EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000033020 (Gene tree)
Gene ID: 104674423
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 449794 bases
Position: chrKN297983.1:805508-1255301
Accession: 104674423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000017885	TUDOR	PF00567.24	7.8e-28	1	1
ENSRROP00000017892	TUDOR	PF00567.24	8e-28	1	1
ENSRROP00000017885	SNase	PF00565.17	2e-69	1	5
ENSRROP00000017885	SNase	PF00565.17	2e-69	2	5
ENSRROP00000017885	SNase	PF00565.17	2e-69	3	5
ENSRROP00000017885	SNase	PF00565.17	2e-69	4	5
ENSRROP00000017885	SNase	PF00565.17	2e-69	5	5
ENSRROP00000017892	SNase	PF00565.17	2.2e-69	1	5
ENSRROP00000017892	SNase	PF00565.17	2.2e-69	2	5
ENSRROP00000017892	SNase	PF00565.17	2.2e-69	3	5
ENSRROP00000017892	SNase	PF00565.17	2.2e-69	4	5
ENSRROP00000017892	SNase	PF00565.17	2.2e-69	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000042047	SND1-202	2760	-	ENSRROP00000017892	919 (aa)	-	A0A2K6PMY4
ENSRROT00000042040	SND1-201	4793	XM_010378725	ENSRROP00000017885	910 (aa)	XP_010377027	A0A2K6PMW7

Gene Model

Click here to download ENSRROG00000033020's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000033020's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000033020	SND1	100	99.560	ENSG00000197157	SND1	100	99.560	Homo_sapiens
ENSRROG00000033020	SND1	100	83.882	ENSAPOG00000017599	snd1	99	84.761	Acanthochromis_polyacanthus
ENSRROG00000033020	SND1	100	98.794	ENSAMEG00000004664	SND1	94	98.794	Ailuropoda_melanoleuca
ENSRROG00000033020	SND1	98	82.195	ENSACIG00000003551	snd1	99	82.071	Amphilophus_citrinellus
ENSRROG00000033020	SND1	100	83.662	ENSAOCG00000014166	snd1	99	84.538	Amphiprion_ocellaris
ENSRROG00000033020	SND1	100	83.662	ENSAPEG00000007067	snd1	99	84.538	Amphiprion_percula
ENSRROG00000033020	SND1	98	83.017	ENSATEG00000018475	snd1	88	84.265	Anabas_testudineus
ENSRROG00000033020	SND1	100	99.341	ENSANAG00000034463	SND1	100	99.341	Aotus_nancymaae
ENSRROG00000033020	SND1	99	83.187	ENSACLG00000022897	snd1	99	84.187	Astatotilapia_calliptera
ENSRROG00000033020	SND1	99	84.378	ENSAMXG00000016318	snd1	100	83.042	Astyanax_mexicanus
ENSRROG00000033020	SND1	100	98.901	ENSBTAG00000010692	SND1	100	98.901	Bos_taurus
ENSRROG00000033020	SND1	98	46.930	WBGene00006626	tsn-1	99	46.710	Caenorhabditis_elegans
ENSRROG00000033020	SND1	100	99.121	ENSCJAG00000017668	SND1	100	99.121	Callithrix_jacchus
ENSRROG00000033020	SND1	100	99.231	ENSCAFG00000001700	SND1	100	99.231	Canis_familiaris
ENSRROG00000033020	SND1	100	99.231	ENSCAFG00020021639	SND1	100	99.231	Canis_lupus_dingo
ENSRROG00000033020	SND1	100	99.231	ENSCHIG00000023390	SND1	100	99.231	Capra_hircus
ENSRROG00000033020	SND1	73	99.472	ENSTSYG00000004979	SND1	96	99.472	Carlito_syrichta
ENSRROG00000033020	SND1	99	84.667	ENSCAPG00000010677	SND1	98	84.710	Cavia_aperea
ENSRROG00000033020	SND1	100	98.132	ENSCPOG00000006251	SND1	100	98.132	Cavia_porcellus
ENSRROG00000033020	SND1	100	99.451	ENSCCAG00000036847	SND1	100	99.451	Cebus_capucinus
ENSRROG00000033020	SND1	100	100.000	ENSCATG00000035214	SND1	100	100.000	Cercocebus_atys
ENSRROG00000033020	SND1	100	98.242	ENSCLAG00000011796	SND1	100	98.242	Chinchilla_lanigera
ENSRROG00000033020	SND1	100	100.000	ENSCSAG00000010182	SND1	100	100.000	Chlorocebus_sabaeus
ENSRROG00000033020	SND1	77	90.196	ENSCHOG00000002218	SND1	86	90.196	Choloepus_hoffmanni
ENSRROG00000033020	SND1	100	92.418	ENSCPBG00000018094	SND1	98	93.386	Chrysemys_picta_bellii
ENSRROG00000033020	SND1	98	57.143	ENSCING00000000524	-	99	56.188	Ciona_intestinalis
ENSRROG00000033020	SND1	99	58.306	ENSCSAVG00000008807	-	99	58.453	Ciona_savignyi
ENSRROG00000033020	SND1	100	100.000	ENSCANG00000035119	SND1	100	100.000	Colobus_angolensis_palliatus
ENSRROG00000033020	SND1	100	97.253	ENSCGRG00001022514	Snd1	100	97.253	Cricetulus_griseus_chok1gshd
ENSRROG00000033020	SND1	97	97.285	ENSCGRG00000012277	Snd1	99	97.285	Cricetulus_griseus_crigri
ENSRROG00000033020	SND1	98	84.676	ENSCSEG00000008661	snd1	98	84.676	Cynoglossus_semilaevis
ENSRROG00000033020	SND1	100	84.101	ENSCVAG00000010316	snd1	100	83.793	Cyprinodon_variegatus
ENSRROG00000033020	SND1	100	84.775	ENSDARG00000006766	snd1	97	87.590	Danio_rerio
ENSRROG00000033020	SND1	97	96.167	ENSDNOG00000006795	SND1	100	96.167	Dasypus_novemcinctus
ENSRROG00000033020	SND1	100	98.791	ENSDORG00000000336	Snd1	100	98.791	Dipodomys_ordii
ENSRROG00000033020	SND1	98	50.703	FBgn0035121	Tudor-SN	98	50.703	Drosophila_melanogaster
ENSRROG00000033020	SND1	90	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSRROG00000033020	SND1	60	67.568	ENSEBUG00000014201	-	84	75.956	Eptatretus_burgeri
ENSRROG00000033020	SND1	100	97.624	ENSEASG00005008513	SND1	100	97.624	Equus_asinus_asinus
ENSRROG00000033020	SND1	100	99.231	ENSECAG00000011451	SND1	100	99.231	Equus_caballus
ENSRROG00000033020	SND1	100	86.923	ENSEEUG00000014737	SND1	100	86.923	Erinaceus_europaeus
ENSRROG00000033020	SND1	99	82.346	ENSELUG00000001805	snd1	95	83.278	Esox_lucius
ENSRROG00000033020	SND1	100	99.231	ENSFCAG00000008289	SND1	100	99.231	Felis_catus
ENSRROG00000033020	SND1	100	98.462	ENSFDAG00000015881	SND1	100	98.462	Fukomys_damarensis
ENSRROG00000033020	SND1	99	82.416	ENSFHEG00000004093	snd1	98	84.162	Fundulus_heteroclitus
ENSRROG00000033020	SND1	64	75.141	ENSGMOG00000018932	snd1	64	75.141	Gadus_morhua
ENSRROG00000033020	SND1	100	84.320	ENSGAFG00000008421	snd1	99	85.327	Gambusia_affinis
ENSRROG00000033020	SND1	100	53.855	ENSGACG00000019793	snd1	98	54.314	Gasterosteus_aculeatus
ENSRROG00000033020	SND1	100	99.780	ENSGGOG00000009614	SND1	100	99.780	Gorilla_gorilla
ENSRROG00000033020	SND1	99	83.700	ENSHBUG00000019135	snd1	99	84.187	Haplochromis_burtoni
ENSRROG00000033020	SND1	100	98.132	ENSHGLG00000003618	SND1	100	98.132	Heterocephalus_glaber_female
ENSRROG00000033020	SND1	99	97.680	ENSHGLG00100012449	SND1	100	97.680	Heterocephalus_glaber_male
ENSRROG00000033020	SND1	100	82.785	ENSHCOG00000005266	snd1	98	84.004	Hippocampus_comes
ENSRROG00000033020	SND1	100	82.713	ENSIPUG00000013279	snd1	98	83.742	Ictalurus_punctatus
ENSRROG00000033020	SND1	100	98.791	ENSSTOG00000002140	SND1	100	98.791	Ictidomys_tridecemlineatus
ENSRROG00000033020	SND1	100	98.901	ENSJJAG00000009561	Snd1	100	98.901	Jaculus_jaculus
ENSRROG00000033020	SND1	100	84.101	ENSKMAG00000016997	snd1	99	84.129	Kryptolebias_marmoratus
ENSRROG00000033020	SND1	100	85.067	ENSLBEG00000013563	snd1	99	83.760	Labrus_bergylta
ENSRROG00000033020	SND1	99	85.557	ENSLOCG00000015537	snd1	98	85.557	Lepisosteus_oculatus
ENSRROG00000033020	SND1	100	98.462	ENSLAFG00000009696	SND1	100	98.462	Loxodonta_africana
ENSRROG00000033020	SND1	100	100.000	ENSMFAG00000038114	SND1	100	100.000	Macaca_fascicularis
ENSRROG00000033020	SND1	100	100.000	ENSMMUG00000015432	SND1	100	100.000	Macaca_mulatta
ENSRROG00000033020	SND1	100	100.000	ENSMNEG00000039808	SND1	100	100.000	Macaca_nemestrina
ENSRROG00000033020	SND1	100	99.890	ENSMLEG00000029040	SND1	100	99.890	Mandrillus_leucophaeus
ENSRROG00000033020	SND1	99	83.903	ENSMAMG00000011739	snd1	98	84.598	Mastacembelus_armatus
ENSRROG00000033020	SND1	99	83.187	ENSMZEG00005005681	snd1	99	84.187	Maylandia_zebra
ENSRROG00000033020	SND1	100	99.341	ENSMICG00000000097	SND1	100	99.341	Microcebus_murinus
ENSRROG00000033020	SND1	100	98.132	ENSMOCG00000005040	Snd1	100	98.132	Microtus_ochrogaster
ENSRROG00000033020	SND1	100	83.443	ENSMMOG00000001795	snd1	99	84.316	Mola_mola
ENSRROG00000033020	SND1	99	95.987	ENSMODG00000015182	SND1	99	95.987	Monodelphis_domestica
ENSRROG00000033020	SND1	100	83.333	ENSMALG00000012071	snd1	98	84.152	Monopterus_albus
ENSRROG00000033020	SND1	100	97.802	MGP_CAROLIEiJ_G0028159	Snd1	100	97.802	Mus_caroli
ENSRROG00000033020	SND1	100	97.582	ENSMUSG00000001424	Snd1	100	97.582	Mus_musculus
ENSRROG00000033020	SND1	100	97.802	MGP_PahariEiJ_G0021917	Snd1	100	98.482	Mus_pahari
ENSRROG00000033020	SND1	100	97.802	MGP_SPRETEiJ_G0029159	Snd1	100	97.802	Mus_spretus
ENSRROG00000033020	SND1	100	98.571	ENSMPUG00000006545	SND1	100	98.571	Mustela_putorius_furo
ENSRROG00000033020	SND1	97	97.318	ENSMLUG00000017130	SND1	99	97.318	Myotis_lucifugus
ENSRROG00000033020	SND1	100	98.132	ENSNGAG00000011186	Snd1	100	98.132	Nannospalax_galili
ENSRROG00000033020	SND1	99	83.077	ENSNBRG00000006681	snd1	99	84.076	Neolamprologus_brichardi
ENSRROG00000033020	SND1	100	99.670	ENSNLEG00000012263	SND1	100	99.774	Nomascus_leucogenys
ENSRROG00000033020	SND1	93	100.000	ENSOPRG00000013405	SND1	92	100.000	Ochotona_princeps
ENSRROG00000033020	SND1	100	98.462	ENSODEG00000011502	SND1	100	98.462	Octodon_degus
ENSRROG00000033020	SND1	99	83.077	ENSONIG00000011481	snd1	96	84.076	Oreochromis_niloticus
ENSRROG00000033020	SND1	98	94.482	ENSOANG00000000817	SND1	99	93.868	Ornithorhynchus_anatinus
ENSRROG00000033020	SND1	100	97.582	ENSOCUG00000001620	SND1	100	97.582	Oryctolagus_cuniculus
ENSRROG00000033020	SND1	98	84.022	ENSORLG00000015201	snd1	98	84.022	Oryzias_latipes
ENSRROG00000033020	SND1	98	84.134	ENSORLG00020013991	snd1	98	84.134	Oryzias_latipes_hni
ENSRROG00000033020	SND1	98	84.134	ENSORLG00015012436	snd1	98	84.134	Oryzias_latipes_hsok
ENSRROG00000033020	SND1	100	83.224	ENSOMEG00000006406	snd1	99	83.463	Oryzias_melastigma
ENSRROG00000033020	SND1	100	99.232	ENSOGAG00000013356	SND1	94	99.232	Otolemur_garnettii
ENSRROG00000033020	SND1	97	96.271	ENSOARG00000002149	SND1	100	96.271	Ovis_aries
ENSRROG00000033020	SND1	100	99.670	ENSPPAG00000042947	SND1	100	99.670	Pan_paniscus
ENSRROG00000033020	SND1	100	99.231	ENSPPRG00000004494	SND1	100	99.231	Panthera_pardus
ENSRROG00000033020	SND1	100	99.121	ENSPTIG00000014214	SND1	100	99.121	Panthera_tigris_altaica
ENSRROG00000033020	SND1	100	99.670	ENSPTRG00000023911	SND1	100	99.670	Pan_troglodytes
ENSRROG00000033020	SND1	97	100.000	ENSPANG00000011997	SND1	99	100.000	Papio_anubis
ENSRROG00000033020	SND1	99	81.588	ENSPKIG00000023494	snd1	98	81.909	Paramormyrops_kingsleyae
ENSRROG00000033020	SND1	92	83.234	ENSPMGG00000003629	snd1	100	83.234	Periophthalmus_magnuspinnatus
ENSRROG00000033020	SND1	100	98.022	ENSPEMG00000010240	Snd1	100	98.022	Peromyscus_maniculatus_bairdii
ENSRROG00000033020	SND1	97	73.559	ENSPMAG00000007915	-	99	73.559	Petromyzon_marinus
ENSRROG00000033020	SND1	100	96.484	ENSPCIG00000011561	SND1	100	96.484	Phascolarctos_cinereus
ENSRROG00000033020	SND1	100	83.991	ENSPFOG00000001557	snd1	99	84.872	Poecilia_formosa
ENSRROG00000033020	SND1	100	83.991	ENSPLAG00000018459	snd1	96	84.872	Poecilia_latipinna
ENSRROG00000033020	SND1	100	84.430	ENSPMEG00000006803	snd1	99	85.317	Poecilia_mexicana
ENSRROG00000033020	SND1	100	84.101	ENSPREG00000002189	snd1	99	84.983	Poecilia_reticulata
ENSRROG00000033020	SND1	93	99.628	ENSPPYG00000017972	SND1	100	99.628	Pongo_abelii
ENSRROG00000033020	SND1	100	86.813	ENSPCAG00000011305	SND1	99	86.734	Procavia_capensis
ENSRROG00000033020	SND1	100	99.560	ENSPCOG00000026791	SND1	100	99.560	Propithecus_coquereli
ENSRROG00000033020	SND1	100	97.143	ENSPVAG00000013945	SND1	100	97.143	Pteropus_vampyrus
ENSRROG00000033020	SND1	99	83.187	ENSPNYG00000000932	snd1	99	84.187	Pundamilia_nyererei
ENSRROG00000033020	SND1	100	83.479	ENSPNAG00000001206	snd1	100	82.969	Pygocentrus_nattereri
ENSRROG00000033020	SND1	99	97.467	ENSRNOG00000031173	Snd1	99	97.467	Rattus_norvegicus
ENSRROG00000033020	SND1	76	96.991	ENSRBIG00000027782	-	93	99.810	Rhinopithecus_bieti
ENSRROG00000033020	SND1	100	99.341	ENSSBOG00000032461	SND1	100	99.341	Saimiri_boliviensis_boliviensis
ENSRROG00000033020	SND1	98	93.018	ENSSHAG00000015359	SND1	100	93.018	Sarcophilus_harrisii
ENSRROG00000033020	SND1	100	82.372	ENSSFOG00015001103	snd1	98	83.463	Scleropages_formosus
ENSRROG00000033020	SND1	98	84.004	ENSSMAG00000001932	snd1	95	81.987	Scophthalmus_maximus
ENSRROG00000033020	SND1	100	83.662	ENSSDUG00000002699	snd1	92	84.538	Seriola_dumerili
ENSRROG00000033020	SND1	100	76.425	ENSSLDG00000001950	snd1	98	77.197	Seriola_lalandi_dorsalis
ENSRROG00000033020	SND1	86	96.226	ENSSARG00000004877	SND1	92	96.226	Sorex_araneus
ENSRROG00000033020	SND1	73	87.826	ENSSPUG00000017586	SND1	96	87.826	Sphenodon_punctatus
ENSRROG00000033020	SND1	76	84.772	ENSSPAG00000021398	snd1	96	86.911	Stegastes_partitus
ENSRROG00000033020	SND1	100	98.901	ENSSSCG00000016590	SND1	100	98.901	Sus_scrofa
ENSRROG00000033020	SND1	99	83.394	ENSTRUG00000014067	snd1	98	83.893	Takifugu_rubripes
ENSRROG00000033020	SND1	100	83.443	ENSTNIG00000011019	snd1	98	84.452	Tetraodon_nigroviridis
ENSRROG00000033020	SND1	93	93.160	ENSTBEG00000003999	SND1	100	93.160	Tupaia_belangeri
ENSRROG00000033020	SND1	100	94.286	ENSTTRG00000006059	SND1	100	94.286	Tursiops_truncatus
ENSRROG00000033020	SND1	71	90.390	ENSUAMG00000002820	-	86	90.323	Ursus_americanus
ENSRROG00000033020	SND1	91	98.859	ENSUAMG00000005604	-	93	98.859	Ursus_americanus
ENSRROG00000033020	SND1	100	99.011	ENSUMAG00000005960	SND1	100	99.011	Ursus_maritimus
ENSRROG00000033020	SND1	77	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSRROG00000033020	SND1	100	99.011	ENSVVUG00000007226	SND1	100	99.011	Vulpes_vulpes
ENSRROG00000033020	SND1	97	84.746	ENSXETG00000023043	snd1	100	84.668	Xenopus_tropicalis
ENSRROG00000033020	SND1	92	81.591	ENSXCOG00000013629	snd1	99	81.591	Xiphophorus_couchianus
ENSRROG00000033020	SND1	100	84.320	ENSXMAG00000011469	snd1	99	85.206	Xiphophorus_maculatus