EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000035719 (Gene tree)
Gene ID: 104666802
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 88424 bases
Position: chrKN296404.1:2272357-2360780
Accession: 104666802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000023862	EST1	PF10374.9	1.1e-24	1	1
ENSRROP00000023863	EST1	PF10374.9	1.1e-24	1	1
ENSRROP00000023859	EST1	PF10374.9	1.1e-24	1	1
ENSRROP00000023868	EST1	PF10374.9	1.2e-24	1	1
ENSRROP00000023862	EST1_DNA_bind	PF10373.9	1.4e-55	1	1
ENSRROP00000023859	EST1_DNA_bind	PF10373.9	1.4e-55	1	1
ENSRROP00000023863	EST1_DNA_bind	PF10373.9	1.4e-55	1	1
ENSRROP00000023868	EST1_DNA_bind	PF10373.9	1.4e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000048071	SMG7-202	5919	XM_010368942	ENSRROP00000023862	1137 (aa)	XP_010367244	A0A2K6Q501
ENSRROT00000048072	SMG7-203	6067	XM_010368937	ENSRROP00000023863	1145 (aa)	XP_010367239	A0A2K6Q514
ENSRROT00000048077	SMG7-205	5811	XM_010368932	ENSRROP00000023868	1170 (aa)	XP_010367234	A0A2K6Q519
ENSRROT00000048075	SMG7-204	219	-	ENSRROP00000023866	73 (aa)	-	A0A2K6Q516
ENSRROT00000048068	SMG7-201	6486	XM_010368935	ENSRROP00000023859	1141 (aa)	XP_010367237	A0A2K6Q509

Gene Model

Click here to download ENSRROG00000035719's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000035719's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000035719	SMG7	100	99.402	ENSG00000116698	SMG7	100	100.000	Homo_sapiens
ENSRROG00000035719	SMG7	88	74.584	ENSAPOG00000009611	smg7	95	74.584	Acanthochromis_polyacanthus
ENSRROG00000035719	SMG7	100	96.943	ENSAMEG00000002357	SMG7	100	96.943	Ailuropoda_melanoleuca
ENSRROG00000035719	SMG7	100	61.942	ENSACIG00000015152	smg7	100	65.152	Amphilophus_citrinellus
ENSRROG00000035719	SMG7	100	65.482	ENSAOCG00000013538	smg7	99	66.923	Amphiprion_ocellaris
ENSRROG00000035719	SMG7	100	65.342	ENSAPEG00000007851	smg7	99	66.781	Amphiprion_percula
ENSRROG00000035719	SMG7	99	65.874	ENSATEG00000006931	smg7	99	66.384	Anabas_testudineus
ENSRROG00000035719	SMG7	100	88.976	ENSAPLG00000015811	SMG7	100	88.801	Anas_platyrhynchos
ENSRROG00000035719	SMG7	100	87.532	ENSACAG00000014989	SMG7	100	84.962	Anolis_carolinensis
ENSRROG00000035719	SMG7	100	98.690	ENSANAG00000028114	SMG7	100	98.681	Aotus_nancymaae
ENSRROG00000035719	SMG7	100	64.538	ENSACLG00000022079	smg7	99	66.410	Astatotilapia_calliptera
ENSRROG00000035719	SMG7	100	67.240	ENSAMXG00000020809	smg7	99	68.202	Astyanax_mexicanus
ENSRROG00000035719	SMG7	100	96.496	ENSBTAG00000008003	SMG7	100	96.496	Bos_taurus
ENSRROG00000035719	SMG7	100	98.428	ENSCJAG00000005135	SMG7	100	98.456	Callithrix_jacchus
ENSRROG00000035719	SMG7	100	97.350	ENSCAFG00000013276	SMG7	100	97.350	Canis_familiaris
ENSRROG00000035719	SMG7	100	97.350	ENSCAFG00020015475	SMG7	100	97.350	Canis_lupus_dingo
ENSRROG00000035719	SMG7	99	96.384	ENSCHIG00000018192	SMG7	99	96.470	Capra_hircus
ENSRROG00000035719	SMG7	100	97.361	ENSTSYG00000002667	SMG7	100	97.361	Carlito_syrichta
ENSRROG00000035719	SMG7	99	97.684	ENSCPOG00000008906	SMG7	100	97.684	Cavia_porcellus
ENSRROG00000035719	SMG7	100	98.952	ENSCCAG00000028596	SMG7	100	98.952	Cebus_capucinus
ENSRROG00000035719	SMG7	100	99.829	ENSCATG00000011063	SMG7	100	99.829	Cercocebus_atys
ENSRROG00000035719	SMG7	100	97.350	ENSCLAG00000010751	SMG7	100	97.350	Chinchilla_lanigera
ENSRROG00000035719	SMG7	100	99.658	ENSCSAG00000012654	SMG7	100	99.658	Chlorocebus_sabaeus
ENSRROG00000035719	SMG7	92	89.685	ENSCHOG00000010522	SMG7	93	90.067	Choloepus_hoffmanni
ENSRROG00000035719	SMG7	100	92.080	ENSCPBG00000015724	SMG7	100	91.674	Chrysemys_picta_bellii
ENSRROG00000035719	SMG7	100	99.913	ENSCANG00000015680	SMG7	100	99.913	Colobus_angolensis_palliatus
ENSRROG00000035719	SMG7	100	96.144	ENSCGRG00001013705	Smg7	100	96.226	Cricetulus_griseus_chok1gshd
ENSRROG00000035719	SMG7	99	96.028	ENSCGRG00000018401	Smg7	100	96.171	Cricetulus_griseus_crigri
ENSRROG00000035719	SMG7	97	69.000	ENSCVAG00000011842	smg7	99	69.000	Cyprinodon_variegatus
ENSRROG00000035719	SMG7	100	67.009	ENSDARG00000060767	smg7	99	67.848	Danio_rerio
ENSRROG00000035719	SMG7	100	96.582	ENSDORG00000007331	Smg7	100	96.606	Dipodomys_ordii
ENSRROG00000035719	SMG7	97	96.196	ENSETEG00000002654	SMG7	100	96.196	Echinops_telfairi
ENSRROG00000035719	SMG7	100	97.897	ENSEASG00005006524	SMG7	100	97.897	Equus_asinus_asinus
ENSRROG00000035719	SMG7	100	97.984	ENSECAG00000004313	SMG7	100	97.984	Equus_caballus
ENSRROG00000035719	SMG7	97	95.837	ENSEEUG00000002024	SMG7	94	95.837	Erinaceus_europaeus
ENSRROG00000035719	SMG7	100	65.424	ENSELUG00000010293	smg7	99	65.959	Esox_lucius
ENSRROG00000035719	SMG7	100	97.634	ENSFCAG00000010900	SMG7	100	97.699	Felis_catus
ENSRROG00000035719	SMG7	100	86.111	ENSFALG00000003047	SMG7	98	86.024	Ficedula_albicollis
ENSRROG00000035719	SMG7	99	96.839	ENSFDAG00000012121	SMG7	99	97.237	Fukomys_damarensis
ENSRROG00000035719	SMG7	99	64.605	ENSFHEG00000011073	smg7	99	63.969	Fundulus_heteroclitus
ENSRROG00000035719	SMG7	82	73.320	ENSGMOG00000004916	smg7	92	67.591	Gadus_morhua
ENSRROG00000035719	SMG7	100	89.336	ENSGALG00000004667	SMG7	100	89.161	Gallus_gallus
ENSRROG00000035719	SMG7	99	64.741	ENSGAFG00000019000	smg7	99	64.569	Gambusia_affinis
ENSRROG00000035719	SMG7	97	64.773	ENSGACG00000001634	smg7	99	65.240	Gasterosteus_aculeatus
ENSRROG00000035719	SMG7	100	99.301	ENSGGOG00000002342	SMG7	100	99.301	Gorilla_gorilla
ENSRROG00000035719	SMG7	100	65.140	ENSHBUG00000003726	smg7	97	72.589	Haplochromis_burtoni
ENSRROG00000035719	SMG7	100	97.274	ENSHGLG00000009353	SMG7	100	97.326	Heterocephalus_glaber_female
ENSRROG00000035719	SMG7	100	97.361	ENSHGLG00100009637	-	100	97.361	Heterocephalus_glaber_male
ENSRROG00000035719	SMG7	100	89.308	ENSHGLG00100004878	-	100	89.308	Heterocephalus_glaber_male
ENSRROG00000035719	SMG7	100	68.017	ENSIPUG00000016997	smg7	99	68.586	Ictalurus_punctatus
ENSRROG00000035719	SMG7	100	98.160	ENSSTOG00000000401	SMG7	100	98.172	Ictidomys_tridecemlineatus
ENSRROG00000035719	SMG7	100	95.618	ENSJJAG00000012351	Smg7	100	95.618	Jaculus_jaculus
ENSRROG00000035719	SMG7	93	70.500	ENSKMAG00000004900	smg7	97	70.500	Kryptolebias_marmoratus
ENSRROG00000035719	SMG7	99	66.264	ENSLBEG00000002983	smg7	99	66.437	Labrus_bergylta
ENSRROG00000035719	SMG7	52	63.000	ENSLBEG00000005220	-	75	64.623	Labrus_bergylta
ENSRROG00000035719	SMG7	99	75.737	ENSLACG00000000972	SMG7	99	75.847	Latimeria_chalumnae
ENSRROG00000035719	SMG7	100	69.244	ENSLOCG00000002010	smg7	99	67.893	Lepisosteus_oculatus
ENSRROG00000035719	SMG7	99	97.350	ENSLAFG00000008186	SMG7	100	97.302	Loxodonta_africana
ENSRROG00000035719	SMG7	100	99.744	ENSMFAG00000031653	SMG7	100	99.744	Macaca_fascicularis
ENSRROG00000035719	SMG7	100	99.829	ENSMMUG00000018458	SMG7	100	99.829	Macaca_mulatta
ENSRROG00000035719	SMG7	100	99.825	ENSMNEG00000034798	SMG7	100	99.825	Macaca_nemestrina
ENSRROG00000035719	SMG7	100	99.829	ENSMLEG00000037170	SMG7	100	99.829	Mandrillus_leucophaeus
ENSRROG00000035719	SMG7	88	65.344	ENSMAMG00000018733	smg7	85	65.571	Mastacembelus_armatus
ENSRROG00000035719	SMG7	100	65.004	ENSMZEG00005015247	smg7	99	65.983	Maylandia_zebra
ENSRROG00000035719	SMG7	97	89.218	ENSMGAG00000001561	SMG7	98	89.039	Meleagris_gallopavo
ENSRROG00000035719	SMG7	100	96.582	ENSMAUG00000019484	Smg7	100	96.606	Mesocricetus_auratus
ENSRROG00000035719	SMG7	100	98.329	ENSMICG00000007145	SMG7	100	98.329	Microcebus_murinus
ENSRROG00000035719	SMG7	100	96.407	ENSMOCG00000020748	Smg7	100	96.432	Microtus_ochrogaster
ENSRROG00000035719	SMG7	99	64.298	ENSMMOG00000001524	smg7	99	64.589	Mola_mola
ENSRROG00000035719	SMG7	92	93.169	ENSMODG00000007139	SMG7	99	93.169	Monodelphis_domestica
ENSRROG00000035719	SMG7	97	68.159	ENSMALG00000000061	smg7	95	68.159	Monopterus_albus
ENSRROG00000035719	SMG7	100	96.144	MGP_CAROLIEiJ_G0014704	Smg7	100	95.822	Mus_caroli
ENSRROG00000035719	SMG7	100	96.056	ENSMUSG00000042772	Smg7	100	96.084	Mus_musculus
ENSRROG00000035719	SMG7	100	96.144	MGP_PahariEiJ_G0027940	Smg7	100	96.171	Mus_pahari
ENSRROG00000035719	SMG7	100	96.144	MGP_SPRETEiJ_G0015511	Smg7	100	96.171	Mus_spretus
ENSRROG00000035719	SMG7	98	97.326	ENSMPUG00000011732	SMG7	97	97.326	Mustela_putorius_furo
ENSRROG00000035719	SMG7	99	96.734	ENSMLUG00000015417	SMG7	99	96.734	Myotis_lucifugus
ENSRROG00000035719	SMG7	100	96.306	ENSNGAG00000009836	Smg7	100	96.606	Nannospalax_galili
ENSRROG00000035719	SMG7	98	61.391	ENSNBRG00000024343	smg7	98	70.476	Neolamprologus_brichardi
ENSRROG00000035719	SMG7	100	99.573	ENSNLEG00000018018	SMG7	100	99.573	Nomascus_leucogenys
ENSRROG00000035719	SMG7	77	86.704	ENSMEUG00000004681	SMG7	73	92.276	Notamacropus_eugenii
ENSRROG00000035719	SMG7	96	84.840	ENSOPRG00000013942	SMG7	96	84.658	Ochotona_princeps
ENSRROG00000035719	SMG7	100	97.371	ENSODEG00000010390	SMG7	100	97.389	Octodon_degus
ENSRROG00000035719	SMG7	99	65.114	ENSONIG00000000277	smg7	99	66.096	Oreochromis_niloticus
ENSRROG00000035719	SMG7	98	91.135	ENSOANG00000000994	SMG7	100	91.046	Ornithorhynchus_anatinus
ENSRROG00000035719	SMG7	100	89.829	ENSOCUG00000005887	SMG7	95	90.000	Oryctolagus_cuniculus
ENSRROG00000035719	SMG7	100	62.713	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSRROG00000035719	SMG7	100	63.311	ENSORLG00020015779	smg7	99	63.934	Oryzias_latipes_hni
ENSRROG00000035719	SMG7	99	64.686	ENSORLG00015012289	smg7	99	63.629	Oryzias_latipes_hsok
ENSRROG00000035719	SMG7	100	62.925	ENSOMEG00000002328	smg7	99	62.843	Oryzias_melastigma
ENSRROG00000035719	SMG7	97	96.192	ENSOGAG00000003107	SMG7	94	96.102	Otolemur_garnettii
ENSRROG00000035719	SMG7	100	96.325	ENSOARG00000001352	SMG7	100	96.325	Ovis_aries
ENSRROG00000035719	SMG7	100	99.563	ENSPPAG00000031619	SMG7	100	99.563	Pan_paniscus
ENSRROG00000035719	SMG7	100	97.889	ENSPPRG00000011222	SMG7	100	97.889	Panthera_pardus
ENSRROG00000035719	SMG7	100	97.817	ENSPTIG00000007242	SMG7	100	97.817	Panthera_tigris_altaica
ENSRROG00000035719	SMG7	100	99.563	ENSPTRG00000001764	SMG7	100	99.563	Pan_troglodytes
ENSRROG00000035719	SMG7	100	99.829	ENSPANG00000004520	SMG7	100	99.829	Papio_anubis
ENSRROG00000035719	SMG7	100	65.285	ENSPKIG00000007242	smg7	99	68.500	Paramormyrops_kingsleyae
ENSRROG00000035719	SMG7	99	92.056	ENSPSIG00000012201	SMG7	99	91.792	Pelodiscus_sinensis
ENSRROG00000035719	SMG7	59	57.653	ENSPMGG00000021833	smg7	89	57.000	Periophthalmus_magnuspinnatus
ENSRROG00000035719	SMG7	100	95.267	ENSPEMG00000011315	Smg7	100	95.300	Peromyscus_maniculatus_bairdii
ENSRROG00000035719	SMG7	100	93.630	ENSPCIG00000003786	SMG7	100	93.409	Phascolarctos_cinereus
ENSRROG00000035719	SMG7	100	63.629	ENSPFOG00000019219	smg7	99	63.433	Poecilia_formosa
ENSRROG00000035719	SMG7	99	64.858	ENSPLAG00000001446	smg7	99	64.686	Poecilia_latipinna
ENSRROG00000035719	SMG7	96	64.146	ENSPMEG00000005218	smg7	99	63.968	Poecilia_mexicana
ENSRROG00000035719	SMG7	87	61.919	ENSPREG00000019039	smg7	91	61.858	Poecilia_reticulata
ENSRROG00000035719	SMG7	100	99.648	ENSPPYG00000000427	SMG7	100	99.648	Pongo_abelii
ENSRROG00000035719	SMG7	95	85.701	ENSPCAG00000008360	SMG7	94	85.701	Procavia_capensis
ENSRROG00000035719	SMG7	100	98.205	ENSPCOG00000011996	SMG7	100	98.205	Propithecus_coquereli
ENSRROG00000035719	SMG7	92	91.396	ENSPVAG00000000851	SMG7	89	91.731	Pteropus_vampyrus
ENSRROG00000035719	SMG7	100	64.996	ENSPNYG00000007643	smg7	99	66.265	Pundamilia_nyererei
ENSRROG00000035719	SMG7	100	67.808	ENSPNAG00000011374	smg7	98	69.697	Pygocentrus_nattereri
ENSRROG00000035719	SMG7	100	95.972	ENSRNOG00000027962	Smg7	100	96.429	Rattus_norvegicus
ENSRROG00000035719	SMG7	100	100.000	ENSRBIG00000036316	SMG7	100	100.000	Rhinopithecus_bieti
ENSRROG00000035719	SMG7	100	98.865	ENSSBOG00000023454	SMG7	100	98.865	Saimiri_boliviensis_boliviensis
ENSRROG00000035719	SMG7	100	93.064	ENSSHAG00000013147	SMG7	100	92.801	Sarcophilus_harrisii
ENSRROG00000035719	SMG7	92	76.842	ENSSFOG00015017252	smg7	99	76.842	Scleropages_formosus
ENSRROG00000035719	SMG7	100	65.444	ENSSMAG00000006067	smg7	99	66.064	Scophthalmus_maximus
ENSRROG00000035719	SMG7	96	72.504	ENSSDUG00000017543	smg7	99	65.934	Seriola_dumerili
ENSRROG00000035719	SMG7	99	90.371	ENSSPUG00000002064	SMG7	99	90.194	Sphenodon_punctatus
ENSRROG00000035719	SMG7	100	66.062	ENSSPAG00000008733	smg7	100	65.978	Stegastes_partitus
ENSRROG00000035719	SMG7	100	97.634	ENSSSCG00000015558	SMG7	100	97.634	Sus_scrofa
ENSRROG00000035719	SMG7	99	89.251	ENSTGUG00000003928	SMG7	100	89.163	Taeniopygia_guttata
ENSRROG00000035719	SMG7	99	64.064	ENSTNIG00000002802	smg7	99	64.027	Tetraodon_nigroviridis
ENSRROG00000035719	SMG7	78	96.610	ENSTBEG00000003220	SMG7	75	96.610	Tupaia_belangeri
ENSRROG00000035719	SMG7	96	97.352	ENSTTRG00000014778	SMG7	94	97.352	Tursiops_truncatus
ENSRROG00000035719	SMG7	96	93.425	ENSUAMG00000017473	SMG7	100	93.425	Ursus_americanus
ENSRROG00000035719	SMG7	100	93.537	ENSUMAG00000016389	SMG7	100	97.452	Ursus_maritimus
ENSRROG00000035719	SMG7	100	97.546	ENSVVUG00000008976	SMG7	100	97.546	Vulpes_vulpes
ENSRROG00000035719	SMG7	100	71.144	ENSXETG00000012528	smg7	100	71.119	Xenopus_tropicalis
ENSRROG00000035719	SMG7	99	64.464	ENSXMAG00000007123	smg7	99	64.635	Xiphophorus_maculatus