EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000034230 (Gene tree)
Gene ID: 104666318
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 60110 bases
Position: chrKN296311.1:6115144-6175253
Accession: 104666318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000020750	ResIII	PF04851.15	9.9e-08	1	1
ENSRROP00000020732	ResIII	PF04851.15	1.3e-07	1	1
ENSRROP00000020720	ResIII	PF04851.15	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000044904	SBNO1-201	5380	XM_010368385	ENSRROP00000020720	1393 (aa)	XP_010366687	A0A2K6PW10
ENSRROT00000044916	SBNO1-202	4074	-	ENSRROP00000020732	1357 (aa)	-	A0A2K6PW31
ENSRROT00000044934	SBNO1-203	3813	-	ENSRROP00000020750	1270 (aa)	-	A0A2K6PW39

Gene Model

Click here to download ENSRROG00000034230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000034230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000034230	SBNO1	72	63.673	ENSRROG00000044671	SBNO2	69	72.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000034230	SBNO1	100	99.641	ENSG00000139697	SBNO1	100	99.641	Homo_sapiens
ENSRROG00000034230	SBNO1	83	83.214	ENSAPOG00000003196	sbno1	98	81.255	Acanthochromis_polyacanthus
ENSRROG00000034230	SBNO1	99	99.458	ENSAMEG00000015151	SBNO1	100	97.994	Ailuropoda_melanoleuca
ENSRROG00000034230	SBNO1	99	81.930	ENSACIG00000008088	sbno1	95	81.930	Amphilophus_citrinellus
ENSRROG00000034230	SBNO1	99	82.500	ENSAOCG00000014859	sbno1	94	82.500	Amphiprion_ocellaris
ENSRROG00000034230	SBNO1	99	82.500	ENSAPEG00000006069	sbno1	94	82.500	Amphiprion_percula
ENSRROG00000034230	SBNO1	99	84.838	ENSATEG00000006667	sbno1	95	84.838	Anabas_testudineus
ENSRROG00000034230	SBNO1	99	95.298	ENSAPLG00000015674	SBNO1	100	92.109	Anas_platyrhynchos
ENSRROG00000034230	SBNO1	100	93.907	ENSACAG00000015441	SBNO1	84	94.245	Anolis_carolinensis
ENSRROG00000034230	SBNO1	100	98.780	ENSANAG00000029958	-	100	98.780	Aotus_nancymaae
ENSRROG00000034230	SBNO1	99	76.194	ENSACLG00000024913	sbno1	99	76.354	Astatotilapia_calliptera
ENSRROG00000034230	SBNO1	99	86.847	ENSAMXG00000019473	sbno1	95	86.847	Astyanax_mexicanus
ENSRROG00000034230	SBNO1	99	98.732	ENSBTAG00000020505	SBNO1	99	98.132	Bos_taurus
ENSRROG00000034230	SBNO1	100	98.923	ENSCJAG00000016599	SBNO1	100	98.923	Callithrix_jacchus
ENSRROG00000034230	SBNO1	100	98.136	ENSCAFG00000007503	SBNO1	100	98.136	Canis_familiaris
ENSRROG00000034230	SBNO1	100	97.717	ENSCAFG00020015363	SBNO1	100	97.717	Canis_lupus_dingo
ENSRROG00000034230	SBNO1	99	98.732	ENSCHIG00000008382	SBNO1	99	98.732	Capra_hircus
ENSRROG00000034230	SBNO1	99	99.819	ENSTSYG00000012749	SBNO1	100	98.674	Carlito_syrichta
ENSRROG00000034230	SBNO1	97	99.277	ENSCAPG00000000384	SBNO1	100	97.521	Cavia_aperea
ENSRROG00000034230	SBNO1	99	99.277	ENSCPOG00000008109	SBNO1	99	99.277	Cavia_porcellus
ENSRROG00000034230	SBNO1	100	94.548	ENSCCAG00000035316	SBNO1	99	95.640	Cebus_capucinus
ENSRROG00000034230	SBNO1	99	100.000	ENSCATG00000008239	SBNO1	99	100.000	Cercocebus_atys
ENSRROG00000034230	SBNO1	99	99.277	ENSCLAG00000008995	SBNO1	99	99.277	Chinchilla_lanigera
ENSRROG00000034230	SBNO1	85	99.914	ENSCSAG00000002064	SBNO1	100	99.914	Chlorocebus_sabaeus
ENSRROG00000034230	SBNO1	95	98.049	ENSCHOG00000008814	SBNO1	96	94.423	Choloepus_hoffmanni
ENSRROG00000034230	SBNO1	100	94.803	ENSCPBG00000025968	SBNO1	99	92.194	Chrysemys_picta_bellii
ENSRROG00000034230	SBNO1	100	94.552	ENSCANG00000042688	-	100	94.552	Colobus_angolensis_palliatus
ENSRROG00000034230	SBNO1	100	97.953	ENSCGRG00001017470	Sbno1	100	97.953	Cricetulus_griseus_chok1gshd
ENSRROG00000034230	SBNO1	100	97.953	ENSCGRG00000004756	Sbno1	100	97.953	Cricetulus_griseus_crigri
ENSRROG00000034230	SBNO1	99	82.585	ENSCSEG00000011919	sbno1	96	82.321	Cynoglossus_semilaevis
ENSRROG00000034230	SBNO1	99	83.303	ENSCVAG00000007038	sbno1	95	83.303	Cyprinodon_variegatus
ENSRROG00000034230	SBNO1	99	86.438	ENSDARG00000099080	sbno1	95	86.438	Danio_rerio
ENSRROG00000034230	SBNO1	100	96.857	ENSDNOG00000017147	SBNO1	98	97.739	Dasypus_novemcinctus
ENSRROG00000034230	SBNO1	100	84.604	ENSDORG00000015261	Sbno1	100	84.604	Dipodomys_ordii
ENSRROG00000034230	SBNO1	92	100.000	ENSETEG00000005620	SBNO1	88	98.582	Echinops_telfairi
ENSRROG00000034230	SBNO1	72	86.802	ENSEBUG00000013823	sbno1	85	86.802	Eptatretus_burgeri
ENSRROG00000034230	SBNO1	54	96.053	ENSEASG00005012595	-	92	98.368	Equus_asinus_asinus
ENSRROG00000034230	SBNO1	100	98.492	ENSECAG00000006127	SBNO1	100	98.492	Equus_caballus
ENSRROG00000034230	SBNO1	84	98.352	ENSEEUG00000003793	SBNO1	83	98.352	Erinaceus_europaeus
ENSRROG00000034230	SBNO1	99	86.847	ENSELUG00000002886	sbno1	95	86.847	Esox_lucius
ENSRROG00000034230	SBNO1	99	99.457	ENSFCAG00000015331	SBNO1	99	98.420	Felis_catus
ENSRROG00000034230	SBNO1	99	95.479	ENSFALG00000009273	SBNO1	100	92.181	Ficedula_albicollis
ENSRROG00000034230	SBNO1	99	95.402	ENSFDAG00000014232	SBNO1	99	95.402	Fukomys_damarensis
ENSRROG00000034230	SBNO1	99	83.483	ENSFHEG00000007360	sbno1	95	83.483	Fundulus_heteroclitus
ENSRROG00000034230	SBNO1	96	84.587	ENSGMOG00000018229	sbno1	94	84.587	Gadus_morhua
ENSRROG00000034230	SBNO1	87	96.701	ENSGALG00000003392	SBNO1	99	92.289	Gallus_gallus
ENSRROG00000034230	SBNO1	99	83.662	ENSGAFG00000003960	sbno1	95	83.662	Gambusia_affinis
ENSRROG00000034230	SBNO1	96	84.489	ENSGACG00000015633	sbno1	95	84.489	Gasterosteus_aculeatus
ENSRROG00000034230	SBNO1	100	94.982	ENSGAGG00000001065	SBNO1	100	91.392	Gopherus_agassizii
ENSRROG00000034230	SBNO1	100	99.558	ENSGGOG00000015000	SBNO1	100	99.558	Gorilla_gorilla
ENSRROG00000034230	SBNO1	99	70.373	ENSHBUG00000011910	sbno1	99	70.554	Haplochromis_burtoni
ENSRROG00000034230	SBNO1	99	99.277	ENSHGLG00000014165	-	100	97.200	Heterocephalus_glaber_female
ENSRROG00000034230	SBNO1	93	84.676	ENSHCOG00000003246	sbno1	95	77.492	Hippocampus_comes
ENSRROG00000034230	SBNO1	99	85.791	ENSIPUG00000015830	Sbno1	93	88.978	Ictalurus_punctatus
ENSRROG00000034230	SBNO1	100	98.583	ENSSTOG00000023221	SBNO1	100	98.583	Ictidomys_tridecemlineatus
ENSRROG00000034230	SBNO1	100	98.399	ENSJJAG00000001741	Sbno1	100	97.559	Jaculus_jaculus
ENSRROG00000034230	SBNO1	99	83.755	ENSKMAG00000009696	sbno1	95	84.211	Kryptolebias_marmoratus
ENSRROG00000034230	SBNO1	99	85.099	ENSLBEG00000007623	sbno1	95	85.099	Labrus_bergylta
ENSRROG00000034230	SBNO1	99	80.929	ENSLACG00000017227	SBNO1	99	90.625	Latimeria_chalumnae
ENSRROG00000034230	SBNO1	99	88.849	ENSLOCG00000005725	sbno1	95	88.849	Lepisosteus_oculatus
ENSRROG00000034230	SBNO1	99	98.734	ENSLAFG00000002135	SBNO1	100	96.985	Loxodonta_africana
ENSRROG00000034230	SBNO1	100	99.785	ENSMFAG00000031429	SBNO1	100	99.785	Macaca_fascicularis
ENSRROG00000034230	SBNO1	100	99.785	ENSMMUG00000011496	SBNO1	100	99.785	Macaca_mulatta
ENSRROG00000034230	SBNO1	99	100.000	ENSMLEG00000033260	SBNO1	99	100.000	Mandrillus_leucophaeus
ENSRROG00000034230	SBNO1	99	84.838	ENSMAMG00000005473	sbno1	95	84.838	Mastacembelus_armatus
ENSRROG00000034230	SBNO1	99	95.660	ENSMGAG00000003274	SBNO1	100	92.253	Meleagris_gallopavo
ENSRROG00000034230	SBNO1	52	97.428	ENSMAUG00000004834	-	100	96.983	Mesocricetus_auratus
ENSRROG00000034230	SBNO1	100	97.128	ENSMICG00000006573	-	100	97.128	Microcebus_murinus
ENSRROG00000034230	SBNO1	100	97.795	ENSMOCG00000009390	Sbno1	100	97.795	Microtus_ochrogaster
ENSRROG00000034230	SBNO1	99	83.571	ENSMMOG00000008691	sbno1	94	83.571	Mola_mola
ENSRROG00000034230	SBNO1	99	97.464	ENSMODG00000012470	SBNO1	98	94.899	Monodelphis_domestica
ENSRROG00000034230	SBNO1	99	82.406	ENSMALG00000001056	sbno1	95	82.406	Monopterus_albus
ENSRROG00000034230	SBNO1	99	99.457	MGP_CAROLIEiJ_G0027749	Sbno1	100	97.285	Mus_caroli
ENSRROG00000034230	SBNO1	99	99.457	ENSMUSG00000038095	Sbno1	100	97.285	Mus_musculus
ENSRROG00000034230	SBNO1	99	98.743	MGP_PahariEiJ_G0024329	Sbno1	100	96.983	Mus_pahari
ENSRROG00000034230	SBNO1	99	99.457	MGP_SPRETEiJ_G0028747	Sbno1	100	97.285	Mus_spretus
ENSRROG00000034230	SBNO1	99	99.458	ENSMPUG00000001658	SBNO1	100	98.277	Mustela_putorius_furo
ENSRROG00000034230	SBNO1	100	97.775	ENSMLUG00000017159	SBNO1	100	97.775	Myotis_lucifugus
ENSRROG00000034230	SBNO1	99	99.458	ENSNGAG00000012620	Sbno1	100	98.277	Nannospalax_galili
ENSRROG00000034230	SBNO1	99	76.285	ENSNBRG00000019189	sbno1	99	76.445	Neolamprologus_brichardi
ENSRROG00000034230	SBNO1	100	95.873	ENSNLEG00000001502	SBNO1	100	95.873	Nomascus_leucogenys
ENSRROG00000034230	SBNO1	60	96.774	ENSMEUG00000008768	-	93	89.873	Notamacropus_eugenii
ENSRROG00000034230	SBNO1	99	97.473	ENSOPRG00000011054	SBNO1	100	94.409	Ochotona_princeps
ENSRROG00000034230	SBNO1	99	99.277	ENSODEG00000009997	SBNO1	99	99.277	Octodon_degus
ENSRROG00000034230	SBNO1	99	83.394	ENSONIG00000015348	sbno1	95	83.394	Oreochromis_niloticus
ENSRROG00000034230	SBNO1	98	96.234	ENSOCUG00000002441	SBNO1	95	96.207	Oryctolagus_cuniculus
ENSRROG00000034230	SBNO1	99	82.671	ENSORLG00000001593	sbno1	95	82.671	Oryzias_latipes
ENSRROG00000034230	SBNO1	99	82.671	ENSORLG00020015216	sbno1	95	82.671	Oryzias_latipes_hni
ENSRROG00000034230	SBNO1	99	82.852	ENSORLG00015002726	sbno1	95	82.852	Oryzias_latipes_hsok
ENSRROG00000034230	SBNO1	99	83.122	ENSOMEG00000019313	sbno1	99	75.462	Oryzias_melastigma
ENSRROG00000034230	SBNO1	52	94.251	ENSOGAG00000010781	-	100	94.127	Otolemur_garnettii
ENSRROG00000034230	SBNO1	99	98.732	ENSOARG00000004404	SBNO1	99	97.704	Ovis_aries
ENSRROG00000034230	SBNO1	100	99.606	ENSPPAG00000024635	SBNO1	100	99.606	Pan_paniscus
ENSRROG00000034230	SBNO1	99	99.457	ENSPPRG00000022092	SBNO1	99	98.420	Panthera_pardus
ENSRROG00000034230	SBNO1	99	99.458	ENSPTIG00000017803	SBNO1	100	98.134	Panthera_tigris_altaica
ENSRROG00000034230	SBNO1	100	99.685	ENSPTRG00000005597	SBNO1	100	99.685	Pan_troglodytes
ENSRROG00000034230	SBNO1	100	99.853	ENSPANG00000011640	SBNO1	100	99.853	Papio_anubis
ENSRROG00000034230	SBNO1	99	86.126	ENSPKIG00000001441	sbno1	95	86.126	Paramormyrops_kingsleyae
ENSRROG00000034230	SBNO1	99	94.604	ENSPSIG00000009572	-	100	91.753	Pelodiscus_sinensis
ENSRROG00000034230	SBNO1	91	91.216	ENSPSIG00000009256	-	100	87.646	Pelodiscus_sinensis
ENSRROG00000034230	SBNO1	100	97.559	ENSPEMG00000016087	Sbno1	100	97.559	Peromyscus_maniculatus_bairdii
ENSRROG00000034230	SBNO1	99	97.101	ENSPCIG00000010985	SBNO1	99	94.698	Phascolarctos_cinereus
ENSRROG00000034230	SBNO1	99	83.662	ENSPFOG00000005069	sbno1	95	83.662	Poecilia_formosa
ENSRROG00000034230	SBNO1	99	83.662	ENSPLAG00000015015	sbno1	95	83.662	Poecilia_latipinna
ENSRROG00000034230	SBNO1	99	83.662	ENSPMEG00000021212	sbno1	95	83.662	Poecilia_mexicana
ENSRROG00000034230	SBNO1	99	83.303	ENSPREG00000017746	sbno1	95	83.303	Poecilia_reticulata
ENSRROG00000034230	SBNO1	100	99.210	ENSPPYG00000005084	SBNO1	100	99.210	Pongo_abelii
ENSRROG00000034230	SBNO1	89	92.192	ENSPCAG00000008634	SBNO1	88	92.160	Procavia_capensis
ENSRROG00000034230	SBNO1	99	99.277	ENSPCOG00000024277	SBNO1	99	99.273	Propithecus_coquereli
ENSRROG00000034230	SBNO1	92	99.008	ENSPVAG00000015304	SBNO1	87	99.008	Pteropus_vampyrus
ENSRROG00000034230	SBNO1	99	83.394	ENSPNYG00000004291	sbno1	95	83.394	Pundamilia_nyererei
ENSRROG00000034230	SBNO1	99	87.410	ENSPNAG00000015622	sbno1	95	87.410	Pygocentrus_nattereri
ENSRROG00000034230	SBNO1	99	99.457	ENSRNOG00000001064	Sbno1	99	99.457	Rattus_norvegicus
ENSRROG00000034230	SBNO1	97	93.202	ENSSBOG00000015422	SBNO1	100	93.750	Saimiri_boliviensis_boliviensis
ENSRROG00000034230	SBNO1	99	86.126	ENSSFOG00015019025	sbno1	95	86.126	Scleropages_formosus
ENSRROG00000034230	SBNO1	99	82.944	ENSSMAG00000013640	sbno1	95	82.944	Scophthalmus_maximus
ENSRROG00000034230	SBNO1	99	84.477	ENSSDUG00000023480	sbno1	95	84.477	Seriola_dumerili
ENSRROG00000034230	SBNO1	99	84.477	ENSSLDG00000007928	sbno1	95	84.477	Seriola_lalandi_dorsalis
ENSRROG00000034230	SBNO1	91	97.865	ENSSARG00000002594	SBNO1	89	98.220	Sorex_araneus
ENSRROG00000034230	SBNO1	99	93.874	ENSSPUG00000012640	SBNO1	100	91.532	Sphenodon_punctatus
ENSRROG00000034230	SBNO1	99	82.944	ENSSPAG00000016244	sbno1	95	82.944	Stegastes_partitus
ENSRROG00000034230	SBNO1	99	99.458	ENSSSCG00000009776	SBNO1	100	98.233	Sus_scrofa
ENSRROG00000034230	SBNO1	99	95.660	ENSTGUG00000005380	SBNO1	100	92.109	Taeniopygia_guttata
ENSRROG00000034230	SBNO1	99	84.672	ENSTRUG00000018490	sbno1	95	84.672	Takifugu_rubripes
ENSRROG00000034230	SBNO1	56	70.900	ENSTNIG00000013506	sbno1	99	71.623	Tetraodon_nigroviridis
ENSRROG00000034230	SBNO1	99	99.458	ENSUAMG00000019671	SBNO1	100	98.421	Ursus_americanus
ENSRROG00000034230	SBNO1	99	99.458	ENSUMAG00000004002	SBNO1	100	98.421	Ursus_maritimus
ENSRROG00000034230	SBNO1	95	93.478	ENSVPAG00000007024	SBNO1	95	93.478	Vicugna_pacos
ENSRROG00000034230	SBNO1	99	99.458	ENSVVUG00000027807	SBNO1	100	98.277	Vulpes_vulpes
ENSRROG00000034230	SBNO1	99	91.979	ENSXETG00000031930	SBNO1	95	91.979	Xenopus_tropicalis
ENSRROG00000034230	SBNO1	86	85.827	ENSXCOG00000011607	sbno1	90	85.602	Xiphophorus_couchianus
ENSRROG00000034230	SBNO1	99	83.303	ENSXMAG00000002140	sbno1	95	83.303	Xiphophorus_maculatus