EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000032240 (Gene tree)
Gene ID: 104656047
Gene Symbol: -
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 2798 bases
Position: chrKN299711.1:284541-287338
Accession: 104656047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000016178	RRM_1	PF00076.22	4.1e-15	1	1
ENSRROP00000016174	RRM_1	PF00076.22	7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000040319	-	750	-	ENSRROP00000016174	249 (aa)	-	A0A2K6PI90
ENSRROT00000040323	-	828	XM_010355652	ENSRROP00000016178	275 (aa)	XP_010353954	A0A2K6PI07

Gene Model

Click here to download ENSRROG00000032240's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03015	mRNA surveillance pathway	KEGG
rro05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000032240's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000032240	-	53	48.684	ENSRROG00000036409	-	59	43.137
ENSRROG00000032240	-	53	57.895	ENSRROG00000045535	BCL2L2-PABPN1	84	57.895
ENSRROG00000032240	-	72	46.000	ENSRROG00000040409	-	70	46.000
ENSRROG00000032240	-	99	94.161	ENSRROG00000035483	-	99	94.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000032240	-	100	90.647	ENSG00000205022	PABPN1L	100	92.086	Homo_sapiens
ENSRROG00000032240	-	57	56.522	ENSACIG00000021400	PABPN1L	94	55.882	Amphilophus_citrinellus
ENSRROG00000032240	-	59	52.096	ENSAOCG00000019844	PABPN1L	71	51.208	Amphiprion_ocellaris
ENSRROG00000032240	-	59	52.096	ENSAPEG00000019534	PABPN1L	71	51.208	Amphiprion_percula
ENSRROG00000032240	-	71	59.794	ENSACAG00000013250	PABPN1L	99	59.794	Anolis_carolinensis
ENSRROG00000032240	-	100	79.710	ENSANAG00000038178	PABPN1L	100	80.797	Aotus_nancymaae
ENSRROG00000032240	-	73	49.751	ENSACLG00000025147	PABPN1L	71	50.495	Astatotilapia_calliptera
ENSRROG00000032240	-	58	55.625	ENSAMXG00000010873	PABPN1L	71	52.910	Astyanax_mexicanus
ENSRROG00000032240	-	100	67.742	ENSBTAG00000023752	-	100	67.742	Bos_taurus
ENSRROG00000032240	-	51	79.433	ENSBTAG00000006727	-	86	79.433	Bos_taurus
ENSRROG00000032240	-	100	80.435	ENSCJAG00000045284	PABPN1L	100	80.797	Callithrix_jacchus
ENSRROG00000032240	-	99	63.830	ENSCHIG00000013987	PABPN1L	100	59.524	Capra_hircus
ENSRROG00000032240	-	95	67.286	ENSCAPG00000007240	PABPN1L	100	66.296	Cavia_aperea
ENSRROG00000032240	-	100	69.091	ENSCPOG00000025951	PABPN1L	100	68.116	Cavia_porcellus
ENSRROG00000032240	-	100	82.971	ENSCCAG00000027631	PABPN1L	100	81.884	Cebus_capucinus
ENSRROG00000032240	-	100	95.273	ENSCATG00000031060	PABPN1L	100	95.273	Cercocebus_atys
ENSRROG00000032240	-	100	71.739	ENSCLAG00000000704	PABPN1L	100	70.652	Chinchilla_lanigera
ENSRROG00000032240	-	100	89.003	ENSCSAG00000002881	PABPN1L	100	89.003	Chlorocebus_sabaeus
ENSRROG00000032240	-	71	57.653	ENSCPBG00000023441	PABPN1L	61	59.391	Chrysemys_picta_bellii
ENSRROG00000032240	-	100	91.667	ENSCANG00000039336	PABPN1L	100	90.580	Colobus_angolensis_palliatus
ENSRROG00000032240	-	100	74.275	ENSCGRG00001013211	Pabpn1l	100	73.188	Cricetulus_griseus_chok1gshd
ENSRROG00000032240	-	100	74.275	ENSCGRG00000015868	Pabpn1l	100	73.188	Cricetulus_griseus_crigri
ENSRROG00000032240	-	59	52.761	ENSCSEG00000001142	pabpn1l	71	50.246	Cynoglossus_semilaevis
ENSRROG00000032240	-	100	59.364	ENSDNOG00000034677	PABPN1L	100	59.011	Dasypus_novemcinctus
ENSRROG00000032240	-	100	72.043	ENSEASG00005000777	PABPN1L	100	70.609	Equus_asinus_asinus
ENSRROG00000032240	-	100	72.760	ENSECAG00000000378	PABPN1L	100	71.326	Equus_caballus
ENSRROG00000032240	-	100	61.232	ENSEEUG00000004747	PABPN1L	100	60.507	Erinaceus_europaeus
ENSRROG00000032240	-	64	54.237	ENSELUG00000018385	PABPN1L	63	56.805	Esox_lucius
ENSRROG00000032240	-	100	71.685	ENSFCAG00000010465	PABPN1L	100	71.685	Felis_catus
ENSRROG00000032240	-	73	56.436	ENSFALG00000003319	PABPN1L	80	56.219	Ficedula_albicollis
ENSRROG00000032240	-	100	70.290	ENSFDAG00000021067	PABPN1L	100	68.841	Fukomys_damarensis
ENSRROG00000032240	-	59	52.761	ENSFHEG00000018295	PABPN1L	71	51.961	Fundulus_heteroclitus
ENSRROG00000032240	-	55	54.000	ENSGMOG00000001475	PABPN1L	68	53.125	Gadus_morhua
ENSRROG00000032240	-	56	66.242	ENSGALG00000006242	PABPN1L	89	66.242	Gallus_gallus
ENSRROG00000032240	-	59	52.695	ENSGAFG00000012565	PABPN1L	71	50.971	Gambusia_affinis
ENSRROG00000032240	-	59	52.096	ENSGACG00000015428	PABPN1L	72	50.244	Gasterosteus_aculeatus
ENSRROG00000032240	-	65	59.444	ENSGAGG00000010613	PABPN1L	59	59.444	Gopherus_agassizii
ENSRROG00000032240	-	100	93.818	ENSGGOG00000012670	PABPN1L	100	93.818	Gorilla_gorilla
ENSRROG00000032240	-	73	49.000	ENSHBUG00000002388	PABPN1L	71	51.232	Haplochromis_burtoni
ENSRROG00000032240	-	96	69.318	ENSHGLG00000014207	PABPN1L	100	68.939	Heterocephalus_glaber_female
ENSRROG00000032240	-	96	69.318	ENSHGLG00100005230	PABPN1L	100	68.939	Heterocephalus_glaber_male
ENSRROG00000032240	-	62	49.718	ENSHCOG00000004151	PABPN1L	72	49.524	Hippocampus_comes
ENSRROG00000032240	-	59	53.704	ENSIPUG00000023583	PABPN1L	90	52.632	Ictalurus_punctatus
ENSRROG00000032240	-	100	68.571	ENSSTOG00000020814	PABPN1L	100	67.742	Ictidomys_tridecemlineatus
ENSRROG00000032240	-	100	69.675	ENSJJAG00000006433	Pabpn1l	100	68.116	Jaculus_jaculus
ENSRROG00000032240	-	59	51.497	ENSLBEG00000011647	PABPN1L	69	50.718	Labrus_bergylta
ENSRROG00000032240	-	71	65.816	ENSLAFG00000025902	-	78	65.816	Loxodonta_africana
ENSRROG00000032240	-	100	95.273	ENSMFAG00000002924	PABPN1L	100	95.273	Macaca_fascicularis
ENSRROG00000032240	-	100	94.545	ENSMMUG00000012438	PABPN1L	100	94.545	Macaca_mulatta
ENSRROG00000032240	-	100	94.909	ENSMNEG00000044808	PABPN1L	100	94.909	Macaca_nemestrina
ENSRROG00000032240	-	100	94.909	ENSMLEG00000032667	PABPN1L	100	94.909	Mandrillus_leucophaeus
ENSRROG00000032240	-	73	49.751	ENSMZEG00005002186	PABPN1L	71	50.495	Maylandia_zebra
ENSRROG00000032240	-	100	69.091	ENSMAUG00000014032	Pabpn1l	100	69.203	Mesocricetus_auratus
ENSRROG00000032240	-	100	78.623	ENSMICG00000028179	PABPN1L	100	78.261	Microcebus_murinus
ENSRROG00000032240	-	100	68.478	ENSMOCG00000007955	Pabpn1l	100	67.754	Microtus_ochrogaster
ENSRROG00000032240	-	100	55.197	ENSMODG00000003873	-	100	53.405	Monodelphis_domestica
ENSRROG00000032240	-	61	52.976	ENSMALG00000016926	PABPN1L	71	50.962	Monopterus_albus
ENSRROG00000032240	-	100	66.667	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	66.667	Mus_caroli
ENSRROG00000032240	-	100	66.304	ENSMUSG00000069867	Pabpn1l	100	66.304	Mus_musculus
ENSRROG00000032240	-	100	67.754	MGP_PahariEiJ_G0023268	Pabpn1l	100	67.754	Mus_pahari
ENSRROG00000032240	-	100	65.942	MGP_SPRETEiJ_G0032788	Pabpn1l	100	65.942	Mus_spretus
ENSRROG00000032240	-	96	54.152	ENSMLUG00000003228	PABPN1L	95	53.791	Myotis_lucifugus
ENSRROG00000032240	-	100	73.551	ENSNGAG00000023992	Pabpn1l	100	71.377	Nannospalax_galili
ENSRROG00000032240	-	54	57.333	ENSNBRG00000017078	PABPN1L	73	51.852	Neolamprologus_brichardi
ENSRROG00000032240	-	100	71.119	ENSOPRG00000005597	PABPN1L	100	70.397	Ochotona_princeps
ENSRROG00000032240	-	100	63.322	ENSODEG00000004649	PABPN1L	100	63.322	Octodon_degus
ENSRROG00000032240	-	100	53.261	ENSOANG00000013901	PABPN1L	100	55.072	Ornithorhynchus_anatinus
ENSRROG00000032240	-	73	50.476	ENSORLG00000026560	PABPN1L	75	51.980	Oryzias_latipes
ENSRROG00000032240	-	71	51.980	ENSORLG00020015068	PABPN1L	75	51.980	Oryzias_latipes_hni
ENSRROG00000032240	-	73	50.476	ENSORLG00015000397	PABPN1L	75	51.980	Oryzias_latipes_hsok
ENSRROG00000032240	-	73	50.476	ENSOMEG00000017896	PABPN1L	54	51.741	Oryzias_melastigma
ENSRROG00000032240	-	100	76.895	ENSOGAG00000000433	PABPN1L	100	76.087	Otolemur_garnettii
ENSRROG00000032240	-	100	65.686	ENSOARG00000013682	PABPN1L	100	65.686	Ovis_aries
ENSRROG00000032240	-	100	90.288	ENSPPAG00000028866	PABPN1L	100	91.367	Pan_paniscus
ENSRROG00000032240	-	100	72.043	ENSPPRG00000015106	PABPN1L	100	72.043	Panthera_pardus
ENSRROG00000032240	-	93	65.370	ENSPTIG00000015606	PABPN1L	100	65.370	Panthera_tigris_altaica
ENSRROG00000032240	-	100	90.288	ENSPTRG00000031120	PABPN1L	100	91.367	Pan_troglodytes
ENSRROG00000032240	-	100	95.636	ENSPANG00000026039	PABPN1L	100	95.636	Papio_anubis
ENSRROG00000032240	-	70	55.276	ENSPSIG00000003404	PABPN1L	100	56.784	Pelodiscus_sinensis
ENSRROG00000032240	-	100	70.652	ENSPEMG00000016624	Pabpn1l	100	69.565	Peromyscus_maniculatus_bairdii
ENSRROG00000032240	-	52	63.889	ENSPCIG00000007038	-	100	63.889	Phascolarctos_cinereus
ENSRROG00000032240	-	59	52.695	ENSPFOG00000007001	PABPN1L	89	43.348	Poecilia_formosa
ENSRROG00000032240	-	59	52.695	ENSPLAG00000018431	PABPN1L	71	50.971	Poecilia_latipinna
ENSRROG00000032240	-	59	52.695	ENSPMEG00000009108	PABPN1L	71	50.971	Poecilia_mexicana
ENSRROG00000032240	-	100	89.568	ENSPPYG00000007655	PABPN1L	100	90.288	Pongo_abelii
ENSRROG00000032240	-	100	75.273	ENSPCOG00000024077	PABPN1L	100	76.087	Propithecus_coquereli
ENSRROG00000032240	-	100	69.504	ENSPVAG00000002716	PABPN1L	100	68.794	Pteropus_vampyrus
ENSRROG00000032240	-	73	49.751	ENSPNYG00000004803	PABPN1L	71	50.495	Pundamilia_nyererei
ENSRROG00000032240	-	100	69.928	ENSRNOG00000029558	Pabpn1l	100	68.000	Rattus_norvegicus
ENSRROG00000032240	-	100	99.197	ENSRBIG00000030740	PABPN1L	100	99.197	Rhinopithecus_bieti
ENSRROG00000032240	-	100	80.797	ENSSBOG00000018410	PABPN1L	100	81.522	Saimiri_boliviensis_boliviensis
ENSRROG00000032240	-	100	52.881	ENSSHAG00000010001	-	100	52.881	Sarcophilus_harrisii
ENSRROG00000032240	-	59	53.049	ENSSMAG00000021348	PABPN1L	72	50.725	Scophthalmus_maximus
ENSRROG00000032240	-	59	52.096	ENSSDUG00000006986	PABPN1L	71	50.239	Seriola_dumerili
ENSRROG00000032240	-	59	52.695	ENSSLDG00000021845	PABPN1L	71	50.718	Seriola_lalandi_dorsalis
ENSRROG00000032240	-	94	53.668	ENSSARG00000005178	-	99	50.579	Sorex_araneus
ENSRROG00000032240	-	70	59.067	ENSSPUG00000007031	PABPN1L	84	60.825	Sphenodon_punctatus
ENSRROG00000032240	-	73	50.485	ENSSPAG00000017978	PABPN1L	71	50.962	Stegastes_partitus
ENSRROG00000032240	-	100	67.143	ENSSSCG00000036367	PABPN1L	100	68.085	Sus_scrofa
ENSRROG00000032240	-	59	54.167	ENSTRUG00000024725	PABPN1L	81	51.675	Takifugu_rubripes
ENSRROG00000032240	-	100	67.266	ENSTTRG00000004691	PABPN1L	100	68.817	Tursiops_truncatus
ENSRROG00000032240	-	60	53.448	ENSXETG00000011258	pabpn1l	96	51.584	Xenopus_tropicalis