EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSRROG00000033792 (Gene tree)
Gene ID
104675214
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Rhinopithecus_roxellana
Status
putative
Strand
Minus strand
Length
53417 bases
Position
chrKN298115.1:2224662-2278078
Accession
104675214
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRROP00000019605CPSF73-100_CPF11718.81.5e-5411
ENSRROP00000019602CPSF73-100_CPF11718.81.6e-5411
ENSRROP00000019605Beta-CaspPF10996.87.8e-3411
ENSRROP00000019602Beta-CaspPF10996.87.9e-3411
ENSRROP00000019605Lactamase_BPF00753.271.8e-1811
ENSRROP00000019602Lactamase_BPF00753.271.8e-1811
ENSRROP00000019605RMMBLPF07521.122.1e-2111
ENSRROP00000019602RMMBLPF07521.122.1e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRROT00000043775CPSF3-2012697XM_010379686ENSRROP00000019602684 (aa)XP_010377988A0A2K6PSV5
ENSRROT00000043778CPSF3-2022043XM_010379687ENSRROP00000019605680 (aa)XP_010377989A0A2K6PSU7
Gene Model
Click here to download ENSRROG00000033792's gene model file
Pathways
Pathway IDPathway NameSource
rro03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000033792's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRROG00000033792CPSF310099.854ENSG00000119203CPSF3100100.000Homo_sapiens
ENSRROG00000033792CPSF39985.420ENSAPOG00000022087cpsf39885.420Acanthochromis_polyacanthus
ENSRROG00000033792CPSF37396.994ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSRROG00000033792CPSF310099.561ENSAMEG00000008493CPSF310099.561Ailuropoda_melanoleuca
ENSRROG00000033792CPSF39282.803ENSACIG00000009846cpsf39982.803Amphilophus_citrinellus
ENSRROG00000033792CPSF39286.508ENSACIG00000023663CPSF39986.508Amphilophus_citrinellus
ENSRROG00000033792CPSF39985.420ENSAOCG00000022056cpsf39491.156Amphiprion_ocellaris
ENSRROG00000033792CPSF39987.941ENSAOCG00000010077CPSF39887.941Amphiprion_ocellaris
ENSRROG00000033792CPSF39987.941ENSAPEG00000021167CPSF39887.941Amphiprion_percula
ENSRROG00000033792CPSF39985.567ENSAPEG00000019526cpsf39786.728Amphiprion_percula
ENSRROG00000033792CPSF39983.235ENSATEG00000014525CPSF39883.235Anabas_testudineus
ENSRROG00000033792CPSF39985.420ENSATEG00000003959cpsf39885.420Anabas_testudineus
ENSRROG00000033792CPSF39995.387ENSAPLG00000006941CPSF39895.387Anas_platyrhynchos
ENSRROG00000033792CPSF39393.071ENSACAG00000001759CPSF39993.071Anolis_carolinensis
ENSRROG00000033792CPSF310093.275ENSANAG00000031254CPSF310093.275Aotus_nancymaae
ENSRROG00000033792CPSF39286.349ENSACLG00000018846CPSF39986.349Astatotilapia_calliptera
ENSRROG00000033792CPSF39885.714ENSACLG00000014484cpsf39985.714Astatotilapia_calliptera
ENSRROG00000033792CPSF39988.235ENSAMXG00000004786cpsf39888.235Astyanax_mexicanus
ENSRROG00000033792CPSF310099.708ENSBTAG00000019735CPSF310099.708Bos_taurus
ENSRROG00000033792CPSF39159.213WBGene00013460cpsf-38959.213Caenorhabditis_elegans
ENSRROG00000033792CPSF310099.561ENSCJAG00000006276CPSF310099.561Callithrix_jacchus
ENSRROG00000033792CPSF310099.561ENSCAFG00000003375CPSF39599.561Canis_familiaris
ENSRROG00000033792CPSF390100.000ENSCAFG00020026799CPSF3100100.000Canis_lupus_dingo
ENSRROG00000033792CPSF310099.708ENSCHIG00000013973CPSF310099.708Capra_hircus
ENSRROG00000033792CPSF310099.854ENSTSYG00000002967CPSF310099.854Carlito_syrichta
ENSRROG00000033792CPSF39897.901ENSCAPG00000013851CPSF310097.901Cavia_aperea
ENSRROG00000033792CPSF310097.953ENSCPOG00000011299CPSF310097.953Cavia_porcellus
ENSRROG00000033792CPSF310099.708ENSCCAG00000036730CPSF310099.708Cebus_capucinus
ENSRROG00000033792CPSF310097.226ENSCATG00000014770CPSF399100.000Cercocebus_atys
ENSRROG00000033792CPSF310097.515ENSCLAG00000002727CPSF310097.515Chinchilla_lanigera
ENSRROG00000033792CPSF310092.105ENSCSAG00000007125CPSF310092.105Chlorocebus_sabaeus
ENSRROG00000033792CPSF387100.000ENSCHOG00000000180CPSF38572.281Choloepus_hoffmanni
ENSRROG00000033792CPSF39995.601ENSCPBG00000014074CPSF39995.601Chrysemys_picta_bellii
ENSRROG00000033792CPSF39968.390ENSCING00000007214-9868.129Ciona_intestinalis
ENSRROG00000033792CPSF310086.696ENSCANG00000034435CPSF310086.696Colobus_angolensis_palliatus
ENSRROG00000033792CPSF310098.977ENSCGRG00001013134Cpsf310098.977Cricetulus_griseus_chok1gshd
ENSRROG00000033792CPSF310098.977ENSCGRG00000018319Cpsf310098.977Cricetulus_griseus_crigri
ENSRROG00000033792CPSF39986.784ENSCSEG00000002021CPSF39986.553Cynoglossus_semilaevis
ENSRROG00000033792CPSF39988.235ENSCVAG00000015067CPSF39888.235Cyprinodon_variegatus
ENSRROG00000033792CPSF39988.971ENSDARG00000027649cpsf39888.971Danio_rerio
ENSRROG00000033792CPSF310097.810ENSDNOG00000008940CPSF39597.810Dasypus_novemcinctus
ENSRROG00000033792CPSF39599.232ENSDORG00000014263Cpsf310099.232Dipodomys_ordii
ENSRROG00000033792CPSF39967.305FBgn0261065Cpsf739966.618Drosophila_melanogaster
ENSRROG00000033792CPSF39585.714ENSETEG00000003893CPSF310085.714Echinops_telfairi
ENSRROG00000033792CPSF39978.653ENSEBUG00000009018cpsf39878.797Eptatretus_burgeri
ENSRROG00000033792CPSF310099.561ENSEASG00005003970CPSF310099.561Equus_asinus_asinus
ENSRROG00000033792CPSF310099.561ENSECAG00000019911CPSF310099.561Equus_caballus
ENSRROG00000033792CPSF310084.064ENSEEUG00000015422CPSF310084.064Erinaceus_europaeus
ENSRROG00000033792CPSF39988.088ENSELUG00000013775cpsf39888.088Esox_lucius
ENSRROG00000033792CPSF310099.708ENSFCAG00000007852CPSF310099.708Felis_catus
ENSRROG00000033792CPSF39595.363ENSFALG00000006572CPSF310095.363Ficedula_albicollis
ENSRROG00000033792CPSF39997.361ENSFDAG00000006317CPSF39997.361Fukomys_damarensis
ENSRROG00000033792CPSF36068.780ENSFHEG00000012186CPSF39968.780Fundulus_heteroclitus
ENSRROG00000033792CPSF39985.125ENSFHEG00000014774cpsf39885.125Fundulus_heteroclitus
ENSRROG00000033792CPSF39986.618ENSGMOG00000003157cpsf39886.618Gadus_morhua
ENSRROG00000033792CPSF39995.154ENSGALG00000016424CPSF39995.154Gallus_gallus
ENSRROG00000033792CPSF39282.830ENSGAFG00000019449cpsf39982.830Gambusia_affinis
ENSRROG00000033792CPSF39988.071ENSGAFG00000008016CPSF39888.071Gambusia_affinis
ENSRROG00000033792CPSF36993.576ENSGAGG00000025583CPSF39393.576Gopherus_agassizii
ENSRROG00000033792CPSF310097.568ENSGGOG00000001757CPSF3100100.000Gorilla_gorilla
ENSRROG00000033792CPSF36081.481ENSHBUG00000014332CPSF39981.481Haplochromis_burtoni
ENSRROG00000033792CPSF39985.609ENSHBUG00000001188cpsf39985.609Haplochromis_burtoni
ENSRROG00000033792CPSF310096.930ENSHGLG00000000666CPSF39996.930Heterocephalus_glaber_female
ENSRROG00000033792CPSF310096.930ENSHGLG00100007765CPSF39996.930Heterocephalus_glaber_male
ENSRROG00000033792CPSF39986.324ENSHCOG00000015957CPSF39786.324Hippocampus_comes
ENSRROG00000033792CPSF39984.897ENSHCOG00000007251cpsf39984.897Hippocampus_comes
ENSRROG00000033792CPSF39987.059ENSIPUG00000023488cpsf39887.059Ictalurus_punctatus
ENSRROG00000033792CPSF310098.977ENSSTOG00000004476CPSF310098.977Ictidomys_tridecemlineatus
ENSRROG00000033792CPSF310097.807ENSJJAG00000023415Cpsf310097.807Jaculus_jaculus
ENSRROG00000033792CPSF39987.647ENSKMAG00000007317CPSF39887.647Kryptolebias_marmoratus
ENSRROG00000033792CPSF39984.831ENSKMAG00000002806cpsf39884.831Kryptolebias_marmoratus
ENSRROG00000033792CPSF39979.118ENSLBEG00000020569cpsf39479.118Labrus_bergylta
ENSRROG00000033792CPSF35579.625ENSLBEG00000015018-9979.625Labrus_bergylta
ENSRROG00000033792CPSF39589.043ENSLBEG00000013492CPSF39889.043Labrus_bergylta
ENSRROG00000033792CPSF39983.800ENSLACG00000008308CPSF39883.800Latimeria_chalumnae
ENSRROG00000033792CPSF39989.280ENSLOCG00000016823cpsf39889.280Lepisosteus_oculatus
ENSRROG00000033792CPSF39899.100ENSLAFG00000009467CPSF310097.794Loxodonta_africana
ENSRROG00000033792CPSF310099.854ENSMFAG00000001339CPSF310099.854Macaca_fascicularis
ENSRROG00000033792CPSF39599.845ENSMMUG00000018038CPSF310099.845Macaca_mulatta
ENSRROG00000033792CPSF310087.135ENSMNEG00000039447CPSF310087.135Macaca_nemestrina
ENSRROG00000033792CPSF3100100.000ENSMLEG00000026825CPSF3100100.000Mandrillus_leucophaeus
ENSRROG00000033792CPSF39985.714ENSMAMG00000003076cpsf39885.714Mastacembelus_armatus
ENSRROG00000033792CPSF39285.285ENSMAMG00000008835CPSF39985.285Mastacembelus_armatus
ENSRROG00000033792CPSF39988.529ENSMZEG00005006258CPSF39888.529Maylandia_zebra
ENSRROG00000033792CPSF39985.609ENSMZEG00005014358cpsf39985.609Maylandia_zebra
ENSRROG00000033792CPSF39895.202ENSMGAG00000013995CPSF310095.202Meleagris_gallopavo
ENSRROG00000033792CPSF35597.340ENSMAUG00000000166Cpsf310097.340Mesocricetus_auratus
ENSRROG00000033792CPSF310094.006ENSMICG00000002363CPSF310094.006Microcebus_murinus
ENSRROG00000033792CPSF310094.298ENSMOCG00000020067Cpsf310094.298Microtus_ochrogaster
ENSRROG00000033792CPSF38071.779ENSMMOG00000011923CPSF38477.857Mola_mola
ENSRROG00000033792CPSF39582.326ENSMMOG00000018212CPSF39882.326Mola_mola
ENSRROG00000033792CPSF310096.093ENSMODG00000014703CPSF310096.093Monodelphis_domestica
ENSRROG00000033792CPSF39986.050ENSMALG00000016416cpsf39986.050Monopterus_albus
ENSRROG00000033792CPSF39383.438ENSMALG00000011474CPSF39983.438Monopterus_albus
ENSRROG00000033792CPSF310098.684MGP_CAROLIEiJ_G0017640Cpsf310098.684Mus_caroli
ENSRROG00000033792CPSF310098.684ENSMUSG00000054309Cpsf310098.684Mus_musculus
ENSRROG00000033792CPSF310098.538MGP_PahariEiJ_G0029397Cpsf310098.538Mus_pahari
ENSRROG00000033792CPSF310098.684MGP_SPRETEiJ_G0018481Cpsf310098.684Mus_spretus
ENSRROG00000033792CPSF310098.830ENSMPUG00000013213CPSF310098.830Mustela_putorius_furo
ENSRROG00000033792CPSF310098.540ENSMLUG00000010636CPSF310098.540Myotis_lucifugus
ENSRROG00000033792CPSF310098.830ENSNGAG00000019836Cpsf310098.830Nannospalax_galili
ENSRROG00000033792CPSF39985.169ENSNBRG00000004770cpsf39985.169Neolamprologus_brichardi
ENSRROG00000033792CPSF39286.349ENSNBRG00000010525CPSF39986.349Neolamprologus_brichardi
ENSRROG00000033792CPSF310099.854ENSNLEG00000013359CPSF310099.854Nomascus_leucogenys
ENSRROG00000033792CPSF310065.497ENSMEUG00000013117-10065.497Notamacropus_eugenii
ENSRROG00000033792CPSF310089.766ENSOPRG00000008902CPSF310089.766Ochotona_princeps
ENSRROG00000033792CPSF310097.076ENSODEG00000003129CPSF310097.076Octodon_degus
ENSRROG00000033792CPSF39985.756ENSONIG00000018812cpsf39985.756Oreochromis_niloticus
ENSRROG00000033792CPSF38396.454ENSOANG00000008577CPSF310096.454Ornithorhynchus_anatinus
ENSRROG00000033792CPSF310099.123ENSOCUG00000003728CPSF310099.123Oryctolagus_cuniculus
ENSRROG00000033792CPSF39983.554ENSORLG00000018854cpsf39983.554Oryzias_latipes
ENSRROG00000033792CPSF39983.554ENSORLG00020013331cpsf39983.554Oryzias_latipes_hni
ENSRROG00000033792CPSF39983.554ENSORLG00015011017cpsf39983.554Oryzias_latipes_hsok
ENSRROG00000033792CPSF39983.700ENSOMEG00000010647cpsf39483.700Oryzias_melastigma
ENSRROG00000033792CPSF310089.766ENSOGAG00000001680CPSF310089.766Otolemur_garnettii
ENSRROG00000033792CPSF310099.708ENSOARG00000015073CPSF310099.708Ovis_aries
ENSRROG00000033792CPSF3100100.000ENSPPAG00000042457CPSF3100100.000Pan_paniscus
ENSRROG00000033792CPSF310099.415ENSPPRG00000016790CPSF310099.415Panthera_pardus
ENSRROG00000033792CPSF39999.412ENSPTIG00000003920CPSF310099.370Panthera_tigris_altaica
ENSRROG00000033792CPSF3100100.000ENSPTRG00000011638CPSF3100100.000Pan_troglodytes
ENSRROG00000033792CPSF310099.708ENSPANG00000016798CPSF310099.708Papio_anubis
ENSRROG00000033792CPSF39989.559ENSPKIG00000023646cpsf39989.302Paramormyrops_kingsleyae
ENSRROG00000033792CPSF39994.478ENSPSIG00000016144CPSF310093.851Pelodiscus_sinensis
ENSRROG00000033792CPSF36079.259ENSPMGG00000015311CPSF39979.259Periophthalmus_magnuspinnatus
ENSRROG00000033792CPSF38385.340ENSPMGG00000006141-9985.340Periophthalmus_magnuspinnatus
ENSRROG00000033792CPSF310098.392ENSPEMG00000017668Cpsf310098.392Peromyscus_maniculatus_bairdii
ENSRROG00000033792CPSF37890.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSRROG00000033792CPSF39996.875ENSPCIG00000009823CPSF39996.875Phascolarctos_cinereus
ENSRROG00000033792CPSF39984.751ENSPFOG00000015922cpsf39984.751Poecilia_formosa
ENSRROG00000033792CPSF39987.776ENSPFOG00000010418-9887.776Poecilia_formosa
ENSRROG00000033792CPSF39984.751ENSPLAG00000000882cpsf39984.751Poecilia_latipinna
ENSRROG00000033792CPSF35980.693ENSPLAG00000021300-9980.693Poecilia_latipinna
ENSRROG00000033792CPSF39984.897ENSPMEG00000018309cpsf39984.897Poecilia_mexicana
ENSRROG00000033792CPSF39982.474ENSPREG00000004482CPSF39882.474Poecilia_reticulata
ENSRROG00000033792CPSF39282.671ENSPREG00000014875cpsf39982.671Poecilia_reticulata
ENSRROG00000033792CPSF310095.468ENSPPYG00000012666CPSF310095.468Pongo_abelii
ENSRROG00000033792CPSF39563.902ENSPCAG00000015042CPSF310063.902Procavia_capensis
ENSRROG00000033792CPSF38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSRROG00000033792CPSF39999.560ENSPVAG00000005324CPSF39999.560Pteropus_vampyrus
ENSRROG00000033792CPSF39985.609ENSPNYG00000004405cpsf39985.609Pundamilia_nyererei
ENSRROG00000033792CPSF38091.529ENSPNYG00000021047CPSF39191.529Pundamilia_nyererei
ENSRROG00000033792CPSF39987.647ENSPNAG00000023060cpsf39887.647Pygocentrus_nattereri
ENSRROG00000033792CPSF39998.680ENSRNOG00000052418Cpsf39998.680Rattus_norvegicus
ENSRROG00000033792CPSF310094.006ENSRBIG00000041615CPSF39995.363Rhinopithecus_bieti
ENSRROG00000033792CPSF39440.726YLR277CYSH19540.805Saccharomyces_cerevisiae
ENSRROG00000033792CPSF310093.623ENSSBOG00000027263CPSF310093.623Saimiri_boliviensis_boliviensis
ENSRROG00000033792CPSF310097.807ENSSHAG00000007024CPSF310097.807Sarcophilus_harrisii
ENSRROG00000033792CPSF39989.574ENSSFOG00015002108cpsf39989.574Scleropages_formosus
ENSRROG00000033792CPSF39587.654ENSSMAG00000020534CPSF39587.654Scophthalmus_maximus
ENSRROG00000033792CPSF39988.088ENSSDUG00000018498CPSF39888.088Seriola_dumerili
ENSRROG00000033792CPSF39985.609ENSSDUG00000002828cpsf39685.609Seriola_dumerili
ENSRROG00000033792CPSF39988.088ENSSLDG00000005234CPSF39888.088Seriola_lalandi_dorsalis
ENSRROG00000033792CPSF39985.609ENSSLDG00000008469cpsf39190.847Seriola_lalandi_dorsalis
ENSRROG00000033792CPSF310081.433ENSSARG00000005186CPSF310081.433Sorex_araneus
ENSRROG00000033792CPSF39991.864ENSSPUG00000015525CPSF39891.864Sphenodon_punctatus
ENSRROG00000033792CPSF39985.567ENSSPAG00000018579cpsf39885.567Stegastes_partitus
ENSRROG00000033792CPSF39987.794ENSSPAG00000002906CPSF39887.794Stegastes_partitus
ENSRROG00000033792CPSF39999.414ENSSSCG00000020799CPSF39999.414Sus_scrofa
ENSRROG00000033792CPSF39995.448ENSTGUG00000013016CPSF39995.448Taeniopygia_guttata
ENSRROG00000033792CPSF39984.853ENSTRUG00000007030cpsf39784.853Takifugu_rubripes
ENSRROG00000033792CPSF35973.219ENSTRUG00000013905CPSF39973.219Takifugu_rubripes
ENSRROG00000033792CPSF38593.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSRROG00000033792CPSF38898.925ENSTTRG00000000861CPSF38898.925Tursiops_truncatus
ENSRROG00000033792CPSF39996.481ENSUAMG00000007535CPSF39896.481Ursus_americanus
ENSRROG00000033792CPSF39599.536ENSUMAG00000003676CPSF310099.536Ursus_maritimus
ENSRROG00000033792CPSF39395.899ENSVPAG00000008041CPSF310095.899Vicugna_pacos
ENSRROG00000033792CPSF310099.561ENSVVUG00000002194CPSF310099.561Vulpes_vulpes
ENSRROG00000033792CPSF39990.162ENSXETG00000008263cpsf39890.162Xenopus_tropicalis
ENSRROG00000033792CPSF39985.044ENSXCOG00000019695cpsf39985.044Xiphophorus_couchianus
ENSRROG00000033792CPSF35579.245ENSXCOG00000000957-8779.245Xiphophorus_couchianus
ENSRROG00000033792CPSF39987.923ENSXMAG00000027291CPSF39887.923Xiphophorus_maculatus
ENSRROG00000033792CPSF39984.751ENSXMAG00000009784cpsf39984.751Xiphophorus_maculatus

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