EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000032517 (Gene tree)
Gene ID: 104662187
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 15174 bases
Position: chrKN295458.1:12557-27730
Accession: 104662187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000016819	MBD	PF01429.19	3.9e-16	1	1
ENSRROP00000016822	MBD	PF01429.19	4e-16	1	1
ENSRROP00000016828	MBD	PF01429.19	4.1e-16	1	1
ENSRROP00000016793	MBD	PF01429.19	4.3e-16	1	1
ENSRROP00000016817	MBD	PF01429.19	4.5e-16	1	1
ENSRROP00000016802	MBD	PF01429.19	4.9e-16	1	1
ENSRROP00000016814	MBD	PF01429.19	4.9e-16	1	1
ENSRROP00000016826	MBD	PF01429.19	4.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000040978	MBD1-208	1893	-	ENSRROP00000016828	630 (aa)	-	A0A2K6PJV5
ENSRROT00000040969	MBD1-205	2948	XM_010363165	ENSRROP00000016819	503 (aa)	XP_010361467	A0A2K6PK18
ENSRROT00000040972	MBD1-206	2303	XM_010363158	ENSRROP00000016822	536 (aa)	XP_010361460	A0A2K6PJU9
ENSRROT00000040967	MBD1-204	3086	XM_010363162	ENSRROP00000016817	549 (aa)	XP_010361464	A0A2K6PJU4
ENSRROT00000040964	MBD1-203	3254	XM_010363153	ENSRROP00000016814	605 (aa)	XP_010361455	A0A2K6PJT0
ENSRROT00000040976	MBD1-207	6193	XM_010363151	ENSRROP00000016826	614 (aa)	XP_010361453	A0A2K6PJV2
ENSRROT00000040952	MBD1-202	5249	XM_010363152	ENSRROP00000016802	605 (aa)	XP_010361454	A0A2K6PJT0
ENSRROT00000040942	MBD1-201	2844	XM_010363159	ENSRROP00000016793	567 (aa)	XP_010361461	A0A2K6PJR8

Gene Model

Click here to download ENSRROG00000032517's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000032517's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000032517	MBD1	100	99.365	ENSG00000141644	MBD1	100	99.365	Homo_sapiens
ENSRROG00000032517	MBD1	100	87.342	ENSAMEG00000000238	MBD1	96	86.709	Ailuropoda_melanoleuca
ENSRROG00000032517	MBD1	67	44.059	ENSACAG00000006091	-	100	45.521	Anolis_carolinensis
ENSRROG00000032517	MBD1	100	96.190	ENSANAG00000036253	MBD1	100	96.190	Aotus_nancymaae
ENSRROG00000032517	MBD1	100	86.688	ENSBTAG00000003801	MBD1	100	86.846	Bos_taurus
ENSRROG00000032517	MBD1	100	94.860	ENSCJAG00000004959	MBD1	100	94.860	Callithrix_jacchus
ENSRROG00000032517	MBD1	100	86.371	ENSCAFG00000018928	MBD1	96	87.163	Canis_familiaris
ENSRROG00000032517	MBD1	99	85.554	ENSCAFG00020024272	MBD1	97	86.356	Canis_lupus_dingo
ENSRROG00000032517	MBD1	100	86.371	ENSCHIG00000021134	MBD1	100	86.529	Capra_hircus
ENSRROG00000032517	MBD1	100	91.111	ENSTSYG00000000509	MBD1	100	91.111	Carlito_syrichta
ENSRROG00000032517	MBD1	99	71.904	ENSCAPG00000015782	MBD1	96	71.009	Cavia_aperea
ENSRROG00000032517	MBD1	96	72.927	ENSCPOG00000001671	MBD1	100	72.586	Cavia_porcellus
ENSRROG00000032517	MBD1	100	94.165	ENSCCAG00000034600	MBD1	100	89.721	Cebus_capucinus
ENSRROG00000032517	MBD1	100	99.206	ENSCATG00000029959	MBD1	100	99.206	Cercocebus_atys
ENSRROG00000032517	MBD1	100	85.079	ENSCLAG00000007457	MBD1	89	85.079	Chinchilla_lanigera
ENSRROG00000032517	MBD1	100	99.504	ENSCSAG00000018070	MBD1	100	99.504	Chlorocebus_sabaeus
ENSRROG00000032517	MBD1	100	99.206	ENSCANG00000033425	MBD1	100	99.206	Colobus_angolensis_palliatus
ENSRROG00000032517	MBD1	100	74.548	ENSCGRG00001014843	Mbd1	100	74.548	Cricetulus_griseus_chok1gshd
ENSRROG00000032517	MBD1	99	65.683	ENSCGRG00000014135	Mbd1	83	78.879	Cricetulus_griseus_crigri
ENSRROG00000032517	MBD1	100	82.092	ENSDNOG00000015998	MBD1	100	83.360	Dasypus_novemcinctus
ENSRROG00000032517	MBD1	99	77.491	ENSDORG00000013917	Mbd1	97	78.659	Dipodomys_ordii
ENSRROG00000032517	MBD1	100	86.234	ENSEASG00005003857	MBD1	100	87.816	Equus_asinus_asinus
ENSRROG00000032517	MBD1	100	86.161	ENSECAG00000011497	MBD1	80	87.809	Equus_caballus
ENSRROG00000032517	MBD1	100	87.975	ENSFCAG00000015730	MBD1	100	87.500	Felis_catus
ENSRROG00000032517	MBD1	99	79.636	ENSFDAG00000011085	MBD1	96	80.180	Fukomys_damarensis
ENSRROG00000032517	MBD1	52	52.308	ENSGAFG00000008975	mbd1b	50	33.085	Gambusia_affinis
ENSRROG00000032517	MBD1	67	32.982	ENSGACG00000012106	-	50	60.656	Gasterosteus_aculeatus
ENSRROG00000032517	MBD1	100	99.048	ENSGGOG00000016966	MBD1	100	99.048	Gorilla_gorilla
ENSRROG00000032517	MBD1	100	85.455	ENSHGLG00000008740	MBD1	100	85.455	Heterocephalus_glaber_female
ENSRROG00000032517	MBD1	93	86.943	ENSHGLG00100005198	MBD1	100	87.948	Heterocephalus_glaber_male
ENSRROG00000032517	MBD1	60	37.748	ENSIPUG00000015243	-	50	50.602	Ictalurus_punctatus
ENSRROG00000032517	MBD1	100	83.089	ENSSTOG00000007780	MBD1	100	83.415	Ictidomys_tridecemlineatus
ENSRROG00000032517	MBD1	98	78.519	ENSJJAG00000022859	Mbd1	96	78.519	Jaculus_jaculus
ENSRROG00000032517	MBD1	78	35.071	ENSKMAG00000020760	mbd1b	50	30.100	Kryptolebias_marmoratus
ENSRROG00000032517	MBD1	96	37.165	ENSLACG00000002414	-	51	65.079	Latimeria_chalumnae
ENSRROG00000032517	MBD1	99	75.456	ENSLAFG00000031328	MBD1	97	75.456	Loxodonta_africana
ENSRROG00000032517	MBD1	100	99.048	ENSMFAG00000026335	MBD1	100	99.048	Macaca_fascicularis
ENSRROG00000032517	MBD1	100	99.048	ENSMMUG00000009050	MBD1	100	99.048	Macaca_mulatta
ENSRROG00000032517	MBD1	100	99.048	ENSMNEG00000038822	MBD1	100	99.048	Macaca_nemestrina
ENSRROG00000032517	MBD1	100	99.365	ENSMLEG00000043121	MBD1	100	99.365	Mandrillus_leucophaeus
ENSRROG00000032517	MBD1	67	36.058	ENSMAMG00000023341	-	51	59.155	Mastacembelus_armatus
ENSRROG00000032517	MBD1	53	80.297	ENSMAUG00000021798	-	97	80.297	Mesocricetus_auratus
ENSRROG00000032517	MBD1	100	89.756	ENSMICG00000006414	MBD1	100	90.081	Microcebus_murinus
ENSRROG00000032517	MBD1	52	77.567	ENSMOCG00000011976	-	93	77.567	Microtus_ochrogaster
ENSRROG00000032517	MBD1	52	52.652	ENSMODG00000024864	-	100	52.652	Monodelphis_domestica
ENSRROG00000032517	MBD1	69	45.153	ENSMODG00000001286	-	58	44.186	Monodelphis_domestica
ENSRROG00000032517	MBD1	52	58.364	ENSMODG00000025004	-	100	58.364	Monodelphis_domestica
ENSRROG00000032517	MBD1	52	57.951	ENSMODG00000010534	-	99	58.304	Monodelphis_domestica
ENSRROG00000032517	MBD1	99	67.250	ENSMUSG00000024561	Mbd1	97	67.834	Mus_musculus
ENSRROG00000032517	MBD1	100	67.886	MGP_PahariEiJ_G0019128	Mbd1	100	67.727	Mus_pahari
ENSRROG00000032517	MBD1	98	68.720	MGP_SPRETEiJ_G0023304	Mbd1	100	69.243	Mus_spretus
ENSRROG00000032517	MBD1	100	86.867	ENSMPUG00000008843	MBD1	96	86.392	Mustela_putorius_furo
ENSRROG00000032517	MBD1	100	85.079	ENSMLUG00000008286	MBD1	96	85.079	Myotis_lucifugus
ENSRROG00000032517	MBD1	98	76.545	ENSNGAG00000011412	Mbd1	96	76.545	Nannospalax_galili
ENSRROG00000032517	MBD1	97	90.816	ENSNLEG00000032711	-	88	90.816	Nomascus_leucogenys
ENSRROG00000032517	MBD1	100	98.678	ENSNLEG00000011661	-	100	98.678	Nomascus_leucogenys
ENSRROG00000032517	MBD1	100	74.545	ENSOPRG00000007647	MBD1	100	74.545	Ochotona_princeps
ENSRROG00000032517	MBD1	99	82.255	ENSODEG00000018451	MBD1	97	82.255	Octodon_degus
ENSRROG00000032517	MBD1	90	46.139	ENSOANG00000014593	-	100	48.106	Ornithorhynchus_anatinus
ENSRROG00000032517	MBD1	100	83.518	ENSOCUG00000006554	MBD1	100	83.994	Oryctolagus_cuniculus
ENSRROG00000032517	MBD1	100	87.188	ENSOGAG00000003784	MBD1	96	87.188	Otolemur_garnettii
ENSRROG00000032517	MBD1	100	86.076	ENSOARG00000004218	MBD1	95	86.234	Ovis_aries
ENSRROG00000032517	MBD1	100	99.174	ENSPPAG00000038886	MBD1	100	99.174	Pan_paniscus
ENSRROG00000032517	MBD1	100	88.138	ENSPPRG00000021387	MBD1	100	87.658	Panthera_pardus
ENSRROG00000032517	MBD1	100	88.138	ENSPTIG00000021231	MBD1	100	87.658	Panthera_tigris_altaica
ENSRROG00000032517	MBD1	100	99.206	ENSPTRG00000010021	MBD1	100	99.206	Pan_troglodytes
ENSRROG00000032517	MBD1	100	99.206	ENSPANG00000010867	MBD1	100	99.206	Papio_anubis
ENSRROG00000032517	MBD1	99	66.310	ENSPEMG00000022630	Mbd1	97	66.250	Peromyscus_maniculatus_bairdii
ENSRROG00000032517	MBD1	91	56.766	ENSPCIG00000027937	-	79	47.469	Phascolarctos_cinereus
ENSRROG00000032517	MBD1	60	53.846	ENSPFOG00000007511	mbd1b	50	32.587	Poecilia_formosa
ENSRROG00000032517	MBD1	52	53.846	ENSPLAG00000021258	mbd1b	50	32.587	Poecilia_latipinna
ENSRROG00000032517	MBD1	61	53.846	ENSPMEG00000024145	mbd1b	50	32.587	Poecilia_mexicana
ENSRROG00000032517	MBD1	52	53.846	ENSPREG00000021805	mbd1b	50	32.587	Poecilia_reticulata
ENSRROG00000032517	MBD1	100	99.174	ENSPPYG00000009158	MBD1	91	99.174	Pongo_abelii
ENSRROG00000032517	MBD1	99	76.033	ENSPCAG00000001648	MBD1	93	85.878	Procavia_capensis
ENSRROG00000032517	MBD1	100	92.409	ENSPCOG00000012450	MBD1	100	92.409	Propithecus_coquereli
ENSRROG00000032517	MBD1	99	56.838	ENSRNOG00000024104	Mbd1	86	70.124	Rattus_norvegicus
ENSRROG00000032517	MBD1	100	100.000	ENSRBIG00000041294	MBD1	100	100.000	Rhinopithecus_bieti
ENSRROG00000032517	MBD1	100	94.237	ENSSBOG00000027169	MBD1	100	91.289	Saimiri_boliviensis_boliviensis
ENSRROG00000032517	MBD1	82	43.777	ENSSHAG00000003661	-	100	47.335	Sarcophilus_harrisii
ENSRROG00000032517	MBD1	52	51.111	ENSSPAG00000021447	mbd1b	51	34.359	Stegastes_partitus
ENSRROG00000032517	MBD1	100	88.246	ENSSSCG00000004516	MBD1	100	88.246	Sus_scrofa
ENSRROG00000032517	MBD1	52	50.538	ENSTRUG00000013422	mbd1b	50	30.549	Takifugu_rubripes
ENSRROG00000032517	MBD1	73	81.148	ENSTBEG00000012651	-	68	83.333	Tupaia_belangeri
ENSRROG00000032517	MBD1	100	84.514	ENSTTRG00000015523	MBD1	100	84.020	Tursiops_truncatus
ENSRROG00000032517	MBD1	93	91.901	ENSUAMG00000004752	MBD1	100	83.663	Ursus_americanus
ENSRROG00000032517	MBD1	100	87.479	ENSUMAG00000002947	MBD1	100	86.820	Ursus_maritimus