EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000033576 (Gene tree)
Gene ID: 104681677
Gene Symbol: APOBEC1
Alias: APOBEC-1|BEDP|CDAR1|HEPR
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 9274 bases
Position: chrKN299096.1:310983-320256
Accession: 104681677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000019101	APOBEC_N	PF08210.11	2.3e-27	1	1
ENSRROP00000019102	APOBEC_N	PF08210.11	3.7e-27	1	1
ENSRROP00000019102	APOBEC_C	PF05240.14	2.6e-23	1	1
ENSRROP00000019101	APOBEC_C	PF05240.14	4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000043266	APOBEC1-201	888	XM_010388026	ENSRROP00000019101	236 (aa)	XP_010386328	A0A2K6PRF1
ENSRROT00000043267	APOBEC1-202	778	XM_010388027	ENSRROP00000019102	191 (aa)	XP_010386329	A0A2K6PRF3

Gene Model

Click here to download ENSRROG00000033576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000033576's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000033576	APOBEC1	53	33.981	ENSRROG00000024699	APOBEC3H	65	31.298
ENSRROG00000033576	APOBEC1	62	41.250	ENSRROG00000029996	-	55	41.250
ENSRROG00000033576	APOBEC1	70	35.652	ENSRROG00000029045	APOBEC3C	56	35.652
ENSRROG00000033576	APOBEC1	57	42.857	ENSRROG00000028773	APOBEC3G	51	35.417
ENSRROG00000033576	APOBEC1	54	40.741	ENSRROG00000028557	-	53	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000033576	APOBEC1	100	92.797	ENSG00000111701	APOBEC1	100	92.797	Homo_sapiens
ENSRROG00000033576	APOBEC1	99	81.053	ENSAMEG00000007098	APOBEC1	98	80.519	Ailuropoda_melanoleuca
ENSRROG00000033576	APOBEC1	72	40.351	ENSACAG00000028578	-	93	40.351	Anolis_carolinensis
ENSRROG00000033576	APOBEC1	99	91.053	ENSANAG00000027743	APOBEC1	95	89.831	Aotus_nancymaae
ENSRROG00000033576	APOBEC1	100	72.881	ENSBTAG00000014683	APOBEC1	100	72.881	Bos_taurus
ENSRROG00000033576	APOBEC1	100	91.099	ENSCJAG00000005398	APOBEC1	100	90.045	Callithrix_jacchus
ENSRROG00000033576	APOBEC1	100	80.085	ENSCAFG00000013901	APOBEC1	100	80.085	Canis_familiaris
ENSRROG00000033576	APOBEC1	99	81.053	ENSCAFG00020003511	APOBEC1	95	79.646	Canis_lupus_dingo
ENSRROG00000033576	APOBEC1	99	75.263	ENSCHIG00000011898	APOBEC1	96	74.026	Capra_hircus
ENSRROG00000033576	APOBEC1	60	81.560	ENSTSYG00000029141	APOBEC1	100	81.560	Carlito_syrichta
ENSRROG00000033576	APOBEC1	95	69.613	ENSCAPG00000015882	-	99	68.692	Cavia_aperea
ENSRROG00000033576	APOBEC1	99	67.234	ENSCPOG00000033068	APOBEC1	99	67.234	Cavia_porcellus
ENSRROG00000033576	APOBEC1	100	92.670	ENSCCAG00000022258	APOBEC1	100	91.525	Cebus_capucinus
ENSRROG00000033576	APOBEC1	100	96.610	ENSCATG00000021613	APOBEC1	95	96.610	Cercocebus_atys
ENSRROG00000033576	APOBEC1	97	70.306	ENSCLAG00000014645	APOBEC1	99	70.306	Chinchilla_lanigera
ENSRROG00000033576	APOBEC1	100	94.764	ENSCSAG00000009817	APOBEC1	100	94.764	Chlorocebus_sabaeus
ENSRROG00000033576	APOBEC1	57	78.704	ENSCHOG00000002355	-	89	78.704	Choloepus_hoffmanni
ENSRROG00000033576	APOBEC1	87	46.429	ENSCPBG00000014328	-	82	47.872	Chrysemys_picta_bellii
ENSRROG00000033576	APOBEC1	87	47.619	ENSCPBG00000014327	-	81	39.151	Chrysemys_picta_bellii
ENSRROG00000033576	APOBEC1	77	45.455	ENSCPBG00000017398	-	82	45.455	Chrysemys_picta_bellii
ENSRROG00000033576	APOBEC1	78	45.989	ENSCPBG00000014335	-	76	45.989	Chrysemys_picta_bellii
ENSRROG00000033576	APOBEC1	85	48.466	ENSCPBG00000014329	-	54	49.490	Chrysemys_picta_bellii
ENSRROG00000033576	APOBEC1	94	40.889	ENSCPBG00000014331	-	90	40.889	Chrysemys_picta_bellii
ENSRROG00000033576	APOBEC1	100	96.859	ENSCANG00000038359	APOBEC1	100	97.391	Colobus_angolensis_palliatus
ENSRROG00000033576	APOBEC1	97	71.179	ENSCGRG00001011130	Apobec1	100	71.179	Cricetulus_griseus_chok1gshd
ENSRROG00000033576	APOBEC1	97	71.179	ENSCGRG00000008644	Apobec1	100	71.179	Cricetulus_griseus_crigri
ENSRROG00000033576	APOBEC1	100	78.814	ENSDNOG00000010926	APOBEC1	100	78.814	Dasypus_novemcinctus
ENSRROG00000033576	APOBEC1	95	65.027	ENSDORG00000023717	Apobec1	100	65.421	Dipodomys_ordii
ENSRROG00000033576	APOBEC1	99	78.298	ENSETEG00000004867	APOBEC1	99	78.298	Echinops_telfairi
ENSRROG00000033576	APOBEC1	100	82.199	ENSEASG00005015951	APOBEC1	97	81.818	Equus_asinus_asinus
ENSRROG00000033576	APOBEC1	100	82.199	ENSECAG00000017163	APOBEC1	100	82.199	Equus_caballus
ENSRROG00000033576	APOBEC1	91	51.445	ENSEEUG00000007530	-	97	53.922	Erinaceus_europaeus
ENSRROG00000033576	APOBEC1	98	65.608	ENSEEUG00000009112	-	98	65.611	Erinaceus_europaeus
ENSRROG00000033576	APOBEC1	100	81.780	ENSFCAG00000009350	APOBEC1	100	81.780	Felis_catus
ENSRROG00000033576	APOBEC1	58	49.541	ENSFALG00000007257	-	70	46.154	Ficedula_albicollis
ENSRROG00000033576	APOBEC1	98	59.893	ENSFDAG00000018470	APOBEC1	99	59.903	Fukomys_damarensis
ENSRROG00000033576	APOBEC1	72	49.286	ENSGAGG00000004947	-	83	52.632	Gopherus_agassizii
ENSRROG00000033576	APOBEC1	72	51.799	ENSGAGG00000006624	-	62	49.708	Gopherus_agassizii
ENSRROG00000033576	APOBEC1	79	48.000	ENSGAGG00000021744	-	71	46.995	Gopherus_agassizii
ENSRROG00000033576	APOBEC1	73	45.070	ENSGAGG00000021745	-	64	43.750	Gopherus_agassizii
ENSRROG00000033576	APOBEC1	92	45.662	ENSGAGG00000011837	-	88	50.833	Gopherus_agassizii
ENSRROG00000033576	APOBEC1	99	65.532	ENSHGLG00000001495	APOBEC1	99	65.532	Heterocephalus_glaber_female
ENSRROG00000033576	APOBEC1	99	64.681	ENSHGLG00100002187	APOBEC1	99	64.681	Heterocephalus_glaber_male
ENSRROG00000033576	APOBEC1	96	64.130	ENSSTOG00000021971	APOBEC1	100	78.571	Ictidomys_tridecemlineatus
ENSRROG00000033576	APOBEC1	97	74.672	ENSJJAG00000022108	Apobec1	100	74.672	Jaculus_jaculus
ENSRROG00000033576	APOBEC1	99	76.842	ENSLAFG00000030837	APOBEC1	100	77.130	Loxodonta_africana
ENSRROG00000033576	APOBEC1	100	96.610	ENSMFAG00000000277	APOBEC1	100	96.610	Macaca_fascicularis
ENSRROG00000033576	APOBEC1	100	96.186	ENSMNEG00000029670	APOBEC1	100	96.186	Macaca_nemestrina
ENSRROG00000033576	APOBEC1	100	96.610	ENSMLEG00000036301	APOBEC1	100	96.610	Mandrillus_leucophaeus
ENSRROG00000033576	APOBEC1	95	71.823	ENSMAUG00000022167	Apobec1	97	71.296	Mesocricetus_auratus
ENSRROG00000033576	APOBEC1	100	83.898	ENSMICG00000043645	APOBEC1	100	83.898	Microcebus_murinus
ENSRROG00000033576	APOBEC1	100	67.797	ENSMODG00000018004	APOBEC1	100	67.797	Monodelphis_domestica
ENSRROG00000033576	APOBEC1	97	70.175	ENSMUSG00000040613	Apobec1	99	70.175	Mus_musculus
ENSRROG00000033576	APOBEC1	97	68.860	MGP_PahariEiJ_G0022580	-	99	68.860	Mus_pahari
ENSRROG00000033576	APOBEC1	97	70.175	MGP_SPRETEiJ_G0029857	Apobec1	99	70.175	Mus_spretus
ENSRROG00000033576	APOBEC1	100	77.542	ENSMPUG00000017532	APOBEC1	100	77.542	Mustela_putorius_furo
ENSRROG00000033576	APOBEC1	97	71.616	ENSNGAG00000022607	Apobec1	100	71.616	Nannospalax_galili
ENSRROG00000033576	APOBEC1	100	94.492	ENSNLEG00000005342	APOBEC1	100	94.492	Nomascus_leucogenys
ENSRROG00000033576	APOBEC1	100	65.678	ENSMEUG00000013406	APOBEC1	100	65.678	Notamacropus_eugenii
ENSRROG00000033576	APOBEC1	77	63.536	ENSOPRG00000009508	-	100	63.536	Ochotona_princeps
ENSRROG00000033576	APOBEC1	100	76.271	ENSOCUG00000025736	APOBEC1	88	76.271	Oryctolagus_cuniculus
ENSRROG00000033576	APOBEC1	98	80.519	ENSOGAG00000026415	APOBEC1	98	80.519	Otolemur_garnettii
ENSRROG00000033576	APOBEC1	99	74.211	ENSOARG00000002072	APOBEC1	99	72.458	Ovis_aries
ENSRROG00000033576	APOBEC1	98	86.147	ENSPPAG00000027657	APOBEC1	98	86.147	Pan_paniscus
ENSRROG00000033576	APOBEC1	100	81.356	ENSPPRG00000012182	APOBEC1	100	81.356	Panthera_pardus
ENSRROG00000033576	APOBEC1	100	81.356	ENSPTIG00000020280	APOBEC1	100	81.356	Panthera_tigris_altaica
ENSRROG00000033576	APOBEC1	100	93.220	ENSPTRG00000004614	APOBEC1	100	93.220	Pan_troglodytes
ENSRROG00000033576	APOBEC1	100	97.458	ENSPANG00000021027	APOBEC1	100	97.458	Papio_anubis
ENSRROG00000033576	APOBEC1	99	41.949	ENSPSIG00000012568	-	99	41.949	Pelodiscus_sinensis
ENSRROG00000033576	APOBEC1	71	47.706	ENSPSIG00000012791	-	75	47.706	Pelodiscus_sinensis
ENSRROG00000033576	APOBEC1	97	68.559	ENSPEMG00000023841	Apobec1	100	68.559	Peromyscus_maniculatus_bairdii
ENSRROG00000033576	APOBEC1	100	68.644	ENSPCIG00000023973	APOBEC1	100	68.644	Phascolarctos_cinereus
ENSRROG00000033576	APOBEC1	100	92.797	ENSPPYG00000004228	APOBEC1	95	92.797	Pongo_abelii
ENSRROG00000033576	APOBEC1	79	79.679	ENSPCAG00000008733	APOBEC1	100	79.679	Procavia_capensis
ENSRROG00000033576	APOBEC1	99	84.737	ENSPCOG00000013957	APOBEC1	100	81.780	Propithecus_coquereli
ENSRROG00000033576	APOBEC1	100	63.983	ENSPVAG00000010709	APOBEC1	100	63.983	Pteropus_vampyrus
ENSRROG00000033576	APOBEC1	97	68.421	ENSRNOG00000015411	Apobec1	99	68.421	Rattus_norvegicus
ENSRROG00000033576	APOBEC1	100	99.576	ENSRBIG00000031161	APOBEC1	100	99.576	Rhinopithecus_bieti
ENSRROG00000033576	APOBEC1	74	93.662	ENSSBOG00000030587	APOBEC1	98	92.486	Saimiri_boliviensis_boliviensis
ENSRROG00000033576	APOBEC1	99	68.947	ENSSHAG00000008925	APOBEC1	99	69.604	Sarcophilus_harrisii
ENSRROG00000033576	APOBEC1	73	65.698	ENSSARG00000000032	-	100	65.698	Sorex_araneus
ENSRROG00000033576	APOBEC1	56	69.466	ENSSARG00000011972	-	99	69.466	Sorex_araneus
ENSRROG00000033576	APOBEC1	86	40.865	ENSSPUG00000009044	-	79	40.865	Sphenodon_punctatus
ENSRROG00000033576	APOBEC1	99	78.947	ENSSSCG00000000668	APOBEC1	100	77.542	Sus_scrofa
ENSRROG00000033576	APOBEC1	58	54.054	ENSTGUG00000013118	-	99	49.655	Taeniopygia_guttata
ENSRROG00000033576	APOBEC1	99	75.789	ENSTBEG00000010043	APOBEC1	94	76.018	Tupaia_belangeri
ENSRROG00000033576	APOBEC1	79	74.866	ENSTTRG00000014015	APOBEC1	100	74.866	Tursiops_truncatus
ENSRROG00000033576	APOBEC1	98	80.851	ENSUAMG00000011636	APOBEC1	95	80.087	Ursus_americanus
ENSRROG00000033576	APOBEC1	99	80.526	ENSUMAG00000016552	APOBEC1	95	80.087	Ursus_maritimus
ENSRROG00000033576	APOBEC1	100	75.424	ENSVPAG00000001343	APOBEC1	100	75.424	Vicugna_pacos
ENSRROG00000033576	APOBEC1	99	82.105	ENSVVUG00000010522	APOBEC1	100	80.932	Vulpes_vulpes