EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000034534 (Gene tree)
Gene ID: 104665459
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 206397 bases
Position: chrKN294325.1:265675-472071
Accession: 104665459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000021377	R3H	PF01424.22	2.7e-11	1	1
ENSRROP00000021347	R3H	PF01424.22	3.1e-11	1	1
ENSRROP00000021354	R3H	PF01424.22	3.1e-11	1	1
ENSRROP00000021336	R3H	PF01424.22	3.2e-11	1	1
ENSRROP00000021380	R3H	PF01424.22	3.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000045525	R3HDM1-201	4767	XM_010367311	ENSRROP00000021336	1100 (aa)	XP_010365613	A0A2K6PXT9
ENSRROT00000045536	R3HDM1-202	4593	-	ENSRROP00000021347	1056 (aa)	-	A0A2K6PXU1
ENSRROT00000045565	R3HDM1-204	4215	-	ENSRROP00000021375	446 (aa)	-	A0A2K6PXX2
ENSRROT00000045567	R3HDM1-205	3905	XM_010367340	ENSRROP00000021377	972 (aa)	XP_010365642	A0A2K6PXX0
ENSRROT00000045570	R3HDM1-206	3306	-	ENSRROP00000021380	1101 (aa)	-	A0A2K6PXX6
ENSRROT00000045543	R3HDM1-203	4124	XM_010367348	ENSRROP00000021354	1045 (aa)	XP_010365650	A0A2K6PXW0
ENSRROT00000045579	R3HDM1-207	1290	-	ENSRROP00000021389	429 (aa)	-	A0A2K6PXZ4

Gene Model

Click here to download ENSRROG00000034534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000034534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000034534	R3HDM1	62	63.636	ENSRROG00000037466	ARPP21	91	51.609
ENSRROG00000034534	R3HDM1	99	49.653	ENSRROG00000022271	R3HDM2	95	56.448

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000034534	R3HDM1	100	98.818	ENSG00000048991	R3HDM1	100	99.448	Homo_sapiens
ENSRROG00000034534	R3HDM1	88	63.467	ENSAPOG00000020850	r3hdm1	90	59.656	Acanthochromis_polyacanthus
ENSRROG00000034534	R3HDM1	100	94.656	ENSAMEG00000014886	R3HDM1	100	94.837	Ailuropoda_melanoleuca
ENSRROG00000034534	R3HDM1	87	58.088	ENSAOCG00000005192	r3hdm1	93	59.656	Amphiprion_ocellaris
ENSRROG00000034534	R3HDM1	87	63.200	ENSAPEG00000016108	r3hdm1	95	63.200	Amphiprion_percula
ENSRROG00000034534	R3HDM1	87	63.441	ENSATEG00000000232	r3hdm1	95	63.441	Anabas_testudineus
ENSRROG00000034534	R3HDM1	100	78.700	ENSAPLG00000015231	R3HDM1	100	78.520	Anas_platyrhynchos
ENSRROG00000034534	R3HDM1	100	76.049	ENSACAG00000001676	R3HDM1	100	75.612	Anolis_carolinensis
ENSRROG00000034534	R3HDM1	100	98.251	ENSANAG00000035334	R3HDM1	100	98.619	Aotus_nancymaae
ENSRROG00000034534	R3HDM1	87	62.133	ENSACLG00000027282	r3hdm1	94	62.133	Astatotilapia_calliptera
ENSRROG00000034534	R3HDM1	89	78.882	ENSAMXG00000012861	R3HDM1	100	60.512	Astyanax_mexicanus
ENSRROG00000034534	R3HDM1	88	74.286	ENSAMXG00000003536	r3hdm1	82	74.204	Astyanax_mexicanus
ENSRROG00000034534	R3HDM1	100	92.358	ENSBTAG00000013302	R3HDM1	100	92.170	Bos_taurus
ENSRROG00000034534	R3HDM1	100	97.840	ENSCJAG00000011718	R3HDM1	100	98.619	Callithrix_jacchus
ENSRROG00000034534	R3HDM1	100	94.837	ENSCAFG00000005075	R3HDM1	100	95.018	Canis_familiaris
ENSRROG00000034534	R3HDM1	100	94.923	ENSCAFG00020016119	R3HDM1	100	95.104	Canis_lupus_dingo
ENSRROG00000034534	R3HDM1	100	93.659	ENSCHIG00000020851	R3HDM1	100	93.931	Capra_hircus
ENSRROG00000034534	R3HDM1	100	88.664	ENSCPOG00000012784	R3HDM1	94	94.183	Cavia_porcellus
ENSRROG00000034534	R3HDM1	100	97.636	ENSCCAG00000027199	R3HDM1	100	97.790	Cebus_capucinus
ENSRROG00000034534	R3HDM1	100	99.001	ENSCATG00000023642	R3HDM1	100	99.001	Cercocebus_atys
ENSRROG00000034534	R3HDM1	100	88.742	ENSCLAG00000007962	R3HDM1	100	89.037	Chinchilla_lanigera
ENSRROG00000034534	R3HDM1	100	96.035	ENSCSAG00000016356	R3HDM1	100	96.035	Chlorocebus_sabaeus
ENSRROG00000034534	R3HDM1	80	93.939	ENSCHOG00000013638	R3HDM1	81	94.118	Choloepus_hoffmanni
ENSRROG00000034534	R3HDM1	91	91.513	ENSCPBG00000009645	R3HDM1	100	91.513	Chrysemys_picta_bellii
ENSRROG00000034534	R3HDM1	100	99.183	ENSCANG00000034748	R3HDM1	100	99.183	Colobus_angolensis_palliatus
ENSRROG00000034534	R3HDM1	99	87.908	ENSCGRG00001012357	R3hdm1	97	88.526	Cricetulus_griseus_chok1gshd
ENSRROG00000034534	R3HDM1	99	91.083	ENSCGRG00000012080	R3hdm1	100	91.030	Cricetulus_griseus_crigri
ENSRROG00000034534	R3HDM1	81	65.246	ENSCSEG00000008944	r3hdm1	82	65.246	Cynoglossus_semilaevis
ENSRROG00000034534	R3HDM1	87	61.067	ENSCVAG00000007582	r3hdm1	91	57.389	Cyprinodon_variegatus
ENSRROG00000034534	R3HDM1	53	52.982	ENSDARG00000061081	arpp21	95	34.684	Danio_rerio
ENSRROG00000034534	R3HDM1	100	91.220	ENSDNOG00000000771	R3HDM1	100	90.631	Dasypus_novemcinctus
ENSRROG00000034534	R3HDM1	100	83.228	ENSETEG00000013606	R3HDM1	100	83.772	Echinops_telfairi
ENSRROG00000034534	R3HDM1	54	53.016	ENSEBUG00000014746	arpp21	97	42.576	Eptatretus_burgeri
ENSRROG00000034534	R3HDM1	100	97.790	ENSEASG00005007392	R3HDM1	100	94.651	Equus_asinus_asinus
ENSRROG00000034534	R3HDM1	99	97.790	ENSECAG00000019114	R3HDM1	100	94.832	Equus_caballus
ENSRROG00000034534	R3HDM1	91	86.506	ENSEEUG00000012589	R3HDM1	89	86.990	Erinaceus_europaeus
ENSRROG00000034534	R3HDM1	92	52.436	ENSELUG00000014413	r3hdm1	96	53.721	Esox_lucius
ENSRROG00000034534	R3HDM1	83	77.994	ENSELUG00000004909	R3HDM1	99	55.514	Esox_lucius
ENSRROG00000034534	R3HDM1	100	97.514	ENSFCAG00000027113	R3HDM1	100	94.475	Felis_catus
ENSRROG00000034534	R3HDM1	75	73.023	ENSFALG00000013731	R3HDM1	86	75.676	Ficedula_albicollis
ENSRROG00000034534	R3HDM1	100	87.884	ENSFDAG00000016478	R3HDM1	100	90.033	Fukomys_damarensis
ENSRROG00000034534	R3HDM1	87	57.108	ENSFHEG00000018713	r3hdm1	100	47.531	Fundulus_heteroclitus
ENSRROG00000034534	R3HDM1	60	64.565	ENSGMOG00000006042	-	74	63.913	Gadus_morhua
ENSRROG00000034534	R3HDM1	94	77.597	ENSGALG00000012246	R3HDM1	95	90.164	Gallus_gallus
ENSRROG00000034534	R3HDM1	87	61.333	ENSGAFG00000006203	r3hdm1	95	61.333	Gambusia_affinis
ENSRROG00000034534	R3HDM1	86	68.269	ENSGACG00000014925	r3hdm1	92	68.269	Gasterosteus_aculeatus
ENSRROG00000034534	R3HDM1	99	83.944	ENSGAGG00000007840	R3HDM1	100	77.738	Gopherus_agassizii
ENSRROG00000034534	R3HDM1	100	98.560	ENSGGOG00000008156	R3HDM1	100	99.448	Gorilla_gorilla
ENSRROG00000034534	R3HDM1	100	88.478	ENSHGLG00000015718	R3HDM1	100	89.701	Heterocephalus_glaber_female
ENSRROG00000034534	R3HDM1	100	88.215	ENSHGLG00100003184	-	100	89.369	Heterocephalus_glaber_male
ENSRROG00000034534	R3HDM1	100	72.075	ENSHGLG00100015374	-	100	73.272	Heterocephalus_glaber_male
ENSRROG00000034534	R3HDM1	87	59.517	ENSHCOG00000013366	r3hdm1	91	60.322	Hippocampus_comes
ENSRROG00000034534	R3HDM1	93	60.622	ENSIPUG00000013629	r3hdm1	95	69.182	Ictalurus_punctatus
ENSRROG00000034534	R3HDM1	82	73.981	ENSIPUG00000001676	R3HDM1	99	58.799	Ictalurus_punctatus
ENSRROG00000034534	R3HDM1	100	94.374	ENSSTOG00000007572	R3HDM1	100	94.374	Ictidomys_tridecemlineatus
ENSRROG00000034534	R3HDM1	96	71.157	ENSLACG00000005334	R3HDM1	94	68.953	Latimeria_chalumnae
ENSRROG00000034534	R3HDM1	100	65.988	ENSLOCG00000001641	r3hdm1	100	65.956	Lepisosteus_oculatus
ENSRROG00000034534	R3HDM1	100	90.765	ENSLAFG00000009065	R3HDM1	100	91.205	Loxodonta_africana
ENSRROG00000034534	R3HDM1	100	99.183	ENSMFAG00000030331	R3HDM1	100	99.507	Macaca_fascicularis
ENSRROG00000034534	R3HDM1	100	99.091	ENSMMUG00000009844	R3HDM1	100	99.448	Macaca_mulatta
ENSRROG00000034534	R3HDM1	100	99.001	ENSMNEG00000027793	R3HDM1	100	99.507	Macaca_nemestrina
ENSRROG00000034534	R3HDM1	100	99.280	ENSMLEG00000043189	R3HDM1	100	99.448	Mandrillus_leucophaeus
ENSRROG00000034534	R3HDM1	87	62.466	ENSMAMG00000004532	r3hdm1	92	59.623	Mastacembelus_armatus
ENSRROG00000034534	R3HDM1	87	62.133	ENSMZEG00005003157	r3hdm1	86	68.590	Maylandia_zebra
ENSRROG00000034534	R3HDM1	100	78.249	ENSMGAG00000012461	R3HDM1	100	77.798	Meleagris_gallopavo
ENSRROG00000034534	R3HDM1	100	87.544	ENSMAUG00000010315	R3hdm1	100	91.362	Mesocricetus_auratus
ENSRROG00000034534	R3HDM1	95	92.432	ENSMICG00000042655	-	100	95.856	Microcebus_murinus
ENSRROG00000034534	R3HDM1	100	93.810	ENSMICG00000005900	-	100	96.133	Microcebus_murinus
ENSRROG00000034534	R3HDM1	89	78.708	ENSMODG00000000923	R3HDM1	90	77.752	Monodelphis_domestica
ENSRROG00000034534	R3HDM1	99	58.065	ENSMALG00000009000	r3hdm1	91	58.065	Monopterus_albus
ENSRROG00000034534	R3HDM1	100	86.719	MGP_CAROLIEiJ_G0014543	R3hdm1	100	94.561	Mus_caroli
ENSRROG00000034534	R3HDM1	100	86.719	ENSMUSG00000056211	R3hdm1	100	94.561	Mus_musculus
ENSRROG00000034534	R3HDM1	100	86.631	MGP_PahariEiJ_G0027779	R3hdm1	100	94.561	Mus_pahari
ENSRROG00000034534	R3HDM1	100	86.895	MGP_SPRETEiJ_G0015350	R3hdm1	100	94.561	Mus_spretus
ENSRROG00000034534	R3HDM1	100	94.384	ENSMPUG00000002412	R3HDM1	100	94.565	Mustela_putorius_furo
ENSRROG00000034534	R3HDM1	100	93.038	ENSMLUG00000013824	R3HDM1	100	93.038	Myotis_lucifugus
ENSRROG00000034534	R3HDM1	100	98.663	ENSNLEG00000008622	R3HDM1	100	98.895	Nomascus_leucogenys
ENSRROG00000034534	R3HDM1	89	72.737	ENSMEUG00000011784	R3HDM1	100	72.940	Notamacropus_eugenii
ENSRROG00000034534	R3HDM1	100	87.511	ENSODEG00000008607	R3HDM1	100	90.365	Octodon_degus
ENSRROG00000034534	R3HDM1	94	66.873	ENSONIG00000012017	r3hdm1	91	66.873	Oreochromis_niloticus
ENSRROG00000034534	R3HDM1	100	81.261	ENSOANG00000007987	R3HDM1	100	81.622	Ornithorhynchus_anatinus
ENSRROG00000034534	R3HDM1	89	92.886	ENSOCUG00000017366	R3HDM1	98	93.089	Oryctolagus_cuniculus
ENSRROG00000034534	R3HDM1	87	60.638	ENSORLG00000004297	r3hdm1	90	60.638	Oryzias_latipes
ENSRROG00000034534	R3HDM1	89	61.067	ENSORLG00015017355	r3hdm1	91	61.067	Oryzias_latipes_hsok
ENSRROG00000034534	R3HDM1	100	93.297	ENSOGAG00000003136	R3HDM1	100	93.207	Otolemur_garnettii
ENSRROG00000034534	R3HDM1	100	93.478	ENSOARG00000010788	R3HDM1	100	93.750	Ovis_aries
ENSRROG00000034534	R3HDM1	100	98.767	ENSPPAG00000027858	R3HDM1	100	99.448	Pan_paniscus
ENSRROG00000034534	R3HDM1	100	94.256	ENSPPRG00000002626	R3HDM1	100	97.238	Panthera_pardus
ENSRROG00000034534	R3HDM1	100	94.256	ENSPTIG00000016581	R3HDM1	100	97.514	Panthera_tigris_altaica
ENSRROG00000034534	R3HDM1	100	98.819	ENSPTRG00000012494	R3HDM1	100	99.448	Pan_troglodytes
ENSRROG00000034534	R3HDM1	100	99.280	ENSPANG00000026448	R3HDM1	100	99.448	Papio_anubis
ENSRROG00000034534	R3HDM1	94	76.358	ENSPKIG00000004328	r3hdm1	91	76.677	Paramormyrops_kingsleyae
ENSRROG00000034534	R3HDM1	100	78.681	ENSPSIG00000012915	R3HDM1	100	78.229	Pelodiscus_sinensis
ENSRROG00000034534	R3HDM1	100	87.775	ENSPEMG00000015187	R3hdm1	100	91.030	Peromyscus_maniculatus_bairdii
ENSRROG00000034534	R3HDM1	91	52.941	ENSPMAG00000003369	-	99	43.160	Petromyzon_marinus
ENSRROG00000034534	R3HDM1	100	90.934	ENSPCIG00000002491	R3HDM1	100	83.618	Phascolarctos_cinereus
ENSRROG00000034534	R3HDM1	87	55.474	ENSPFOG00000015036	r3hdm1	93	57.116	Poecilia_formosa
ENSRROG00000034534	R3HDM1	87	59.947	ENSPLAG00000018042	r3hdm1	91	59.947	Poecilia_latipinna
ENSRROG00000034534	R3HDM1	87	59.947	ENSPMEG00000023947	r3hdm1	91	59.947	Poecilia_mexicana
ENSRROG00000034534	R3HDM1	81	68.608	ENSPREG00000007902	r3hdm1	94	60.582	Poecilia_reticulata
ENSRROG00000034534	R3HDM1	100	97.712	ENSPPYG00000012815	R3HDM1	100	97.548	Pongo_abelii
ENSRROG00000034534	R3HDM1	100	81.868	ENSPCAG00000006208	R3HDM1	100	81.233	Procavia_capensis
ENSRROG00000034534	R3HDM1	100	93.984	ENSPCOG00000012698	R3HDM1	100	94.137	Propithecus_coquereli
ENSRROG00000034534	R3HDM1	100	85.947	ENSPVAG00000006098	R3HDM1	100	85.947	Pteropus_vampyrus
ENSRROG00000034534	R3HDM1	88	76.923	ENSPNAG00000005436	R3HDM1	99	76.849	Pygocentrus_nattereri
ENSRROG00000034534	R3HDM1	67	38.389	ENSPNAG00000004162	arpp21	85	39.753	Pygocentrus_nattereri
ENSRROG00000034534	R3HDM1	90	74.121	ENSPNAG00000013952	r3hdm1	87	70.190	Pygocentrus_nattereri
ENSRROG00000034534	R3HDM1	100	86.368	ENSRNOG00000004099	R3hdm1	100	84.169	Rattus_norvegicus
ENSRROG00000034534	R3HDM1	100	99.674	ENSRBIG00000033317	R3HDM1	100	100.000	Rhinopithecus_bieti
ENSRROG00000034534	R3HDM1	100	97.366	ENSSBOG00000020389	R3HDM1	100	98.066	Saimiri_boliviensis_boliviensis
ENSRROG00000034534	R3HDM1	100	84.087	ENSSHAG00000016999	R3HDM1	100	83.816	Sarcophilus_harrisii
ENSRROG00000034534	R3HDM1	100	56.217	ENSSFOG00015019851	-	95	63.158	Scleropages_formosus
ENSRROG00000034534	R3HDM1	89	78.505	ENSSFOG00015014134	r3hdm1	91	78.438	Scleropages_formosus
ENSRROG00000034534	R3HDM1	99	60.541	ENSSMAG00000001669	r3hdm1	99	44.606	Scophthalmus_maximus
ENSRROG00000034534	R3HDM1	87	62.766	ENSSDUG00000010749	r3hdm1	91	62.766	Seriola_dumerili
ENSRROG00000034534	R3HDM1	92	69.231	ENSSLDG00000004499	r3hdm1	91	57.457	Seriola_lalandi_dorsalis
ENSRROG00000034534	R3HDM1	74	79.348	ENSSARG00000000352	-	69	82.724	Sorex_araneus
ENSRROG00000034534	R3HDM1	100	80.054	ENSSPUG00000004167	R3HDM1	100	80.144	Sphenodon_punctatus
ENSRROG00000034534	R3HDM1	87	63.467	ENSSPAG00000004648	r3hdm1	91	63.467	Stegastes_partitus
ENSRROG00000034534	R3HDM1	100	94.746	ENSSSCG00000015692	R3HDM1	100	94.837	Sus_scrofa
ENSRROG00000034534	R3HDM1	100	73.646	ENSTGUG00000011750	R3HDM1	100	73.195	Taeniopygia_guttata
ENSRROG00000034534	R3HDM1	81	67.532	ENSTRUG00000011654	r3hdm1	91	57.841	Takifugu_rubripes
ENSRROG00000034534	R3HDM1	82	67.732	ENSTNIG00000010362	r3hdm1	99	45.573	Tetraodon_nigroviridis
ENSRROG00000034534	R3HDM1	100	87.217	ENSTTRG00000003935	R3HDM1	100	87.489	Tursiops_truncatus
ENSRROG00000034534	R3HDM1	70	96.010	ENSUAMG00000024806	R3HDM1	93	97.790	Ursus_americanus
ENSRROG00000034534	R3HDM1	100	93.949	ENSUMAG00000005552	R3HDM1	100	97.790	Ursus_maritimus
ENSRROG00000034534	R3HDM1	97	94.118	ENSVPAG00000007333	R3HDM1	93	91.228	Vicugna_pacos
ENSRROG00000034534	R3HDM1	100	97.514	ENSVVUG00000006457	R3HDM1	100	94.523	Vulpes_vulpes
ENSRROG00000034534	R3HDM1	90	67.304	ENSXETG00000019330	r3hdm1	100	67.372	Xenopus_tropicalis
ENSRROG00000034534	R3HDM1	71	50.000	ENSXCOG00000017448	r3hdm1	94	49.614	Xiphophorus_couchianus
ENSRROG00000034534	R3HDM1	81	68.285	ENSXMAG00000007885	r3hdm1	82	68.285	Xiphophorus_maculatus