EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000036885 (Gene tree)
Gene ID: 104663509
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 4668 bases
Position: chrKN295814.1:1212489-1217156
Accession: 104663509
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000026287	MMR_HSR1	PF01926.23	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000050526	-	375	-	ENSRROP00000026292	124 (aa)	-	A0A2K6QBX9
ENSRROT00000050524	-	1316	XM_010364735	ENSRROP00000026290	122 (aa)	XP_010363037	A0A2K6QBX6
ENSRROT00000050521	-	1193	XM_010364733	ENSRROP00000026287	203 (aa)	XP_010363035	A0A2K6QBX1

Gene Model

Click here to download ENSRROG00000036885's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000036885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000036885	-	79	37.423	ENSRROG00000029485	MRAS	78	37.423
ENSRROG00000036885	-	78	42.405	ENSRROG00000030454	RAB6B	76	42.405
ENSRROG00000036885	-	84	51.744	ENSRROG00000019249	RAB12	72	51.744
ENSRROG00000036885	-	86	46.629	ENSRROG00000000340	RAB39B	84	46.629
ENSRROG00000036885	-	68	53.623	ENSRROG00000030997	RAB3C	84	53.623
ENSRROG00000036885	-	95	36.458	ENSRROG00000037973	RAB5B	89	36.458
ENSRROG00000036885	-	87	42.781	ENSRROG00000029829	RAB33A	79	42.781
ENSRROG00000036885	-	84	53.529	ENSRROG00000042140	RAB15	94	57.143
ENSRROG00000036885	-	80	38.824	ENSRROG00000014546	RAB9A	83	38.824
ENSRROG00000036885	-	83	48.214	ENSRROG00000039326	RAB2B	81	48.214
ENSRROG00000036885	-	81	38.182	ENSRROG00000035920	RAB23	69	38.182
ENSRROG00000036885	-	78	30.189	ENSRROG00000031130	-	67	30.189
ENSRROG00000036885	-	85	42.197	ENSRROG00000028851	RAB25	81	42.197
ENSRROG00000036885	-	83	47.929	ENSRROG00000031181	RAB2A	80	47.929
ENSRROG00000036885	-	83	30.114	ENSRROG00000031027	-	90	30.818
ENSRROG00000036885	-	93	38.660	ENSRROG00000033951	RAB33B	76	41.379
ENSRROG00000036885	-	95	37.500	ENSRROG00000032895	RAB5C	89	37.500
ENSRROG00000036885	-	81	47.273	ENSRROG00000035305	RAB11A	76	47.273
ENSRROG00000036885	-	81	44.242	ENSRROG00000038344	RAB14	77	44.242
ENSRROG00000036885	-	91	42.424	ENSRROG00000037812	-	91	42.424
ENSRROG00000036885	-	58	33.058	ENSRROG00000028332	ARL14	60	33.058
ENSRROG00000036885	-	95	39.583	ENSRROG00000037687	RAB5A	89	39.583
ENSRROG00000036885	-	79	39.506	ENSRROG00000041325	HRAS	85	39.506
ENSRROG00000036885	-	80	40.476	ENSRROG00000025642	RAB9B	83	40.476
ENSRROG00000036885	-	80	33.333	ENSRROG00000044174	-	80	33.333
ENSRROG00000036885	-	91	36.702	ENSRROG00000043562	RAB22A	97	36.702
ENSRROG00000036885	-	91	54.348	ENSRROG00000030008	RAB1B	92	54.348
ENSRROG00000036885	-	80	49.383	ENSRROG00000031260	RAB30	80	49.383
ENSRROG00000036885	-	79	38.272	ENSRROG00000033256	NRAS	85	38.272
ENSRROG00000036885	-	80	38.323	ENSRROG00000032287	RAB7A	81	38.323
ENSRROG00000036885	-	62	31.429	ENSRROG00000010121	ARFRP1	67	31.429
ENSRROG00000036885	-	91	36.898	ENSRROG00000027824	RAB31	96	36.898
ENSRROG00000036885	-	91	36.757	ENSRROG00000040068	KRAS	98	37.436
ENSRROG00000036885	-	86	44.318	ENSRROG00000040563	RAB18	85	44.318
ENSRROG00000036885	-	84	39.011	ENSRROG00000004951	RAB34	70	39.011
ENSRROG00000036885	-	78	43.671	ENSRROG00000042103	RAB6A	76	43.671
ENSRROG00000036885	-	67	30.882	ENSRROG00000041157	ARF5	72	30.882
ENSRROG00000036885	-	83	35.632	ENSRROG00000042897	RERG	84	35.632

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000036885	-	100	99.507	ENSG00000143545	RAB13	100	99.507	Homo_sapiens
ENSRROG00000036885	-	99	75.622	ENSACIG00000008584	rab13	97	75.622	Amphilophus_citrinellus
ENSRROG00000036885	-	100	98.030	ENSANAG00000030247	-	100	98.030	Aotus_nancymaae
ENSRROG00000036885	-	99	79.208	ENSAMXG00000030712	rab13	99	79.208	Astyanax_mexicanus
ENSRROG00000036885	-	100	97.537	ENSBTAG00000017604	RAB13	100	97.537	Bos_taurus
ENSRROG00000036885	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSRROG00000036885	-	100	98.522	ENSCJAG00000009933	-	100	98.522	Callithrix_jacchus
ENSRROG00000036885	-	100	97.044	ENSCHIG00000022271	-	100	97.044	Capra_hircus
ENSRROG00000036885	-	99	90.594	ENSCPOG00000011491	-	99	90.594	Cavia_porcellus
ENSRROG00000036885	-	100	99.015	ENSCCAG00000028502	-	100	99.015	Cebus_capucinus
ENSRROG00000036885	-	100	99.507	ENSCATG00000041779	-	100	99.507	Cercocebus_atys
ENSRROG00000036885	-	100	90.640	ENSCLAG00000006603	-	100	90.640	Chinchilla_lanigera
ENSRROG00000036885	-	100	99.507	ENSCANG00000036573	-	100	99.507	Colobus_angolensis_palliatus
ENSRROG00000036885	-	100	95.074	ENSCGRG00001021505	Rab13	100	95.074	Cricetulus_griseus_chok1gshd
ENSRROG00000036885	-	100	95.074	ENSCGRG00000012126	Rab13	100	95.074	Cricetulus_griseus_crigri
ENSRROG00000036885	-	99	75.980	ENSCSEG00000002358	rab13	99	75.980	Cynoglossus_semilaevis
ENSRROG00000036885	-	99	78.218	ENSDARG00000034771	rab13	99	78.218	Danio_rerio
ENSRROG00000036885	-	100	94.089	ENSDORG00000001591	Rab13	100	94.089	Dipodomys_ordii
ENSRROG00000036885	-	100	98.030	ENSEASG00005000683	-	100	98.030	Equus_asinus_asinus
ENSRROG00000036885	-	100	98.030	ENSECAG00000016551	RAB13	100	98.030	Equus_caballus
ENSRROG00000036885	-	99	89.604	ENSEEUG00000001233	-	99	89.604	Erinaceus_europaeus
ENSRROG00000036885	-	99	76.733	ENSELUG00000012801	rab13	99	76.733	Esox_lucius
ENSRROG00000036885	-	100	92.118	ENSFCAG00000045269	-	100	92.118	Felis_catus
ENSRROG00000036885	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSRROG00000036885	-	99	75.743	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSRROG00000036885	-	99	76.238	ENSGACG00000011925	rab13	99	76.238	Gasterosteus_aculeatus
ENSRROG00000036885	-	85	90.751	ENSGAGG00000000742	-	99	81.281	Gopherus_agassizii
ENSRROG00000036885	-	100	99.507	ENSGGOG00000023693	RAB13	100	99.507	Gorilla_gorilla
ENSRROG00000036885	-	100	90.148	ENSHGLG00000008749	RAB13	100	90.148	Heterocephalus_glaber_female
ENSRROG00000036885	-	100	90.148	ENSHGLG00100013608	RAB13	100	90.148	Heterocephalus_glaber_male
ENSRROG00000036885	-	99	73.762	ENSHCOG00000007440	rab13	95	86.127	Hippocampus_comes
ENSRROG00000036885	-	99	77.000	ENSIPUG00000003199	rab13	99	77.000	Ictalurus_punctatus
ENSRROG00000036885	-	100	96.552	ENSSTOG00000011222	-	100	96.552	Ictidomys_tridecemlineatus
ENSRROG00000036885	-	100	92.611	ENSJJAG00000010575	Rab13	100	92.611	Jaculus_jaculus
ENSRROG00000036885	-	99	76.000	ENSKMAG00000001908	rab13	99	76.000	Kryptolebias_marmoratus
ENSRROG00000036885	-	99	77.000	ENSLBEG00000026779	rab13	99	77.000	Labrus_bergylta
ENSRROG00000036885	-	85	77.907	ENSLACG00000008103	-	97	77.907	Latimeria_chalumnae
ENSRROG00000036885	-	100	99.507	ENSMFAG00000041018	RAB13	100	99.507	Macaca_fascicularis
ENSRROG00000036885	-	100	99.507	ENSMNEG00000028951	-	100	99.507	Macaca_nemestrina
ENSRROG00000036885	-	100	99.507	ENSMLEG00000042247	-	100	99.507	Mandrillus_leucophaeus
ENSRROG00000036885	-	99	75.248	ENSMAMG00000014602	rab13	99	75.248	Mastacembelus_armatus
ENSRROG00000036885	-	100	94.089	ENSMAUG00000015713	Rab13	100	94.089	Mesocricetus_auratus
ENSRROG00000036885	-	100	96.552	ENSMICG00000010340	-	100	96.552	Microcebus_murinus
ENSRROG00000036885	-	100	95.074	ENSMOCG00000021448	Rab13	100	95.074	Microtus_ochrogaster
ENSRROG00000036885	-	99	92.574	ENSMODG00000017295	-	84	92.574	Monodelphis_domestica
ENSRROG00000036885	-	100	92.118	MGP_CAROLIEiJ_G0025227	Rab13	100	92.118	Mus_caroli
ENSRROG00000036885	-	100	91.626	ENSMUSG00000027935	Rab13	100	91.626	Mus_musculus
ENSRROG00000036885	-	99	91.584	MGP_PahariEiJ_G0026671	Rab13	99	91.584	Mus_pahari
ENSRROG00000036885	-	100	95.074	ENSNGAG00000010309	Rab13	100	95.074	Nannospalax_galili
ENSRROG00000036885	-	99	75.248	ENSNBRG00000004124	rab13	99	75.248	Neolamprologus_brichardi
ENSRROG00000036885	-	100	99.507	ENSNLEG00000028944	-	100	99.507	Nomascus_leucogenys
ENSRROG00000036885	-	100	92.157	ENSMEUG00000009667	-	100	92.157	Notamacropus_eugenii
ENSRROG00000036885	-	100	89.163	ENSODEG00000010443	-	100	89.163	Octodon_degus
ENSRROG00000036885	-	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSRROG00000036885	-	99	75.743	ENSONIG00000006340	rab13	99	75.743	Oreochromis_niloticus
ENSRROG00000036885	-	88	96.067	ENSOCUG00000006286	-	100	96.067	Oryctolagus_cuniculus
ENSRROG00000036885	-	99	76.238	ENSOMEG00000008210	rab13	99	76.238	Oryzias_melastigma
ENSRROG00000036885	-	99	93.564	ENSOGAG00000016969	-	99	93.564	Otolemur_garnettii
ENSRROG00000036885	-	100	99.507	ENSPPAG00000028435	-	100	99.507	Pan_paniscus
ENSRROG00000036885	-	100	92.118	ENSPPRG00000008865	-	100	92.118	Panthera_pardus
ENSRROG00000036885	-	100	99.507	ENSPTRG00000001370	RAB13	100	99.507	Pan_troglodytes
ENSRROG00000036885	-	100	99.507	ENSPANG00000004479	-	100	99.507	Papio_anubis
ENSRROG00000036885	-	99	75.743	ENSPMGG00000007680	rab13	99	75.743	Periophthalmus_magnuspinnatus
ENSRROG00000036885	-	53	97.222	ENSPEMG00000017353	-	81	97.222	Peromyscus_maniculatus_bairdii
ENSRROG00000036885	-	100	92.647	ENSPCIG00000029350	-	100	92.647	Phascolarctos_cinereus
ENSRROG00000036885	-	95	74.112	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSRROG00000036885	-	90	80.328	ENSPREG00000017567	rab13	99	74.257	Poecilia_reticulata
ENSRROG00000036885	-	100	99.507	ENSPPYG00000000790	-	100	99.507	Pongo_abelii
ENSRROG00000036885	-	100	97.537	ENSPCOG00000012189	-	100	97.537	Propithecus_coquereli
ENSRROG00000036885	-	100	94.581	ENSPVAG00000011095	-	100	94.581	Pteropus_vampyrus
ENSRROG00000036885	-	85	86.127	ENSPNAG00000004189	rab13	92	86.127	Pygocentrus_nattereri
ENSRROG00000036885	-	100	92.118	ENSRNOG00000016733	Rab13	100	92.118	Rattus_norvegicus
ENSRROG00000036885	-	100	100.000	ENSRBIG00000008552	-	100	100.000	Rhinopithecus_bieti
ENSRROG00000036885	-	100	98.522	ENSSBOG00000020342	-	100	98.522	Saimiri_boliviensis_boliviensis
ENSRROG00000036885	-	100	91.667	ENSSHAG00000011866	-	100	91.667	Sarcophilus_harrisii
ENSRROG00000036885	-	100	98.030	ENSSSCG00000006564	-	100	98.030	Sus_scrofa
ENSRROG00000036885	-	99	76.733	ENSTRUG00000024177	rab13	99	76.733	Takifugu_rubripes
ENSRROG00000036885	-	100	96.552	ENSTBEG00000012734	-	100	96.552	Tupaia_belangeri
ENSRROG00000036885	-	100	99.015	ENSTTRG00000011183	-	100	99.015	Tursiops_truncatus
ENSRROG00000036885	-	71	81.944	ENSXETG00000020729	rab13	99	78.882	Xenopus_tropicalis
ENSRROG00000036885	-	85	82.659	ENSXCOG00000019533	rab13	93	82.659	Xiphophorus_couchianus