EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000036546 (Gene tree)
Gene ID: 104665523
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 87160 bases
Position: chrKN296157.1:1132040-1219199
Accession: 104665523
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000025606	zf-CCCH	PF00642.24	0.00033	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000049824	RC3H1-201	5256	XM_010367374	ENSRROP00000025606	1133 (aa)	XP_010365676	A0A2K6QA15

Gene Model

Click here to download ENSRROG00000036546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000036546's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000036546	RC3H1	92	54.178	ENSRROG00000043784	RC3H2	94	83.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000036546	RC3H1	100	99.117	ENSG00000135870	RC3H1	100	99.117	Homo_sapiens
ENSRROG00000036546	RC3H1	100	97.087	ENSAMEG00000015657	RC3H1	100	97.087	Ailuropoda_melanoleuca
ENSRROG00000036546	RC3H1	100	88.230	ENSAPLG00000005341	RC3H1	100	88.230	Anas_platyrhynchos
ENSRROG00000036546	RC3H1	100	85.253	ENSACAG00000015271	RC3H1	100	85.253	Anolis_carolinensis
ENSRROG00000036546	RC3H1	100	98.941	ENSANAG00000036716	RC3H1	100	98.941	Aotus_nancymaae
ENSRROG00000036546	RC3H1	100	95.852	ENSBTAG00000052708	RC3H1	100	95.852	Bos_taurus
ENSRROG00000036546	RC3H1	100	98.676	ENSCJAG00000009106	RC3H1	100	98.676	Callithrix_jacchus
ENSRROG00000036546	RC3H1	100	96.999	ENSCAFG00000014434	RC3H1	100	96.999	Canis_familiaris
ENSRROG00000036546	RC3H1	100	96.914	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSRROG00000036546	RC3H1	100	96.205	ENSCHIG00000002873	RC3H1	100	96.205	Capra_hircus
ENSRROG00000036546	RC3H1	99	95.410	ENSTSYG00000003913	RC3H1	99	95.410	Carlito_syrichta
ENSRROG00000036546	RC3H1	100	91.623	ENSCPOG00000004349	RC3H1	100	91.358	Cavia_porcellus
ENSRROG00000036546	RC3H1	100	96.823	ENSCCAG00000025652	RC3H1	100	96.823	Cebus_capucinus
ENSRROG00000036546	RC3H1	100	99.647	ENSCATG00000033497	RC3H1	100	99.647	Cercocebus_atys
ENSRROG00000036546	RC3H1	100	94.974	ENSCLAG00000011267	RC3H1	100	94.974	Chinchilla_lanigera
ENSRROG00000036546	RC3H1	96	99.355	ENSCSAG00000011823	RC3H1	85	99.355	Chlorocebus_sabaeus
ENSRROG00000036546	RC3H1	100	89.737	ENSCPBG00000014670	RC3H1	100	89.737	Chrysemys_picta_bellii
ENSRROG00000036546	RC3H1	100	99.471	ENSCANG00000032120	RC3H1	100	99.471	Colobus_angolensis_palliatus
ENSRROG00000036546	RC3H1	100	94.263	ENSCGRG00001020812	Rc3h1	100	93.822	Cricetulus_griseus_chok1gshd
ENSRROG00000036546	RC3H1	100	94.263	ENSCGRG00000011952	Rc3h1	100	93.822	Cricetulus_griseus_crigri
ENSRROG00000036546	RC3H1	55	95.498	ENSDNOG00000011494	RC3H1	99	95.498	Dasypus_novemcinctus
ENSRROG00000036546	RC3H1	100	95.852	ENSDORG00000004855	Rc3h1	100	95.852	Dipodomys_ordii
ENSRROG00000036546	RC3H1	81	96.766	ENSETEG00000012064	RC3H1	87	96.766	Echinops_telfairi
ENSRROG00000036546	RC3H1	100	95.940	ENSEASG00005017000	RC3H1	100	95.940	Equus_asinus_asinus
ENSRROG00000036546	RC3H1	100	95.763	ENSECAG00000021208	RC3H1	100	95.763	Equus_caballus
ENSRROG00000036546	RC3H1	83	97.059	ENSEEUG00000014861	RC3H1	93	83.302	Erinaceus_europaeus
ENSRROG00000036546	RC3H1	100	97.352	ENSFCAG00000014924	RC3H1	100	97.352	Felis_catus
ENSRROG00000036546	RC3H1	100	87.336	ENSFALG00000002947	RC3H1	100	86.812	Ficedula_albicollis
ENSRROG00000036546	RC3H1	100	95.150	ENSFDAG00000013303	RC3H1	100	95.150	Fukomys_damarensis
ENSRROG00000036546	RC3H1	100	87.204	ENSGALG00000004587	RC3H1	100	87.204	Gallus_gallus
ENSRROG00000036546	RC3H1	100	88.081	ENSGAGG00000018194	RC3H1	100	88.344	Gopherus_agassizii
ENSRROG00000036546	RC3H1	100	92.172	ENSGGOG00000005735	RC3H1	100	92.172	Gorilla_gorilla
ENSRROG00000036546	RC3H1	88	88.904	ENSHGLG00000004183	-	99	88.859	Heterocephalus_glaber_female
ENSRROG00000036546	RC3H1	100	94.533	ENSHGLG00100008577	RC3H1	100	94.533	Heterocephalus_glaber_male
ENSRROG00000036546	RC3H1	100	96.473	ENSSTOG00000016033	RC3H1	100	96.473	Ictidomys_tridecemlineatus
ENSRROG00000036546	RC3H1	100	95.234	ENSJJAG00000018915	Rc3h1	100	95.057	Jaculus_jaculus
ENSRROG00000036546	RC3H1	100	75.391	ENSLACG00000016186	RC3H1	100	78.489	Latimeria_chalumnae
ENSRROG00000036546	RC3H1	97	97.450	ENSLAFG00000004367	RC3H1	100	97.450	Loxodonta_africana
ENSRROG00000036546	RC3H1	100	99.559	ENSMFAG00000033725	RC3H1	100	99.559	Macaca_fascicularis
ENSRROG00000036546	RC3H1	100	99.470	ENSMMUG00000000630	RC3H1	100	99.470	Macaca_mulatta
ENSRROG00000036546	RC3H1	100	99.647	ENSMNEG00000035968	RC3H1	100	99.647	Macaca_nemestrina
ENSRROG00000036546	RC3H1	100	99.559	ENSMLEG00000037455	RC3H1	100	99.559	Mandrillus_leucophaeus
ENSRROG00000036546	RC3H1	97	94.355	ENSMAUG00000020864	Rc3h1	100	93.851	Mesocricetus_auratus
ENSRROG00000036546	RC3H1	100	97.440	ENSMICG00000003000	RC3H1	100	97.440	Microcebus_murinus
ENSRROG00000036546	RC3H1	93	93.087	ENSMOCG00000016587	Rc3h1	98	92.708	Microtus_ochrogaster
ENSRROG00000036546	RC3H1	100	92.416	ENSMODG00000004289	RC3H1	100	92.504	Monodelphis_domestica
ENSRROG00000036546	RC3H1	100	93.998	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.557	Mus_caroli
ENSRROG00000036546	RC3H1	100	93.822	ENSMUSG00000040423	Rc3h1	100	93.380	Mus_musculus
ENSRROG00000036546	RC3H1	100	93.645	MGP_PahariEiJ_G0027992	Rc3h1	100	93.204	Mus_pahari
ENSRROG00000036546	RC3H1	100	93.645	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.204	Mus_spretus
ENSRROG00000036546	RC3H1	100	96.649	ENSMPUG00000004747	RC3H1	100	96.649	Mustela_putorius_furo
ENSRROG00000036546	RC3H1	100	95.499	ENSMLUG00000011127	RC3H1	100	95.499	Myotis_lucifugus
ENSRROG00000036546	RC3H1	100	95.852	ENSNGAG00000011135	Rc3h1	100	95.410	Nannospalax_galili
ENSRROG00000036546	RC3H1	100	99.029	ENSNLEG00000015327	RC3H1	100	99.029	Nomascus_leucogenys
ENSRROG00000036546	RC3H1	99	82.759	ENSOPRG00000013068	RC3H1	99	82.847	Ochotona_princeps
ENSRROG00000036546	RC3H1	100	94.621	ENSODEG00000014185	RC3H1	100	94.621	Octodon_degus
ENSRROG00000036546	RC3H1	100	91.616	ENSOANG00000000924	RC3H1	100	91.528	Ornithorhynchus_anatinus
ENSRROG00000036546	RC3H1	99	95.971	ENSOCUG00000004930	RC3H1	98	95.971	Oryctolagus_cuniculus
ENSRROG00000036546	RC3H1	100	90.220	ENSOGAG00000004044	RC3H1	100	90.220	Otolemur_garnettii
ENSRROG00000036546	RC3H1	100	96.491	ENSOARG00000013011	RC3H1	100	96.491	Ovis_aries
ENSRROG00000036546	RC3H1	100	99.118	ENSPPAG00000039253	RC3H1	100	99.118	Pan_paniscus
ENSRROG00000036546	RC3H1	100	96.646	ENSPPRG00000009007	RC3H1	100	96.646	Panthera_pardus
ENSRROG00000036546	RC3H1	100	97.012	ENSPTIG00000015326	RC3H1	100	97.012	Panthera_tigris_altaica
ENSRROG00000036546	RC3H1	100	99.118	ENSPTRG00000001702	RC3H1	100	99.118	Pan_troglodytes
ENSRROG00000036546	RC3H1	100	99.559	ENSPANG00000008886	RC3H1	100	99.559	Papio_anubis
ENSRROG00000036546	RC3H1	100	88.869	ENSPSIG00000016181	RC3H1	100	89.132	Pelodiscus_sinensis
ENSRROG00000036546	RC3H1	100	93.733	ENSPEMG00000011966	Rc3h1	100	93.380	Peromyscus_maniculatus_bairdii
ENSRROG00000036546	RC3H1	70	94.304	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSRROG00000036546	RC3H1	100	95.763	ENSPPYG00000000490	RC3H1	98	98.373	Pongo_abelii
ENSRROG00000036546	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSRROG00000036546	RC3H1	83	96.688	ENSPCOG00000021795	RC3H1	96	96.688	Propithecus_coquereli
ENSRROG00000036546	RC3H1	100	87.996	ENSPVAG00000007593	RC3H1	100	87.996	Pteropus_vampyrus
ENSRROG00000036546	RC3H1	97	61.804	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSRROG00000036546	RC3H1	100	99.735	ENSRBIG00000037743	RC3H1	100	99.735	Rhinopithecus_bieti
ENSRROG00000036546	RC3H1	93	90.057	ENSSBOG00000010664	RC3H1	100	92.431	Saimiri_boliviensis_boliviensis
ENSRROG00000036546	RC3H1	100	91.278	ENSSHAG00000007589	RC3H1	100	91.366	Sarcophilus_harrisii
ENSRROG00000036546	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSRROG00000036546	RC3H1	100	84.501	ENSSPUG00000018472	RC3H1	100	83.961	Sphenodon_punctatus
ENSRROG00000036546	RC3H1	100	97.352	ENSSSCG00000015498	RC3H1	100	97.352	Sus_scrofa
ENSRROG00000036546	RC3H1	100	87.632	ENSTGUG00000004090	RC3H1	100	87.632	Taeniopygia_guttata
ENSRROG00000036546	RC3H1	89	96.748	ENSTBEG00000005015	RC3H1	89	96.748	Tupaia_belangeri
ENSRROG00000036546	RC3H1	100	96.564	ENSTTRG00000008572	RC3H1	100	96.564	Tursiops_truncatus
ENSRROG00000036546	RC3H1	100	96.470	ENSUAMG00000019525	RC3H1	100	96.470	Ursus_americanus
ENSRROG00000036546	RC3H1	100	97.002	ENSUMAG00000020087	RC3H1	100	97.002	Ursus_maritimus
ENSRROG00000036546	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSRROG00000036546	RC3H1	100	96.658	ENSVVUG00000014201	RC3H1	100	96.658	Vulpes_vulpes
ENSRROG00000036546	RC3H1	100	79.025	ENSXETG00000020030	rc3h1	100	78.571	Xenopus_tropicalis