EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000035578 (Gene tree)
Gene ID: 104681202
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 5297 bases
Position: chrKN299057.1:1459366-1464662
Accession: 104681202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000023470	RNA_pol_L_2	PF13656.6	4.3e-29	1	1
ENSRROP00000023463	RNA_pol_L_2	PF13656.6	6.2e-29	1	1
ENSRROP00000023476	RNA_pol_L_2	PF13656.6	1.1e-28	1	1
ENSRROP00000023466	RNA_pol_L_2	PF13656.6	3.6e-18	1	1
ENSRROP00000023470	RNA_pol_L	PF01193.24	4.9e-10	1	1
ENSRROP00000023463	RNA_pol_L	PF01193.24	6.8e-10	1	1
ENSRROP00000023476	RNA_pol_L	PF01193.24	1.1e-09	1	1
ENSRROP00000023466	RNA_pol_L	PF01193.24	0.00033	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000047671	-	264	-	ENSRROP00000023466	87 (aa)	-	A0A2K6Q3X0
ENSRROT00000047668	-	390	XM_010387416	ENSRROP00000023463	129 (aa)	XP_010385718	A0A2K6Q3W4
ENSRROT00000047675	-	444	-	ENSRROP00000023470	112 (aa)	-	A0A2K6Q3W1
ENSRROT00000047681	-	477	-	ENSRROP00000023476	158 (aa)	-	A0A2K6Q3X9

Gene Model

Click here to download ENSRROG00000035578's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03020	RNA polymerase	KEGG
rro05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000035578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000035578	-	87	33.000	ENSRROG00000042232	-	75	33.000
ENSRROG00000035578	-	87	33.000	ENSRROG00000026751	-	75	33.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000035578	-	100	100.000	ENSANAG00000020385	-	100	100.000	Aotus_nancymaae
ENSRROG00000035578	-	96	99.065	ENSBTAG00000005446	POLR2J	98	93.043	Bos_taurus
ENSRROG00000035578	-	99	96.396	ENSCAFG00020013154	-	98	93.043	Canis_lupus_dingo
ENSRROG00000035578	-	96	99.065	ENSCHIG00000009008	-	98	93.043	Capra_hircus
ENSRROG00000035578	-	91	90.196	ENSCAPG00000013625	-	96	83.065	Cavia_aperea
ENSRROG00000035578	-	100	100.000	ENSCCAG00000029378	-	100	100.000	Cebus_capucinus
ENSRROG00000035578	-	68	100.000	ENSCHOG00000008325	-	100	78.378	Choloepus_hoffmanni
ENSRROG00000035578	-	82	98.592	ENSCPBG00000027774	-	82	91.837	Chrysemys_picta_bellii
ENSRROG00000035578	-	100	100.000	ENSECAG00000022750	-	100	100.000	Equus_caballus
ENSRROG00000035578	-	94	76.829	ENSGGOG00000043186	-	100	68.987	Gorilla_gorilla
ENSRROG00000035578	-	79	85.915	ENSGGOG00000003934	-	90	90.991	Gorilla_gorilla
ENSRROG00000035578	-	90	92.958	ENSGGOG00000038950	-	82	92.958	Gorilla_gorilla
ENSRROG00000035578	-	69	95.000	ENSLACG00000022567	-	60	92.063	Latimeria_chalumnae
ENSRROG00000035578	-	100	100.000	ENSMFAG00000039168	-	100	100.000	Macaca_fascicularis
ENSRROG00000035578	-	100	96.855	ENSMLEG00000033262	-	100	96.855	Mandrillus_leucophaeus
ENSRROG00000035578	-	100	100.000	ENSMICG00000010323	-	100	100.000	Microcebus_murinus
ENSRROG00000035578	-	100	77.987	ENSPTRG00000050290	-	100	77.987	Pan_troglodytes
ENSRROG00000035578	-	90	77.465	ENSPTRG00000052689	-	95	77.465	Pan_troglodytes
ENSRROG00000035578	-	97	76.190	ENSPTRG00000028611	-	98	80.303	Pan_troglodytes
ENSRROG00000035578	-	96	99.065	ENSPTRG00000019132	-	100	94.340	Pan_troglodytes
ENSRROG00000035578	-	100	100.000	ENSPANG00000015179	-	100	100.000	Papio_anubis
ENSRROG00000035578	-	96	95.327	ENSPKIG00000013014	-	100	87.597	Paramormyrops_kingsleyae
ENSRROG00000035578	-	97	98.182	ENSPCAG00000003269	-	88	78.616	Procavia_capensis
ENSRROG00000035578	-	100	100.000	ENSRBIG00000042413	-	100	100.000	Rhinopithecus_bieti
ENSRROG00000035578	-	79	100.000	ENSTTRG00000014846	-	100	83.688	Tursiops_truncatus
ENSRROG00000035578	-	95	73.585	ENSVPAG00000007077	-	89	62.264	Vicugna_pacos
ENSRROG00000035578	-	96	99.065	ENSVVUG00000023727	-	98	93.043	Vulpes_vulpes