EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000033974 (Gene tree)
Gene ID: 104672109
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 7038 bases
Position: chrKN297482.1:14915-21952
Accession: 104672109
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000020038	SRP19	PF01922.17	9.6e-26	1	1
ENSRROP00000020043	SRP19	PF01922.17	2.5e-14	1	2
ENSRROP00000020043	SRP19	PF01922.17	2.5e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000044218	-	922	XM_010375813	ENSRROP00000020043	120 (aa)	XP_010374115	A0A2K6PU61
ENSRROT00000044213	-	1026	XM_010375815	ENSRROP00000020038	110 (aa)	XP_010374117	A0A2K6PU50
ENSRROT00000044221	-	918	XM_010375818	ENSRROP00000020046	78 (aa)	XP_010374120	A0A2K6PU39

Gene Model

Click here to download ENSRROG00000033974's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000033974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000033974	-	66	91.781	ENSRROG00000037316	-	92	59.350
ENSRROG00000033974	-	91	90.826	ENSRROG00000037054	-	92	90.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000033974	-	67	88.750	ENSCAFG00020008822	-	62	93.151	Canis_lupus_dingo
ENSRROG00000033974	-	100	100.000	ENSCATG00000030502	-	100	100.000	Cercocebus_atys
ENSRROG00000033974	-	93	94.595	ENSCLAG00000008943	-	93	94.595	Chinchilla_lanigera
ENSRROG00000033974	-	100	100.000	ENSCANG00000041172	-	100	100.000	Colobus_angolensis_palliatus
ENSRROG00000033974	-	61	90.411	ENSCGRG00001012009	-	66	90.411	Cricetulus_griseus_chok1gshd
ENSRROG00000033974	-	60	94.444	ENSEEUG00000009240	-	89	94.444	Erinaceus_europaeus
ENSRROG00000033974	-	93	71.552	ENSGGOG00000038737	-	93	71.552	Gorilla_gorilla
ENSRROG00000033974	-	100	99.091	ENSGGOG00000027482	SRP19	100	99.091	Gorilla_gorilla
ENSRROG00000033974	-	96	78.302	ENSHGLG00000006069	-	82	74.419	Heterocephalus_glaber_female
ENSRROG00000033974	-	96	78.302	ENSHGLG00100006563	-	82	74.419	Heterocephalus_glaber_male
ENSRROG00000033974	-	100	100.000	ENSMFAG00000040995	-	100	100.000	Macaca_fascicularis
ENSRROG00000033974	-	100	100.000	ENSMMUG00000000331	-	100	100.000	Macaca_mulatta
ENSRROG00000033974	-	100	100.000	ENSMLEG00000030461	-	100	100.000	Mandrillus_leucophaeus
ENSRROG00000033974	-	96	67.925	ENSMOCG00000010964	-	94	66.929	Microtus_ochrogaster
ENSRROG00000033974	-	100	100.000	ENSNLEG00000030884	-	100	100.000	Nomascus_leucogenys
ENSRROG00000033974	-	93	94.595	ENSODEG00000016828	-	93	94.595	Octodon_degus
ENSRROG00000033974	-	93	95.495	ENSODEG00000003165	-	93	95.495	Octodon_degus
ENSRROG00000033974	-	93	95.495	ENSODEG00000005033	-	93	95.495	Octodon_degus
ENSRROG00000033974	-	82	87.755	ENSODEG00000000221	-	89	87.755	Octodon_degus
ENSRROG00000033974	-	93	69.828	ENSPPAG00000040638	-	93	69.828	Pan_paniscus
ENSRROG00000033974	-	93	70.175	ENSPTRG00000045571	-	93	70.175	Pan_troglodytes
ENSRROG00000033974	-	93	64.865	ENSPCOG00000019414	-	91	64.865	Propithecus_coquereli
ENSRROG00000033974	-	56	95.522	ENSSHAG00000009452	-	88	94.203	Sarcophilus_harrisii
ENSRROG00000033974	-	59	74.648	ENSSPAG00000005240	-	57	74.648	Stegastes_partitus