EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000029996 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DNA dC->dU-editing enzyme APOBEC-3F pseudogene
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 1120 bases
Position: chrKN295954.1:63914-65033
Accession: 104664209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000011303	APOBEC_N	PF08210.11	1.1e-96	1	2
ENSRROP00000011303	APOBEC_N	PF08210.11	1.1e-96	2	2
ENSRROP00000011299	APOBEC_N	PF08210.11	2.7e-96	1	2
ENSRROP00000011299	APOBEC_N	PF08210.11	2.7e-96	2	2
ENSRROP00000011303	APOBEC_C	PF05240.14	1.3e-61	1	2
ENSRROP00000011303	APOBEC_C	PF05240.14	1.3e-61	2	2
ENSRROP00000011299	APOBEC_C	PF05240.14	1.3e-61	1	2
ENSRROP00000011299	APOBEC_C	PF05240.14	1.3e-61	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000035405	-	1050	-	ENSRROP00000011303	349 (aa)	-	A0A2K6P452
ENSRROT00000035401	-	1062	-	ENSRROP00000011299	353 (aa)	-	A0A2K6P461

Gene Model

Click here to download ENSRROG00000029996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000029996's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000029996	-	95	33.862	ENSRROG00000024699	APOBEC3H	88	35.714
ENSRROG00000029996	-	100	53.826	ENSRROG00000028773	APOBEC3G	99	53.826
ENSRROG00000029996	-	98	32.961	ENSRROG00000030082	APOBEC2	81	33.523
ENSRROG00000029996	-	100	79.444	ENSRROG00000028557	-	100	79.444
ENSRROG00000029996	-	100	87.668	ENSRROG00000029045	APOBEC3C	100	87.668
ENSRROG00000029996	-	55	41.250	ENSRROG00000033576	APOBEC1	62	41.250
ENSRROG00000029996	-	97	40.437	ENSRROG00000032866	AICDA	96	38.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000029996	-	100	75.000	ENSG00000244509	APOBEC3C	100	75.000	Homo_sapiens
ENSRROG00000029996	-	100	77.778	ENSG00000243811	APOBEC3D	100	77.778	Homo_sapiens
ENSRROG00000029996	-	100	82.842	ENSG00000128394	APOBEC3F	100	82.842	Homo_sapiens
ENSRROG00000029996	-	99	68.889	ENSANAG00000030088	-	94	68.889	Aotus_nancymaae
ENSRROG00000029996	-	71	67.424	ENSCJAG00000015317	-	100	67.424	Callithrix_jacchus
ENSRROG00000029996	-	95	46.927	ENSCAFG00020002615	-	98	46.927	Canis_lupus_dingo
ENSRROG00000029996	-	99	49.451	ENSTSYG00000034260	-	98	49.451	Carlito_syrichta
ENSRROG00000029996	-	97	56.977	ENSTSYG00000028254	-	98	56.977	Carlito_syrichta
ENSRROG00000029996	-	97	52.247	ENSTSYG00000030036	-	98	52.247	Carlito_syrichta
ENSRROG00000029996	-	99	69.444	ENSCCAG00000030932	-	86	69.444	Cebus_capucinus
ENSRROG00000029996	-	100	72.778	ENSCATG00000043226	APOBEC3C	100	72.778	Cercocebus_atys
ENSRROG00000029996	-	98	92.778	ENSCATG00000033502	-	95	92.778	Cercocebus_atys
ENSRROG00000029996	-	100	71.111	ENSCSAG00000006402	APOBEC3C	100	71.111	Chlorocebus_sabaeus
ENSRROG00000029996	-	100	80.000	ENSCSAG00000006382	APOBEC3F	100	80.000	Chlorocebus_sabaeus
ENSRROG00000029996	-	100	88.204	ENSCANG00000032904	-	100	88.204	Colobus_angolensis_palliatus
ENSRROG00000029996	-	98	92.222	ENSCANG00000033269	-	99	92.222	Colobus_angolensis_palliatus
ENSRROG00000029996	-	100	72.778	ENSCANG00000039177	APOBEC3C	100	72.778	Colobus_angolensis_palliatus
ENSRROG00000029996	-	100	78.049	ENSCANG00000031957	-	99	78.049	Colobus_angolensis_palliatus
ENSRROG00000029996	-	96	32.692	ENSDNOG00000044642	-	99	32.692	Dasypus_novemcinctus
ENSRROG00000029996	-	99	45.000	ENSEASG00005018641	-	96	45.000	Equus_asinus_asinus
ENSRROG00000029996	-	99	46.561	ENSECAG00000006071	-	99	46.154	Equus_caballus
ENSRROG00000029996	-	100	74.444	ENSGGOG00000036587	-	100	74.444	Gorilla_gorilla
ENSRROG00000029996	-	100	83.110	ENSGGOG00000038678	APOBEC3F	100	83.110	Gorilla_gorilla
ENSRROG00000029996	-	99	43.931	ENSHGLG00000017315	-	83	43.931	Heterocephalus_glaber_female
ENSRROG00000029996	-	99	43.931	ENSHGLG00100003105	-	93	43.931	Heterocephalus_glaber_male
ENSRROG00000029996	-	100	72.460	ENSMFAG00000002331	-	100	72.460	Macaca_fascicularis
ENSRROG00000029996	-	100	73.333	ENSMFAG00000016792	APOBEC3C	100	73.333	Macaca_fascicularis
ENSRROG00000029996	-	100	85.255	ENSMFAG00000004037	APOBEC3F	100	85.255	Macaca_fascicularis
ENSRROG00000029996	-	98	73.889	ENSMMUG00000004018	APOBEC3C	95	73.889	Macaca_mulatta
ENSRROG00000029996	-	98	90.556	ENSMMUG00000004017	APOBEC3F	95	90.556	Macaca_mulatta
ENSRROG00000029996	-	100	71.667	ENSMNEG00000045196	APOBEC3C	100	71.667	Macaca_nemestrina
ENSRROG00000029996	-	100	80.447	ENSMNEG00000043316	APOBEC3D	100	80.447	Macaca_nemestrina
ENSRROG00000029996	-	100	87.668	ENSMLEG00000029642	APOBEC3F	100	87.668	Mandrillus_leucophaeus
ENSRROG00000029996	-	100	72.778	ENSMLEG00000036992	APOBEC3C	100	72.778	Mandrillus_leucophaeus
ENSRROG00000029996	-	99	52.577	ENSMICG00000042615	-	92	52.577	Microcebus_murinus
ENSRROG00000029996	-	99	42.357	ENSMLUG00000023676	-	99	42.357	Myotis_lucifugus
ENSRROG00000029996	-	100	71.667	ENSNLEG00000028392	APOBEC3C	100	71.667	Nomascus_leucogenys
ENSRROG00000029996	-	100	63.990	ENSNLEG00000035811	-	100	63.990	Nomascus_leucogenys
ENSRROG00000029996	-	99	40.650	ENSOGAG00000030300	-	99	40.650	Otolemur_garnettii
ENSRROG00000029996	-	100	41.969	ENSOGAG00000032498	-	100	41.969	Otolemur_garnettii
ENSRROG00000029996	-	97	41.484	ENSOGAG00000033404	-	100	41.484	Otolemur_garnettii
ENSRROG00000029996	-	100	76.111	ENSPPAG00000028218	-	100	76.111	Pan_paniscus
ENSRROG00000029996	-	100	75.000	ENSPPAG00000014118	APOBEC3C	100	75.000	Pan_paniscus
ENSRROG00000029996	-	98	46.809	ENSPPRG00000003726	-	97	46.809	Panthera_pardus
ENSRROG00000029996	-	100	88.333	ENSPTRG00000014385	APOBEC3C	100	88.333	Pan_troglodytes
ENSRROG00000029996	-	100	75.556	ENSPTRG00000041588	APOBEC3D	100	75.556	Pan_troglodytes
ENSRROG00000029996	-	100	86.863	ENSPANG00000010775	APOBEC3F	100	86.863	Papio_anubis
ENSRROG00000029996	-	100	70.556	ENSPPYG00000011832	APOBEC3C	100	70.556	Pongo_abelii
ENSRROG00000029996	-	68	60.000	ENSPCOG00000018072	-	95	60.000	Propithecus_coquereli
ENSRROG00000029996	-	70	58.140	ENSPCOG00000022067	-	98	58.140	Propithecus_coquereli
ENSRROG00000029996	-	82	50.407	ENSPVAG00000009461	-	71	50.407	Pteropus_vampyrus
ENSRROG00000029996	-	100	99.150	ENSRBIG00000042297	-	100	99.150	Rhinopithecus_bieti
ENSRROG00000029996	-	100	78.889	ENSRBIG00000030834	-	100	78.889	Rhinopithecus_bieti
ENSRROG00000029996	-	100	87.845	ENSRBIG00000030323	-	100	87.845	Rhinopithecus_bieti
ENSRROG00000029996	-	99	69.444	ENSSBOG00000032780	-	100	69.444	Saimiri_boliviensis_boliviensis
ENSRROG00000029996	-	93	45.251	ENSUAMG00000004433	-	98	45.506	Ursus_americanus
ENSRROG00000029996	-	99	45.251	ENSUMAG00000014441	-	90	43.979	Ursus_maritimus
ENSRROG00000029996	-	82	47.712	ENSVVUG00000014628	-	97	51.493	Vulpes_vulpes