srsf6a	55	86.413	Xiphophorus_maculatus