EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000034959 (Gene tree)
Gene ID: 104672150
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 63447 bases
Position: chrKN297494.1:268182-331628
Accession: 104672150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000022162	FDF	PF09532.10	1.3e-18	1	1
ENSRROP00000022162	LSM14	PF12701.7	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000046358	EDC3-201	3762	XM_010375863	ENSRROP00000022162	508 (aa)	XP_010374165	A0A2K6Q057

Gene Model

Click here to download ENSRROG00000034959's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000034959's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000034959	EDC3	100	98.228	ENSG00000179151	EDC3	100	100.000	Homo_sapiens
ENSRROG00000034959	EDC3	100	55.922	ENSAPOG00000008655	EDC3	100	55.922	Acanthochromis_polyacanthus
ENSRROG00000034959	EDC3	100	70.000	ENSAPOG00000010791	edc3	100	70.000	Acanthochromis_polyacanthus
ENSRROG00000034959	EDC3	100	96.063	ENSAMEG00000008963	EDC3	100	96.063	Ailuropoda_melanoleuca
ENSRROG00000034959	EDC3	99	59.454	ENSACIG00000005330	EDC3	99	59.454	Amphilophus_citrinellus
ENSRROG00000034959	EDC3	100	68.762	ENSACIG00000017751	edc3	100	68.762	Amphilophus_citrinellus
ENSRROG00000034959	EDC3	100	70.000	ENSAOCG00000005431	edc3	100	70.000	Amphiprion_ocellaris
ENSRROG00000034959	EDC3	100	58.140	ENSAOCG00000009103	-	100	58.140	Amphiprion_ocellaris
ENSRROG00000034959	EDC3	100	70.000	ENSAPEG00000000968	edc3	100	70.000	Amphiprion_percula
ENSRROG00000034959	EDC3	100	58.140	ENSAPEG00000007841	EDC3	100	58.140	Amphiprion_percula
ENSRROG00000034959	EDC3	100	70.138	ENSATEG00000015505	edc3	100	70.138	Anabas_testudineus
ENSRROG00000034959	EDC3	100	57.308	ENSATEG00000004205	-	100	58.286	Anabas_testudineus
ENSRROG00000034959	EDC3	90	87.253	ENSAPLG00000008957	EDC3	100	87.253	Anas_platyrhynchos
ENSRROG00000034959	EDC3	78	87.909	ENSACAG00000000460	-	100	87.909	Anolis_carolinensis
ENSRROG00000034959	EDC3	100	98.425	ENSANAG00000024078	EDC3	100	98.425	Aotus_nancymaae
ENSRROG00000034959	EDC3	99	58.285	ENSACLG00000018776	-	99	58.285	Astatotilapia_calliptera
ENSRROG00000034959	EDC3	100	68.369	ENSACLG00000007232	edc3	100	68.369	Astatotilapia_calliptera
ENSRROG00000034959	EDC3	100	70.623	ENSAMXG00000001589	edc3	100	70.623	Astyanax_mexicanus
ENSRROG00000034959	EDC3	100	96.654	ENSBTAG00000007308	EDC3	100	96.654	Bos_taurus
ENSRROG00000034959	EDC3	100	98.425	ENSCJAG00000017681	EDC3	100	98.425	Callithrix_jacchus
ENSRROG00000034959	EDC3	100	96.850	ENSCAFG00000017935	EDC3	100	96.850	Canis_familiaris
ENSRROG00000034959	EDC3	100	96.850	ENSCAFG00020003909	EDC3	100	96.850	Canis_lupus_dingo
ENSRROG00000034959	EDC3	100	96.457	ENSCHIG00000023658	EDC3	100	96.457	Capra_hircus
ENSRROG00000034959	EDC3	100	96.850	ENSTSYG00000004822	EDC3	100	96.850	Carlito_syrichta
ENSRROG00000034959	EDC3	100	95.669	ENSCPOG00000015595	EDC3	100	95.669	Cavia_porcellus
ENSRROG00000034959	EDC3	100	98.819	ENSCCAG00000021663	EDC3	100	98.819	Cebus_capucinus
ENSRROG00000034959	EDC3	100	99.606	ENSCATG00000037511	EDC3	100	99.606	Cercocebus_atys
ENSRROG00000034959	EDC3	100	95.472	ENSCLAG00000005700	EDC3	100	95.472	Chinchilla_lanigera
ENSRROG00000034959	EDC3	100	99.606	ENSCSAG00000014239	EDC3	100	99.606	Chlorocebus_sabaeus
ENSRROG00000034959	EDC3	100	88.976	ENSCPBG00000024239	EDC3	100	88.976	Chrysemys_picta_bellii
ENSRROG00000034959	EDC3	100	39.080	ENSCING00000022142	-	99	39.080	Ciona_intestinalis
ENSRROG00000034959	EDC3	100	99.606	ENSCANG00000028699	EDC3	100	99.606	Colobus_angolensis_palliatus
ENSRROG00000034959	EDC3	100	97.047	ENSCGRG00001013874	Edc3	100	97.047	Cricetulus_griseus_chok1gshd
ENSRROG00000034959	EDC3	100	97.047	ENSCGRG00000011885	Edc3	100	97.047	Cricetulus_griseus_crigri
ENSRROG00000034959	EDC3	99	69.488	ENSCSEG00000012996	edc3	99	69.488	Cynoglossus_semilaevis
ENSRROG00000034959	EDC3	100	68.566	ENSCVAG00000008023	edc3	100	68.566	Cyprinodon_variegatus
ENSRROG00000034959	EDC3	99	68.750	ENSDARG00000051931	edc3	99	69.006	Danio_rerio
ENSRROG00000034959	EDC3	100	85.271	ENSDNOG00000030661	EDC3	100	85.271	Dasypus_novemcinctus
ENSRROG00000034959	EDC3	64	98.148	ENSETEG00000002398	-	64	98.148	Echinops_telfairi
ENSRROG00000034959	EDC3	100	97.441	ENSEASG00005005071	EDC3	100	97.441	Equus_asinus_asinus
ENSRROG00000034959	EDC3	100	97.441	ENSECAG00000017994	EDC3	100	97.441	Equus_caballus
ENSRROG00000034959	EDC3	100	62.109	ENSELUG00000007607	EDC3	100	62.109	Esox_lucius
ENSRROG00000034959	EDC3	100	65.887	ENSELUG00000005794	edc3	100	65.887	Esox_lucius
ENSRROG00000034959	EDC3	100	96.260	ENSFCAG00000002014	EDC3	100	96.260	Felis_catus
ENSRROG00000034959	EDC3	98	84.970	ENSFALG00000004543	EDC3	96	84.970	Ficedula_albicollis
ENSRROG00000034959	EDC3	100	95.866	ENSFDAG00000012582	EDC3	100	95.866	Fukomys_damarensis
ENSRROG00000034959	EDC3	100	69.412	ENSFHEG00000009375	edc3	100	69.412	Fundulus_heteroclitus
ENSRROG00000034959	EDC3	100	68.555	ENSGMOG00000002715	edc3	100	68.555	Gadus_morhua
ENSRROG00000034959	EDC3	100	88.780	ENSGALG00000040181	EDC3	100	88.780	Gallus_gallus
ENSRROG00000034959	EDC3	100	67.976	ENSGAFG00000014433	edc3	100	67.976	Gambusia_affinis
ENSRROG00000034959	EDC3	100	68.762	ENSGACG00000009783	edc3	100	68.762	Gasterosteus_aculeatus
ENSRROG00000034959	EDC3	99	55.278	ENSGACG00000014671	EDC3	99	56.311	Gasterosteus_aculeatus
ENSRROG00000034959	EDC3	100	88.780	ENSGAGG00000023477	EDC3	100	88.780	Gopherus_agassizii
ENSRROG00000034959	EDC3	100	98.425	ENSGGOG00000003552	EDC3	100	98.425	Gorilla_gorilla
ENSRROG00000034959	EDC3	99	58.285	ENSHBUG00000020817	EDC3	99	58.285	Haplochromis_burtoni
ENSRROG00000034959	EDC3	100	68.369	ENSHBUG00000003635	edc3	100	68.369	Haplochromis_burtoni
ENSRROG00000034959	EDC3	100	67.969	ENSHCOG00000016834	edc3	100	68.102	Hippocampus_comes
ENSRROG00000034959	EDC3	99	69.745	ENSIPUG00000005695	edc3	100	69.745	Ictalurus_punctatus
ENSRROG00000034959	EDC3	100	97.638	ENSSTOG00000013936	EDC3	100	97.638	Ictidomys_tridecemlineatus
ENSRROG00000034959	EDC3	100	95.472	ENSJJAG00000008074	Edc3	100	95.472	Jaculus_jaculus
ENSRROG00000034959	EDC3	100	68.959	ENSKMAG00000001243	edc3	100	68.885	Kryptolebias_marmoratus
ENSRROG00000034959	EDC3	100	55.750	ENSKMAG00000001987	EDC3	100	55.750	Kryptolebias_marmoratus
ENSRROG00000034959	EDC3	100	69.608	ENSLBEG00000013435	edc3	99	69.608	Labrus_bergylta
ENSRROG00000034959	EDC3	100	57.965	ENSLBEG00000017984	EDC3	100	57.965	Labrus_bergylta
ENSRROG00000034959	EDC3	100	77.864	ENSLACG00000014149	EDC3	100	77.864	Latimeria_chalumnae
ENSRROG00000034959	EDC3	99	67.383	ENSLOCG00000014625	edc3	99	67.641	Lepisosteus_oculatus
ENSRROG00000034959	EDC3	100	95.276	ENSLAFG00000002992	EDC3	100	95.276	Loxodonta_africana
ENSRROG00000034959	EDC3	100	99.213	ENSMFAG00000043074	EDC3	100	99.213	Macaca_fascicularis
ENSRROG00000034959	EDC3	100	99.213	ENSMMUG00000011071	EDC3	100	99.213	Macaca_mulatta
ENSRROG00000034959	EDC3	100	99.213	ENSMNEG00000035316	EDC3	100	99.213	Macaca_nemestrina
ENSRROG00000034959	EDC3	100	99.606	ENSMLEG00000030372	EDC3	100	99.606	Mandrillus_leucophaeus
ENSRROG00000034959	EDC3	99	56.445	ENSMAMG00000005423	-	99	56.445	Mastacembelus_armatus
ENSRROG00000034959	EDC3	100	70.138	ENSMAMG00000000505	edc3	100	70.138	Mastacembelus_armatus
ENSRROG00000034959	EDC3	99	58.789	ENSMZEG00005005654	EDC3	99	58.789	Maylandia_zebra
ENSRROG00000034959	EDC3	100	68.369	ENSMZEG00005004892	edc3	100	68.369	Maylandia_zebra
ENSRROG00000034959	EDC3	100	87.795	ENSMGAG00000002617	EDC3	100	87.795	Meleagris_gallopavo
ENSRROG00000034959	EDC3	100	96.850	ENSMICG00000043190	EDC3	100	96.850	Microcebus_murinus
ENSRROG00000034959	EDC3	100	97.047	ENSMOCG00000016205	Edc3	100	97.047	Microtus_ochrogaster
ENSRROG00000034959	EDC3	99	69.155	ENSMMOG00000012278	edc3	99	69.291	Mola_mola
ENSRROG00000034959	EDC3	100	93.307	ENSMODG00000009442	EDC3	100	93.307	Monodelphis_domestica
ENSRROG00000034959	EDC3	100	69.745	ENSMALG00000008658	edc3	100	69.745	Monopterus_albus
ENSRROG00000034959	EDC3	100	96.063	MGP_CAROLIEiJ_G0032280	Edc3	100	96.923	Mus_caroli
ENSRROG00000034959	EDC3	100	95.669	ENSMUSG00000038957	Edc3	100	96.923	Mus_musculus
ENSRROG00000034959	EDC3	100	96.260	MGP_PahariEiJ_G0015146	Edc3	100	96.923	Mus_pahari
ENSRROG00000034959	EDC3	100	95.472	MGP_SPRETEiJ_G0033420	Edc3	100	96.923	Mus_spretus
ENSRROG00000034959	EDC3	100	96.063	ENSMPUG00000017293	EDC3	100	96.063	Mustela_putorius_furo
ENSRROG00000034959	EDC3	100	97.059	ENSMLUG00000016382	EDC3	100	97.059	Myotis_lucifugus
ENSRROG00000034959	EDC3	100	96.260	ENSNGAG00000010923	Edc3	100	96.260	Nannospalax_galili
ENSRROG00000034959	EDC3	100	68.173	ENSNBRG00000002434	edc3	100	68.173	Neolamprologus_brichardi
ENSRROG00000034959	EDC3	99	58.789	ENSNBRG00000007881	EDC3	99	58.789	Neolamprologus_brichardi
ENSRROG00000034959	EDC3	100	88.780	ENSNLEG00000014577	EDC3	100	88.780	Nomascus_leucogenys
ENSRROG00000034959	EDC3	100	91.929	ENSMEUG00000009077	EDC3	100	91.929	Notamacropus_eugenii
ENSRROG00000034959	EDC3	79	96.296	ENSOPRG00000009540	-	79	96.296	Ochotona_princeps
ENSRROG00000034959	EDC3	99	60.039	ENSONIG00000002932	-	99	60.039	Oreochromis_niloticus
ENSRROG00000034959	EDC3	100	68.566	ENSONIG00000008434	edc3	100	68.566	Oreochromis_niloticus
ENSRROG00000034959	EDC3	78	91.436	ENSOCUG00000017740	EDC3	86	91.436	Oryctolagus_cuniculus
ENSRROG00000034959	EDC3	100	67.780	ENSORLG00000004883	edc3	100	67.780	Oryzias_latipes
ENSRROG00000034959	EDC3	100	56.836	ENSORLG00000014399	-	98	56.836	Oryzias_latipes
ENSRROG00000034959	EDC3	100	56.836	ENSORLG00020019446	-	100	56.836	Oryzias_latipes_hni
ENSRROG00000034959	EDC3	100	67.510	ENSORLG00020012262	edc3	100	67.510	Oryzias_latipes_hni
ENSRROG00000034959	EDC3	100	56.445	ENSORLG00015017635	-	96	56.445	Oryzias_latipes_hsok
ENSRROG00000034959	EDC3	100	67.578	ENSORLG00015005634	edc3	100	67.578	Oryzias_latipes_hsok
ENSRROG00000034959	EDC3	100	56.641	ENSOMEG00000017354	EDC3	100	56.641	Oryzias_melastigma
ENSRROG00000034959	EDC3	100	68.677	ENSOMEG00000014026	edc3	100	68.677	Oryzias_melastigma
ENSRROG00000034959	EDC3	100	97.244	ENSOGAG00000014441	EDC3	100	97.244	Otolemur_garnettii
ENSRROG00000034959	EDC3	100	96.071	ENSOARG00000003476	EDC3	100	96.071	Ovis_aries
ENSRROG00000034959	EDC3	100	98.425	ENSPPAG00000040143	EDC3	100	98.425	Pan_paniscus
ENSRROG00000034959	EDC3	100	96.654	ENSPPRG00000006257	EDC3	100	96.654	Panthera_pardus
ENSRROG00000034959	EDC3	100	96.654	ENSPTIG00000017424	EDC3	100	96.654	Panthera_tigris_altaica
ENSRROG00000034959	EDC3	100	98.425	ENSPTRG00000007279	EDC3	100	98.425	Pan_troglodytes
ENSRROG00000034959	EDC3	100	99.606	ENSPANG00000015997	EDC3	100	99.606	Papio_anubis
ENSRROG00000034959	EDC3	100	66.211	ENSPKIG00000019810	EDC3	100	66.211	Paramormyrops_kingsleyae
ENSRROG00000034959	EDC3	100	68.750	ENSPKIG00000004416	edc3	100	69.727	Paramormyrops_kingsleyae
ENSRROG00000034959	EDC3	100	83.268	ENSPSIG00000008474	EDC3	100	83.268	Pelodiscus_sinensis
ENSRROG00000034959	EDC3	100	67.123	ENSPMGG00000007223	edc3	100	67.123	Periophthalmus_magnuspinnatus
ENSRROG00000034959	EDC3	100	96.457	ENSPEMG00000015260	Edc3	100	96.457	Peromyscus_maniculatus_bairdii
ENSRROG00000034959	EDC3	100	90.748	ENSPCIG00000006276	EDC3	70	90.927	Phascolarctos_cinereus
ENSRROG00000034959	EDC3	100	69.155	ENSPFOG00000012204	edc3	100	69.155	Poecilia_formosa
ENSRROG00000034959	EDC3	100	69.155	ENSPLAG00000014420	edc3	100	69.155	Poecilia_latipinna
ENSRROG00000034959	EDC3	100	69.155	ENSPMEG00000023289	edc3	100	69.155	Poecilia_mexicana
ENSRROG00000034959	EDC3	100	69.352	ENSPREG00000016022	edc3	100	69.352	Poecilia_reticulata
ENSRROG00000034959	EDC3	100	97.244	ENSPPYG00000006642	EDC3	100	97.244	Pongo_abelii
ENSRROG00000034959	EDC3	88	100.000	ENSPCAG00000002802	EDC3	88	100.000	Procavia_capensis
ENSRROG00000034959	EDC3	100	97.441	ENSPCOG00000013364	EDC3	100	97.441	Propithecus_coquereli
ENSRROG00000034959	EDC3	100	95.866	ENSPVAG00000014733	EDC3	100	95.866	Pteropus_vampyrus
ENSRROG00000034959	EDC3	100	68.369	ENSPNYG00000021797	edc3	100	68.369	Pundamilia_nyererei
ENSRROG00000034959	EDC3	99	58.285	ENSPNYG00000009669	EDC3	99	58.285	Pundamilia_nyererei
ENSRROG00000034959	EDC3	100	69.557	ENSPNAG00000019657	edc3	100	69.557	Pygocentrus_nattereri
ENSRROG00000034959	EDC3	99	95.842	ENSRNOG00000019579	Edc3	99	95.842	Rattus_norvegicus
ENSRROG00000034959	EDC3	100	100.000	ENSRBIG00000019488	EDC3	100	100.000	Rhinopithecus_bieti
ENSRROG00000034959	EDC3	100	98.622	ENSSBOG00000004896	EDC3	100	98.622	Saimiri_boliviensis_boliviensis
ENSRROG00000034959	EDC3	96	92.229	ENSSHAG00000015075	EDC3	95	92.229	Sarcophilus_harrisii
ENSRROG00000034959	EDC3	100	64.981	ENSSFOG00015002439	edc3	100	64.981	Scleropages_formosus
ENSRROG00000034959	EDC3	100	70.428	ENSSFOG00015016939	edc3	100	71.206	Scleropages_formosus
ENSRROG00000034959	EDC3	100	69.352	ENSSMAG00000010695	edc3	100	69.352	Scophthalmus_maximus
ENSRROG00000034959	EDC3	99	57.895	ENSSMAG00000010176	-	99	57.895	Scophthalmus_maximus
ENSRROG00000034959	EDC3	100	60.117	ENSSDUG00000007671	EDC3	100	60.117	Seriola_dumerili
ENSRROG00000034959	EDC3	100	69.412	ENSSDUG00000021844	edc3	100	69.412	Seriola_dumerili
ENSRROG00000034959	EDC3	100	69.412	ENSSLDG00000022046	edc3	100	69.412	Seriola_lalandi_dorsalis
ENSRROG00000034959	EDC3	81	96.371	ENSSARG00000003907	EDC3	80	96.371	Sorex_araneus
ENSRROG00000034959	EDC3	100	88.780	ENSSPUG00000008232	EDC3	100	88.780	Sphenodon_punctatus
ENSRROG00000034959	EDC3	100	70.138	ENSSPAG00000010009	edc3	100	70.138	Stegastes_partitus
ENSRROG00000034959	EDC3	100	57.588	ENSSPAG00000020327	EDC3	100	58.171	Stegastes_partitus
ENSRROG00000034959	EDC3	100	97.441	ENSSSCG00000001903	EDC3	100	97.441	Sus_scrofa
ENSRROG00000034959	EDC3	100	88.583	ENSTGUG00000004007	EDC3	100	88.583	Taeniopygia_guttata
ENSRROG00000034959	EDC3	100	69.941	ENSTRUG00000017078	edc3	100	69.941	Takifugu_rubripes
ENSRROG00000034959	EDC3	100	68.689	ENSTNIG00000016047	edc3	100	68.689	Tetraodon_nigroviridis
ENSRROG00000034959	EDC3	100	96.654	ENSTTRG00000007990	EDC3	100	96.654	Tursiops_truncatus
ENSRROG00000034959	EDC3	100	96.063	ENSUAMG00000026710	-	100	96.063	Ursus_americanus
ENSRROG00000034959	EDC3	100	96.063	ENSUMAG00000005006	EDC3	96	96.063	Ursus_maritimus
ENSRROG00000034959	EDC3	79	87.037	ENSVPAG00000003499	-	79	87.037	Vicugna_pacos
ENSRROG00000034959	EDC3	100	96.850	ENSVVUG00000018601	EDC3	100	96.850	Vulpes_vulpes
ENSRROG00000034959	EDC3	68	82.471	ENSXETG00000010622	edc3	99	83.621	Xenopus_tropicalis
ENSRROG00000034959	EDC3	100	68.959	ENSXMAG00000007377	edc3	100	68.959	Xiphophorus_maculatus