EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000031473 (Gene tree)
Gene ID: 104677062
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 74135 bases
Position: chrKN298423.1:550827-624961
Accession: 104677062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000014549	RNA_pol_Rpb1_5	PF04998.17	6.1e-104	1	1
ENSRROP00000014559	RNA_pol_Rpb1_5	PF04998.17	6.9e-104	1	1
ENSRROP00000014555	RNA_pol_Rpb1_5	PF04998.17	8.2e-104	1	1
ENSRROP00000014549	RNA_pol_Rpb1_4	PF05000.17	1.7e-25	1	1
ENSRROP00000014555	RNA_pol_Rpb1_4	PF05000.17	1.8e-25	1	1
ENSRROP00000014559	RNA_pol_Rpb1_4	PF05000.17	2e-25	1	1
ENSRROP00000014559	RNA_pol_Rpb1_2	PF00623.20	1.8e-70	1	1
ENSRROP00000014549	RNA_pol_Rpb1_2	PF00623.20	1.8e-70	1	1
ENSRROP00000014555	RNA_pol_Rpb1_2	PF00623.20	1.9e-70	1	1
ENSRROP00000014559	RNA_pol_Rpb1_3	PF04983.18	3.7e-36	1	1
ENSRROP00000014549	RNA_pol_Rpb1_3	PF04983.18	4.3e-36	1	1
ENSRROP00000014555	RNA_pol_Rpb1_3	PF04983.18	4.5e-36	1	1
ENSRROP00000014555	RNA_pol_Rpb1_1	PF04997.12	2.2e-22	1	1
ENSRROP00000014549	RNA_pol_Rpb1_1	PF04997.12	2.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000038688	POLR1A-203	7900	XM_010381998	ENSRROP00000014559	1555 (aa)	XP_010380300	A0A2K6PDJ6
ENSRROT00000038678	POLR1A-201	8653	XM_010381996	ENSRROP00000014549	1720 (aa)	XP_010380298	A0A2K6PDI7
ENSRROT00000038684	POLR1A-202	8461	-	ENSRROP00000014555	1754 (aa)	-	A0A2K6PDF4

Gene Model

Click here to download ENSRROG00000031473's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000031473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000031473	POLR1A	88	30.769	ENSRROG00000029583	-	71	30.769
ENSRROG00000031473	POLR1A	61	37.584	ENSRROG00000025527	POLR3A	67	37.584

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000031473	POLR1A	100	96.977	ENSG00000068654	POLR1A	100	96.977	Homo_sapiens
ENSRROG00000031473	POLR1A	69	67.761	ENSAPOG00000017945	polr1a	99	68.098	Acanthochromis_polyacanthus
ENSRROG00000031473	POLR1A	100	90.650	ENSAMEG00000005807	POLR1A	100	91.598	Ailuropoda_melanoleuca
ENSRROG00000031473	POLR1A	96	67.102	ENSACIG00000022147	polr1a	100	66.302	Amphilophus_citrinellus
ENSRROG00000031473	POLR1A	100	65.767	ENSAOCG00000017336	polr1a	100	68.099	Amphiprion_ocellaris
ENSRROG00000031473	POLR1A	95	74.306	ENSAPEG00000016105	polr1a	98	74.306	Amphiprion_percula
ENSRROG00000031473	POLR1A	100	65.665	ENSATEG00000016773	polr1a	100	65.491	Anabas_testudineus
ENSRROG00000031473	POLR1A	97	71.391	ENSAPLG00000013871	POLR1A	99	73.035	Anas_platyrhynchos
ENSRROG00000031473	POLR1A	100	68.902	ENSACAG00000012141	POLR1A	99	68.548	Anolis_carolinensis
ENSRROG00000031473	POLR1A	100	94.302	ENSANAG00000033927	POLR1A	100	94.128	Aotus_nancymaae
ENSRROG00000031473	POLR1A	100	61.296	ENSACLG00000020541	polr1a	100	61.313	Astatotilapia_calliptera
ENSRROG00000031473	POLR1A	100	89.599	ENSBTAG00000006481	POLR1A	100	89.599	Bos_taurus
ENSRROG00000031473	POLR1A	99	38.294	WBGene00012999	rpoa-1	98	38.194	Caenorhabditis_elegans
ENSRROG00000031473	POLR1A	100	94.012	ENSCJAG00000019547	POLR1A	100	94.012	Callithrix_jacchus
ENSRROG00000031473	POLR1A	100	90.360	ENSCAFG00000007613	POLR1A	100	90.174	Canis_familiaris
ENSRROG00000031473	POLR1A	100	90.156	ENSCAFG00020014752	POLR1A	100	89.971	Canis_lupus_dingo
ENSRROG00000031473	POLR1A	100	87.717	ENSCHIG00000018204	POLR1A	100	87.659	Capra_hircus
ENSRROG00000031473	POLR1A	100	89.599	ENSTSYG00000002761	POLR1A	100	89.076	Carlito_syrichta
ENSRROG00000031473	POLR1A	100	81.182	ENSCAPG00000010132	POLR1A	100	83.274	Cavia_aperea
ENSRROG00000031473	POLR1A	100	88.095	ENSCPOG00000012350	POLR1A	100	87.921	Cavia_porcellus
ENSRROG00000031473	POLR1A	100	94.651	ENSCCAG00000019839	POLR1A	100	94.651	Cebus_capucinus
ENSRROG00000031473	POLR1A	100	98.547	ENSCATG00000029786	POLR1A	100	98.547	Cercocebus_atys
ENSRROG00000031473	POLR1A	100	88.754	ENSCLAG00000005187	POLR1A	100	88.290	Chinchilla_lanigera
ENSRROG00000031473	POLR1A	100	98.663	ENSCSAG00000016251	POLR1A	100	98.663	Chlorocebus_sabaeus
ENSRROG00000031473	POLR1A	99	74.710	ENSCPBG00000001115	POLR1A	99	74.233	Chrysemys_picta_bellii
ENSRROG00000031473	POLR1A	50	42.053	ENSCING00000007684	-	99	41.977	Ciona_intestinalis
ENSRROG00000031473	POLR1A	99	46.667	ENSCSAVG00000007184	-	98	49.167	Ciona_savignyi
ENSRROG00000031473	POLR1A	100	96.165	ENSCANG00000031785	POLR1A	100	96.165	Colobus_angolensis_palliatus
ENSRROG00000031473	POLR1A	100	82.091	ENSCGRG00001006651	Polr1a	100	82.455	Cricetulus_griseus_chok1gshd
ENSRROG00000031473	POLR1A	69	82.929	ENSCGRG00000010834	Polr1a	100	86.267	Cricetulus_griseus_crigri
ENSRROG00000031473	POLR1A	100	62.029	ENSCSEG00000020190	polr1a	100	61.833	Cynoglossus_semilaevis
ENSRROG00000031473	POLR1A	100	64.380	ENSCVAG00000020941	polr1a	100	64.948	Cyprinodon_variegatus
ENSRROG00000031473	POLR1A	100	66.802	ENSDARG00000098375	polr1a	100	66.357	Danio_rerio
ENSRROG00000031473	POLR1A	100	82.493	ENSDNOG00000010829	POLR1A	100	81.971	Dasypus_novemcinctus
ENSRROG00000031473	POLR1A	100	87.218	ENSDORG00000008298	Polr1a	100	87.045	Dipodomys_ordii
ENSRROG00000031473	POLR1A	92	50.725	FBgn0019938	RpI1	99	42.973	Drosophila_melanogaster
ENSRROG00000031473	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSRROG00000031473	POLR1A	90	67.442	ENSEBUG00000005667	-	99	67.442	Eptatretus_burgeri
ENSRROG00000031473	POLR1A	100	91.521	ENSEASG00005001625	POLR1A	100	91.521	Equus_asinus_asinus
ENSRROG00000031473	POLR1A	100	91.521	ENSECAG00000030510	-	100	92.516	Equus_caballus
ENSRROG00000031473	POLR1A	100	91.521	ENSECAG00000010092	POLR1A	100	92.516	Equus_caballus
ENSRROG00000031473	POLR1A	100	91.521	ENSECAG00000036306	-	100	92.516	Equus_caballus
ENSRROG00000031473	POLR1A	85	92.913	ENSEEUG00000000676	POLR1A	81	94.444	Erinaceus_europaeus
ENSRROG00000031473	POLR1A	100	67.285	ENSELUG00000012769	polr1a	99	67.227	Esox_lucius
ENSRROG00000031473	POLR1A	100	91.163	ENSFCAG00000008966	POLR1A	100	90.988	Felis_catus
ENSRROG00000031473	POLR1A	99	70.909	ENSFALG00000010082	POLR1A	99	70.416	Ficedula_albicollis
ENSRROG00000031473	POLR1A	100	88.502	ENSFDAG00000013726	POLR1A	100	87.747	Fukomys_damarensis
ENSRROG00000031473	POLR1A	100	62.159	ENSFHEG00000005996	polr1a	100	61.806	Fundulus_heteroclitus
ENSRROG00000031473	POLR1A	100	60.283	ENSGMOG00000002230	polr1a	100	59.757	Gadus_morhua
ENSRROG00000031473	POLR1A	90	69.236	ENSGALG00000038160	-	99	69.098	Gallus_gallus
ENSRROG00000031473	POLR1A	100	64.580	ENSGAFG00000015266	polr1a	100	64.195	Gambusia_affinis
ENSRROG00000031473	POLR1A	100	64.937	ENSGACG00000018791	polr1a	100	64.413	Gasterosteus_aculeatus
ENSRROG00000031473	POLR1A	99	74.005	ENSGAGG00000004984	-	96	80.657	Gopherus_agassizii
ENSRROG00000031473	POLR1A	100	97.035	ENSGGOG00000001788	POLR1A	100	97.035	Gorilla_gorilla
ENSRROG00000031473	POLR1A	90	64.178	ENSHBUG00000020021	polr1a	99	64.377	Haplochromis_burtoni
ENSRROG00000031473	POLR1A	100	88.560	ENSHGLG00000006334	POLR1A	100	88.386	Heterocephalus_glaber_female
ENSRROG00000031473	POLR1A	100	88.303	ENSHGLG00100006614	POLR1A	100	88.130	Heterocephalus_glaber_male
ENSRROG00000031473	POLR1A	100	62.197	ENSHCOG00000003345	polr1a	100	61.965	Hippocampus_comes
ENSRROG00000031473	POLR1A	100	65.645	ENSIPUG00000013174	polr1a	100	65.089	Ictalurus_punctatus
ENSRROG00000031473	POLR1A	99	87.144	ENSSTOG00000012580	POLR1A	99	86.736	Ictidomys_tridecemlineatus
ENSRROG00000031473	POLR1A	100	87.420	ENSJJAG00000013113	Polr1a	100	87.246	Jaculus_jaculus
ENSRROG00000031473	POLR1A	100	65.912	ENSKMAG00000007399	polr1a	100	65.142	Kryptolebias_marmoratus
ENSRROG00000031473	POLR1A	95	68.392	ENSLBEG00000015401	polr1a	99	68.252	Labrus_bergylta
ENSRROG00000031473	POLR1A	53	75.843	ENSLACG00000003218	polr1a	100	75.843	Latimeria_chalumnae
ENSRROG00000031473	POLR1A	100	70.248	ENSLOCG00000010881	polr1a	100	69.839	Lepisosteus_oculatus
ENSRROG00000031473	POLR1A	100	89.178	ENSLAFG00000014948	POLR1A	100	89.294	Loxodonta_africana
ENSRROG00000031473	POLR1A	100	98.605	ENSMFAG00000046097	POLR1A	100	98.605	Macaca_fascicularis
ENSRROG00000031473	POLR1A	100	98.488	ENSMMUG00000015815	POLR1A	100	98.488	Macaca_mulatta
ENSRROG00000031473	POLR1A	100	98.547	ENSMNEG00000043313	POLR1A	100	98.547	Macaca_nemestrina
ENSRROG00000031473	POLR1A	100	97.907	ENSMLEG00000042428	POLR1A	100	97.907	Mandrillus_leucophaeus
ENSRROG00000031473	POLR1A	100	65.742	ENSMAMG00000016565	polr1a	100	65.815	Mastacembelus_armatus
ENSRROG00000031473	POLR1A	100	65.167	ENSMZEG00005004915	polr1a	100	65.336	Maylandia_zebra
ENSRROG00000031473	POLR1A	99	68.870	ENSMGAG00000013111	POLR1A	99	68.728	Meleagris_gallopavo
ENSRROG00000031473	POLR1A	100	85.185	ENSMAUG00000008497	Polr1a	100	86.860	Mesocricetus_auratus
ENSRROG00000031473	POLR1A	100	91.981	ENSMICG00000000757	POLR1A	100	91.691	Microcebus_murinus
ENSRROG00000031473	POLR1A	100	86.798	ENSMOCG00000000122	Polr1a	100	86.740	Microtus_ochrogaster
ENSRROG00000031473	POLR1A	100	65.215	ENSMMOG00000010216	polr1a	100	64.750	Mola_mola
ENSRROG00000031473	POLR1A	100	75.100	ENSMODG00000009335	POLR1A	100	74.684	Monodelphis_domestica
ENSRROG00000031473	POLR1A	100	65.741	ENSMALG00000013363	polr1a	100	64.709	Monopterus_albus
ENSRROG00000031473	POLR1A	100	85.408	MGP_CAROLIEiJ_G0028494	Polr1a	100	85.292	Mus_caroli
ENSRROG00000031473	POLR1A	100	85.756	ENSMUSG00000049553	Polr1a	100	85.698	Mus_musculus
ENSRROG00000031473	POLR1A	100	86.103	MGP_PahariEiJ_G0022230	Polr1a	100	85.987	Mus_pahari
ENSRROG00000031473	POLR1A	100	84.348	MGP_SPRETEiJ_G0029499	Polr1a	100	84.589	Mus_spretus
ENSRROG00000031473	POLR1A	100	90.465	ENSMPUG00000009135	POLR1A	100	90.349	Mustela_putorius_furo
ENSRROG00000031473	POLR1A	100	89.127	ENSMLUG00000015723	POLR1A	100	88.780	Myotis_lucifugus
ENSRROG00000031473	POLR1A	100	87.240	ENSNGAG00000017907	Polr1a	100	87.616	Nannospalax_galili
ENSRROG00000031473	POLR1A	100	65.283	ENSNBRG00000000519	polr1a	100	65.451	Neolamprologus_brichardi
ENSRROG00000031473	POLR1A	100	94.792	ENSNLEG00000002264	POLR1A	100	94.792	Nomascus_leucogenys
ENSRROG00000031473	POLR1A	75	92.913	ENSMEUG00000011665	-	75	92.913	Notamacropus_eugenii
ENSRROG00000031473	POLR1A	99	82.387	ENSOPRG00000008269	POLR1A	100	81.743	Ochotona_princeps
ENSRROG00000031473	POLR1A	100	89.257	ENSODEG00000003542	POLR1A	100	88.792	Octodon_degus
ENSRROG00000031473	POLR1A	100	66.010	ENSONIG00000015895	polr1a	100	65.547	Oreochromis_niloticus
ENSRROG00000031473	POLR1A	100	90.354	ENSOCUG00000010138	POLR1A	100	90.354	Oryctolagus_cuniculus
ENSRROG00000031473	POLR1A	100	64.405	ENSORLG00000008753	polr1a	99	64.679	Oryzias_latipes
ENSRROG00000031473	POLR1A	100	64.005	ENSORLG00020020726	polr1a	99	63.578	Oryzias_latipes_hni
ENSRROG00000031473	POLR1A	95	75.532	ENSORLG00015016071	polr1a	98	75.556	Oryzias_latipes_hsok
ENSRROG00000031473	POLR1A	100	90.814	ENSOGAG00000004031	POLR1A	100	90.814	Otolemur_garnettii
ENSRROG00000031473	POLR1A	100	89.031	ENSOARG00000020601	POLR1A	100	89.089	Ovis_aries
ENSRROG00000031473	POLR1A	100	96.686	ENSPPAG00000042450	POLR1A	100	96.686	Pan_paniscus
ENSRROG00000031473	POLR1A	100	91.395	ENSPPRG00000006702	POLR1A	100	91.047	Panthera_pardus
ENSRROG00000031473	POLR1A	100	90.614	ENSPTIG00000018783	POLR1A	100	90.498	Panthera_tigris_altaica
ENSRROG00000031473	POLR1A	100	96.512	ENSPTRG00000012147	POLR1A	100	96.512	Pan_troglodytes
ENSRROG00000031473	POLR1A	100	98.430	ENSPANG00000025908	POLR1A	100	98.430	Papio_anubis
ENSRROG00000031473	POLR1A	94	77.083	ENSPKIG00000005468	polr1a	99	77.083	Paramormyrops_kingsleyae
ENSRROG00000031473	POLR1A	72	68.398	ENSPSIG00000009321	-	99	70.394	Pelodiscus_sinensis
ENSRROG00000031473	POLR1A	54	68.342	ENSPMGG00000009718	polr1a	95	68.342	Periophthalmus_magnuspinnatus
ENSRROG00000031473	POLR1A	83	89.846	ENSPEMG00000022224	Polr1a	100	87.449	Peromyscus_maniculatus_bairdii
ENSRROG00000031473	POLR1A	95	78.689	ENSPCIG00000004222	POLR1A	99	78.116	Phascolarctos_cinereus
ENSRROG00000031473	POLR1A	100	65.527	ENSPFOG00000005025	polr1a	100	65.122	Poecilia_formosa
ENSRROG00000031473	POLR1A	100	65.759	ENSPLAG00000021389	polr1a	100	65.238	Poecilia_latipinna
ENSRROG00000031473	POLR1A	100	63.789	ENSPMEG00000006463	polr1a	100	63.810	Poecilia_mexicana
ENSRROG00000031473	POLR1A	100	65.527	ENSPREG00000002389	polr1a	100	65.006	Poecilia_reticulata
ENSRROG00000031473	POLR1A	100	96.105	ENSPPYG00000012217	POLR1A	100	96.105	Pongo_abelii
ENSRROG00000031473	POLR1A	89	96.000	ENSPCAG00000011582	POLR1A	88	96.000	Procavia_capensis
ENSRROG00000031473	POLR1A	100	91.691	ENSPCOG00000026987	POLR1A	100	91.458	Propithecus_coquereli
ENSRROG00000031473	POLR1A	95	90.809	ENSPVAG00000012674	POLR1A	95	90.106	Pteropus_vampyrus
ENSRROG00000031473	POLR1A	100	65.167	ENSPNYG00000000026	polr1a	100	65.336	Pundamilia_nyererei
ENSRROG00000031473	POLR1A	100	66.859	ENSPNAG00000019223	polr1a	99	68.288	Pygocentrus_nattereri
ENSRROG00000031473	POLR1A	100	87.319	ENSRNOG00000009545	Polr1a	100	87.087	Rattus_norvegicus
ENSRROG00000031473	POLR1A	100	99.942	ENSRBIG00000028335	POLR1A	100	99.942	Rhinopithecus_bieti
ENSRROG00000031473	POLR1A	99	37.192	YOR341W	RPA190	97	41.472	Saccharomyces_cerevisiae
ENSRROG00000031473	POLR1A	100	93.779	ENSSBOG00000030262	POLR1A	100	93.779	Saimiri_boliviensis_boliviensis
ENSRROG00000031473	POLR1A	100	73.429	ENSSHAG00000014739	POLR1A	100	72.213	Sarcophilus_harrisii
ENSRROG00000031473	POLR1A	100	67.572	ENSSFOG00015019716	polr1a	100	66.955	Scleropages_formosus
ENSRROG00000031473	POLR1A	100	66.300	ENSSMAG00000014342	polr1a	100	66.165	Scophthalmus_maximus
ENSRROG00000031473	POLR1A	100	66.130	ENSSDUG00000014631	polr1a	100	66.242	Seriola_dumerili
ENSRROG00000031473	POLR1A	100	64.191	ENSSLDG00000024095	polr1a	100	64.290	Seriola_lalandi_dorsalis
ENSRROG00000031473	POLR1A	77	96.809	ENSSARG00000003136	-	76	96.809	Sorex_araneus
ENSRROG00000031473	POLR1A	94	78.974	ENSSPUG00000004215	POLR1A	98	78.974	Sphenodon_punctatus
ENSRROG00000031473	POLR1A	63	71.769	ENSSPAG00000016341	polr1a	94	71.769	Stegastes_partitus
ENSRROG00000031473	POLR1A	83	90.750	ENSSSCG00000008226	POLR1A	99	90.724	Sus_scrofa
ENSRROG00000031473	POLR1A	100	69.275	ENSTGUG00000010704	POLR1A	100	69.706	Taeniopygia_guttata
ENSRROG00000031473	POLR1A	100	64.265	ENSTRUG00000002210	polr1a	99	63.783	Takifugu_rubripes
ENSRROG00000031473	POLR1A	100	60.667	ENSTNIG00000010116	polr1a	100	60.644	Tetraodon_nigroviridis
ENSRROG00000031473	POLR1A	74	97.345	ENSTBEG00000008646	POLR1A	70	100.000	Tupaia_belangeri
ENSRROG00000031473	POLR1A	100	85.714	ENSTTRG00000008597	POLR1A	100	85.308	Tursiops_truncatus
ENSRROG00000031473	POLR1A	78	88.351	ENSUAMG00000012158	-	94	90.295	Ursus_americanus
ENSRROG00000031473	POLR1A	100	89.663	ENSUMAG00000006700	POLR1A	100	89.431	Ursus_maritimus
ENSRROG00000031473	POLR1A	100	90.192	ENSVVUG00000001245	POLR1A	100	90.006	Vulpes_vulpes
ENSRROG00000031473	POLR1A	100	67.843	ENSXETG00000001952	polr1a	100	69.258	Xenopus_tropicalis
ENSRROG00000031473	POLR1A	100	65.645	ENSXMAG00000004032	polr1a	100	64.638	Xiphophorus_maculatus