EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000036656 (Gene tree)
Gene ID: 104677624
Gene Symbol: -
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 54115 bases
Position: chrKN298527.1:4201172-4255286
Accession: 104677624
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000025847	RRM_1	PF00076.22	2.7e-13	1	1
ENSRROP00000025850	RRM_1	PF00076.22	2.7e-13	1	1
ENSRROP00000025848	RRM_1	PF00076.22	4e-13	1	1
ENSRROP00000025846	RRM_1	PF00076.22	4.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000050071	-	279	-	ENSRROP00000025850	93 (aa)	-	A0A2K6QAN9
ENSRROT00000050068	-	297	-	ENSRROP00000025847	98 (aa)	-	A0A2K6QAN2
ENSRROT00000050069	-	327	XM_010354634	ENSRROP00000025848	108 (aa)	XP_010352936	A0A2K6QAQ3
ENSRROT00000050067	-	339	-	ENSRROP00000025846	112 (aa)	-	A0A2K6QAQ0

Gene Model

Click here to download ENSRROG00000036656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000036656's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000036656	-	100	95.833	ENSRROG00000017133	-	100	95.833
ENSRROG00000036656	-	89	34.286	ENSRROG00000035729	HNRNPAB	51	34.286
ENSRROG00000036656	-	72	31.343	ENSRROG00000034421	-	51	31.343
ENSRROG00000036656	-	96	95.506	ENSRROG00000041312	-	87	96.591
ENSRROG00000036656	-	92	96.512	ENSRROG00000035604	-	86	96.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000036656	-	84	85.897	ENSG00000119705	SLIRP	100	85.870	Homo_sapiens
ENSRROG00000036656	-	81	53.409	ENSAPOG00000001298	slirp	88	53.409	Acanthochromis_polyacanthus
ENSRROG00000036656	-	96	79.775	ENSAMEG00000003975	SLIRP	88	77.500	Ailuropoda_melanoleuca
ENSRROG00000036656	-	81	54.545	ENSACIG00000023083	slirp	87	54.545	Amphilophus_citrinellus
ENSRROG00000036656	-	81	53.409	ENSAOCG00000006342	slirp	89	53.409	Amphiprion_ocellaris
ENSRROG00000036656	-	81	53.409	ENSAPEG00000015917	slirp	89	53.409	Amphiprion_percula
ENSRROG00000036656	-	81	53.409	ENSAPEG00000015719	-	90	53.409	Amphiprion_percula
ENSRROG00000036656	-	72	61.194	ENSATEG00000013525	slirp	74	60.811	Anabas_testudineus
ENSRROG00000036656	-	79	52.941	ENSAMXG00000018693	slirp	85	52.941	Astyanax_mexicanus
ENSRROG00000036656	-	99	86.957	ENSCJAG00000016946	SLIRP	87	88.889	Callithrix_jacchus
ENSRROG00000036656	-	100	74.775	ENSCAFG00020015876	-	90	74.000	Canis_lupus_dingo
ENSRROG00000036656	-	100	79.630	ENSCCAG00000030130	SLIRP	90	80.412	Cebus_capucinus
ENSRROG00000036656	-	100	95.918	ENSCATG00000036327	SLIRP	89	96.552	Cercocebus_atys
ENSRROG00000036656	-	96	95.506	ENSCSAG00000011736	SLIRP	90	93.878	Chlorocebus_sabaeus
ENSRROG00000036656	-	72	61.194	ENSCPBG00000026327	SLIRP	71	60.000	Chrysemys_picta_bellii
ENSRROG00000036656	-	100	96.939	ENSCANG00000032892	SLIRP	100	96.939	Colobus_angolensis_palliatus
ENSRROG00000036656	-	95	73.864	ENSCGRG00001024068	Slirp	83	71.739	Cricetulus_griseus_chok1gshd
ENSRROG00000036656	-	95	73.864	ENSCGRG00000017440	Slirp	83	71.739	Cricetulus_griseus_crigri
ENSRROG00000036656	-	92	48.837	ENSCSEG00000015766	slirp	75	54.054	Cynoglossus_semilaevis
ENSRROG00000036656	-	72	67.164	ENSCVAG00000012504	slirp	68	66.667	Cyprinodon_variegatus
ENSRROG00000036656	-	73	63.235	ENSDARG00000097753	slirp	72	63.514	Danio_rerio
ENSRROG00000036656	-	83	66.304	ENSDNOG00000007721	SLIRP	84	66.304	Dasypus_novemcinctus
ENSRROG00000036656	-	100	67.568	ENSDORG00000012379	Slirp	90	68.000	Dipodomys_ordii
ENSRROG00000036656	-	90	64.948	ENSETEG00000010345	SLIRP	100	66.667	Echinops_telfairi
ENSRROG00000036656	-	100	76.577	ENSEASG00005020193	SLIRP	90	75.000	Equus_asinus_asinus
ENSRROG00000036656	-	92	61.628	ENSEEUG00000007257	SLIRP	91	58.696	Erinaceus_europaeus
ENSRROG00000036656	-	70	61.538	ENSELUG00000016800	slirp	73	59.459	Esox_lucius
ENSRROG00000036656	-	97	80.000	ENSFCAG00000036326	SLIRP	87	76.744	Felis_catus
ENSRROG00000036656	-	72	56.716	ENSFALG00000012583	SLIRP	75	50.633	Ficedula_albicollis
ENSRROG00000036656	-	96	65.957	ENSFDAG00000008347	SLIRP	86	63.918	Fukomys_damarensis
ENSRROG00000036656	-	72	56.962	ENSFHEG00000004709	slirp	86	56.962	Fundulus_heteroclitus
ENSRROG00000036656	-	79	55.844	ENSGMOG00000016948	slirp	84	53.409	Gadus_morhua
ENSRROG00000036656	-	72	58.209	ENSGALG00000031238	SLIRP	78	57.692	Gallus_gallus
ENSRROG00000036656	-	75	65.714	ENSGAFG00000010998	slirp	89	59.551	Gambusia_affinis
ENSRROG00000036656	-	73	58.824	ENSGACG00000020137	slirp	83	57.746	Gasterosteus_aculeatus
ENSRROG00000036656	-	79	61.039	ENSGAGG00000009953	SLIRP	62	55.556	Gopherus_agassizii
ENSRROG00000036656	-	85	86.076	ENSGGOG00000011059	-	100	86.022	Gorilla_gorilla
ENSRROG00000036656	-	100	61.261	ENSHGLG00000018491	SLIRP	90	60.000	Heterocephalus_glaber_female
ENSRROG00000036656	-	100	61.261	ENSHGLG00100014153	SLIRP	90	60.000	Heterocephalus_glaber_male
ENSRROG00000036656	-	79	61.039	ENSHCOG00000006795	slirp	88	58.621	Hippocampus_comes
ENSRROG00000036656	-	80	54.023	ENSIPUG00000010214	SLIRP	87	54.023	Ictalurus_punctatus
ENSRROG00000036656	-	90	72.000	ENSSTOG00000034316	SLIRP	90	72.000	Ictidomys_tridecemlineatus
ENSRROG00000036656	-	79	49.351	ENSKMAG00000002038	slirp	88	46.739	Kryptolebias_marmoratus
ENSRROG00000036656	-	81	53.409	ENSLBEG00000007564	slirp	88	53.409	Labrus_bergylta
ENSRROG00000036656	-	81	54.444	ENSLACG00000013434	SLIRP	86	55.056	Latimeria_chalumnae
ENSRROG00000036656	-	90	96.040	ENSMFAG00000042960	SLIRP	100	95.918	Macaca_fascicularis
ENSRROG00000036656	-	100	96.939	ENSMMUG00000029256	SLIRP	100	96.939	Macaca_mulatta
ENSRROG00000036656	-	90	96.040	ENSMNEG00000028921	SLIRP	100	95.918	Macaca_nemestrina
ENSRROG00000036656	-	100	95.918	ENSMLEG00000043644	SLIRP	89	96.552	Mandrillus_leucophaeus
ENSRROG00000036656	-	81	56.818	ENSMZEG00005004617	slirp	89	56.818	Maylandia_zebra
ENSRROG00000036656	-	100	68.468	ENSMAUG00000003857	Slirp	83	73.913	Mesocricetus_auratus
ENSRROG00000036656	-	100	70.940	ENSMICG00000012080	SLIRP	91	71.698	Microcebus_murinus
ENSRROG00000036656	-	95	73.864	ENSMOCG00000016019	Slirp	79	78.652	Microtus_ochrogaster
ENSRROG00000036656	-	81	52.273	ENSMMOG00000018268	slirp	88	52.273	Mola_mola
ENSRROG00000036656	-	74	60.870	ENSMODG00000005207	-	100	60.563	Monodelphis_domestica
ENSRROG00000036656	-	80	57.471	ENSMALG00000012581	slirp	89	57.471	Monopterus_albus
ENSRROG00000036656	-	95	76.136	MGP_CAROLIEiJ_G0017995	Slirp	90	73.196	Mus_caroli
ENSRROG00000036656	-	95	77.273	ENSMUSG00000021040	Slirp	87	74.227	Mus_musculus
ENSRROG00000036656	-	95	77.273	MGP_SPRETEiJ_G0018840	Slirp	87	74.227	Mus_spretus
ENSRROG00000036656	-	90	68.000	ENSMLUG00000029544	-	100	68.468	Myotis_lucifugus
ENSRROG00000036656	-	84	71.277	ENSMLUG00000024998	-	100	69.369	Myotis_lucifugus
ENSRROG00000036656	-	97	68.519	ENSNGAG00000016363	Slirp	86	75.281	Nannospalax_galili
ENSRROG00000036656	-	93	76.238	ENSNLEG00000027238	-	94	76.531	Nomascus_leucogenys
ENSRROG00000036656	-	99	83.696	ENSNLEG00000032459	-	87	82.716	Nomascus_leucogenys
ENSRROG00000036656	-	96	78.652	ENSODEG00000012580	SLIRP	87	78.750	Octodon_degus
ENSRROG00000036656	-	72	62.687	ENSONIG00000011692	slirp	75	62.162	Oreochromis_niloticus
ENSRROG00000036656	-	95	59.091	ENSOANG00000022366	SLIRP	66	69.863	Ornithorhynchus_anatinus
ENSRROG00000036656	-	81	54.545	ENSORLG00000010761	slirp	68	54.545	Oryzias_latipes
ENSRROG00000036656	-	81	55.682	ENSORLG00020022188	slirp	88	55.682	Oryzias_latipes_hni
ENSRROG00000036656	-	100	48.624	ENSORLG00015020171	slirp	87	54.545	Oryzias_latipes_hsok
ENSRROG00000036656	-	81	55.682	ENSOMEG00000019321	slirp	88	55.682	Oryzias_melastigma
ENSRROG00000036656	-	85	86.076	ENSPPAG00000040710	-	100	86.022	Pan_paniscus
ENSRROG00000036656	-	99	78.351	ENSPPRG00000014350	SLIRP	87	77.907	Panthera_pardus
ENSRROG00000036656	-	99	78.351	ENSPTIG00000014196	SLIRP	87	77.907	Panthera_tigris_altaica
ENSRROG00000036656	-	85	86.076	ENSPTRG00000030691	SLIRP	100	86.022	Pan_troglodytes
ENSRROG00000036656	-	100	96.939	ENSPANG00000026323	SLIRP	100	96.939	Papio_anubis
ENSRROG00000036656	-	62	58.621	ENSPKIG00000008831	slirp	66	56.716	Paramormyrops_kingsleyae
ENSRROG00000036656	-	72	68.657	ENSPMGG00000010541	slirp	79	68.116	Periophthalmus_magnuspinnatus
ENSRROG00000036656	-	83	74.026	ENSPEMG00000013234	Slirp	96	67.890	Peromyscus_maniculatus_bairdii
ENSRROG00000036656	-	65	53.333	ENSPMAG00000009355	slirp	76	50.000	Petromyzon_marinus
ENSRROG00000036656	-	75	61.429	ENSPCIG00000026842	-	77	61.111	Phascolarctos_cinereus
ENSRROG00000036656	-	81	56.818	ENSPFOG00000006758	slirp	88	56.818	Poecilia_formosa
ENSRROG00000036656	-	81	57.955	ENSPLAG00000011140	slirp	88	57.955	Poecilia_latipinna
ENSRROG00000036656	-	81	56.818	ENSPMEG00000019535	slirp	88	56.818	Poecilia_mexicana
ENSRROG00000036656	-	81	56.818	ENSPREG00000011673	slirp	88	56.818	Poecilia_reticulata
ENSRROG00000036656	-	88	77.895	ENSPPYG00000006030	SLIRP	97	79.245	Pongo_abelii
ENSRROG00000036656	-	100	70.270	ENSPCOG00000015159	SLIRP	90	71.000	Propithecus_coquereli
ENSRROG00000036656	-	80	60.920	ENSPNAG00000008633	slirp	88	60.920	Pygocentrus_nattereri
ENSRROG00000036656	-	88	90.805	ENSRBIG00000032998	-	81	96.591	Rhinopithecus_bieti
ENSRROG00000036656	-	92	97.674	ENSRBIG00000031396	-	86	97.674	Rhinopithecus_bieti
ENSRROG00000036656	-	98	92.453	ENSRBIG00000035817	-	100	92.453	Rhinopithecus_bieti
ENSRROG00000036656	-	100	99.107	ENSRBIG00000032222	-	100	99.107	Rhinopithecus_bieti
ENSRROG00000036656	-	99	84.783	ENSSBOG00000020014	SLIRP	87	86.420	Saimiri_boliviensis_boliviensis
ENSRROG00000036656	-	72	61.194	ENSSFOG00015011165	slirp	78	55.844	Scleropages_formosus
ENSRROG00000036656	-	71	48.485	ENSSMAG00000012930	slirp	73	48.649	Scophthalmus_maximus
ENSRROG00000036656	-	72	64.179	ENSSLDG00000023136	slirp	67	63.514	Seriola_lalandi_dorsalis
ENSRROG00000036656	-	86	59.259	ENSSPUG00000009346	SLIRP	86	53.571	Sphenodon_punctatus
ENSRROG00000036656	-	72	56.716	ENSSPAG00000013477	slirp	74	55.405	Stegastes_partitus
ENSRROG00000036656	-	100	70.270	ENSSSCG00000028167	SLIRP	90	70.000	Sus_scrofa
ENSRROG00000036656	-	72	58.209	ENSTGUG00000012337	SLIRP	78	51.807	Taeniopygia_guttata
ENSRROG00000036656	-	72	55.882	ENSTRUG00000020127	slirp	74	56.000	Takifugu_rubripes
ENSRROG00000036656	-	100	75.676	ENSUAMG00000022445	SLIRP	90	74.000	Ursus_americanus
ENSRROG00000036656	-	100	76.577	ENSUMAG00000007166	SLIRP	90	75.000	Ursus_maritimus
ENSRROG00000036656	-	100	71.296	ENSVPAG00000001781	SLIRP	90	71.134	Vicugna_pacos
ENSRROG00000036656	-	83	79.221	ENSVVUG00000004436	SLIRP	100	74.775	Vulpes_vulpes
ENSRROG00000036656	-	72	64.179	ENSXETG00000030343	SLIRP	79	64.286	Xenopus_tropicalis
ENSRROG00000036656	-	81	57.955	ENSXCOG00000009422	slirp	88	57.955	Xiphophorus_couchianus
ENSRROG00000036656	-	81	59.091	ENSXMAG00000015655	slirp	88	59.091	Xiphophorus_maculatus