EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000037871 (Gene tree)
Gene ID: 104679272
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 106068 bases
Position: chrKN298811.1:241609-347676
Accession: 104679272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000028177	HRDC	PF00570.23	9.9e-12	1	1
ENSRROP00000028179	BDHCT	PF08072.11	1.6e-20	1	1
ENSRROP00000028177	BDHCT	PF08072.11	1.9e-20	1	1
ENSRROP00000028180	DEAD	PF00270.29	4.8e-20	1	1
ENSRROP00000028177	DEAD	PF00270.29	2.7e-19	1	1
ENSRROP00000028179	DEAD	PF00270.29	2.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000052521	BLM-202	4149	XM_010384793	ENSRROP00000028179	1285 (aa)	XP_010383095	A0A2K6QHE1
ENSRROT00000052522	BLM-203	1215	-	ENSRROP00000028180	404 (aa)	-	A0A2K6QHB6
ENSRROT00000052519	BLM-201	4542	XM_010384791	ENSRROP00000028177	1416 (aa)	XP_010383093	A0A2K6QHD3

Gene Model

Click here to download ENSRROG00000037871's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03440	Homologous recombination	KEGG
rro03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000037871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000037871	BLM	72	40.264	ENSRROG00000043301	RECQL5	90	42.025
ENSRROG00000037871	BLM	71	42.361	ENSRROG00000010234	RECQL	81	38.225

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000037871	BLM	100	95.210	ENSG00000197299	BLM	100	95.210	Homo_sapiens
ENSRROG00000037871	BLM	76	76.221	ENSAPOG00000017966	blm	59	65.140	Acanthochromis_polyacanthus
ENSRROG00000037871	BLM	92	93.531	ENSAMEG00000013843	BLM	100	80.520	Ailuropoda_melanoleuca
ENSRROG00000037871	BLM	76	75.896	ENSACIG00000023762	blm	56	64.796	Amphilophus_citrinellus
ENSRROG00000037871	BLM	76	75.570	ENSAOCG00000003318	blm	57	65.272	Amphiprion_ocellaris
ENSRROG00000037871	BLM	76	75.244	ENSAPEG00000018105	blm	56	65.272	Amphiprion_percula
ENSRROG00000037871	BLM	82	73.878	ENSATEG00000006421	blm	84	66.203	Anabas_testudineus
ENSRROG00000037871	BLM	91	71.816	ENSAPLG00000006878	BLM	98	58.522	Anas_platyrhynchos
ENSRROG00000037871	BLM	76	81.433	ENSACAG00000014275	BLM	78	55.882	Anolis_carolinensis
ENSRROG00000037871	BLM	100	92.025	ENSANAG00000038415	BLM	100	92.167	Aotus_nancymaae
ENSRROG00000037871	BLM	90	68.407	ENSACLG00000020354	blm	59	62.648	Astatotilapia_calliptera
ENSRROG00000037871	BLM	92	68.365	ENSAMXG00000016970	blm	75	54.083	Astyanax_mexicanus
ENSRROG00000037871	BLM	92	92.453	ENSBTAG00000020301	BLM	100	84.385	Bos_taurus
ENSRROG00000037871	BLM	70	51.930	WBGene00001865	him-6	66	40.653	Caenorhabditis_elegans
ENSRROG00000037871	BLM	100	91.602	ENSCJAG00000009803	BLM	100	91.743	Callithrix_jacchus
ENSRROG00000037871	BLM	92	93.531	ENSCAFG00000012385	BLM	100	81.453	Canis_familiaris
ENSRROG00000037871	BLM	92	93.531	ENSCAFG00020016111	BLM	94	91.108	Canis_lupus_dingo
ENSRROG00000037871	BLM	92	91.914	ENSCHIG00000010329	BLM	100	82.392	Capra_hircus
ENSRROG00000037871	BLM	100	85.976	ENSTSYG00000012368	BLM	100	85.976	Carlito_syrichta
ENSRROG00000037871	BLM	92	82.527	ENSCAPG00000017976	BLM	99	85.260	Cavia_aperea
ENSRROG00000037871	BLM	100	78.028	ENSCPOG00000001761	BLM	100	77.958	Cavia_porcellus
ENSRROG00000037871	BLM	100	91.108	ENSCCAG00000023069	BLM	100	91.249	Cebus_capucinus
ENSRROG00000037871	BLM	100	97.605	ENSCATG00000040609	BLM	100	97.605	Cercocebus_atys
ENSRROG00000037871	BLM	100	79.521	ENSCLAG00000012111	BLM	100	79.451	Chinchilla_lanigera
ENSRROG00000037871	BLM	100	97.605	ENSCSAG00000017040	BLM	100	96.840	Chlorocebus_sabaeus
ENSRROG00000037871	BLM	87	93.798	ENSCHOG00000006255	BLM	80	93.798	Choloepus_hoffmanni
ENSRROG00000037871	BLM	91	70.845	ENSCPBG00000025000	BLM	97	73.925	Chrysemys_picta_bellii
ENSRROG00000037871	BLM	74	40.397	ENSCING00000021036	-	81	42.140	Ciona_intestinalis
ENSRROG00000037871	BLM	74	40.134	ENSCSAVG00000007521	-	89	37.179	Ciona_savignyi
ENSRROG00000037871	BLM	87	99.444	ENSCANG00000034808	BLM	100	99.444	Colobus_angolensis_palliatus
ENSRROG00000037871	BLM	92	91.644	ENSCGRG00001024897	Blm	100	78.270	Cricetulus_griseus_chok1gshd
ENSRROG00000037871	BLM	92	91.153	ENSCGRG00000016261	Blm	97	73.723	Cricetulus_griseus_crigri
ENSRROG00000037871	BLM	91	66.213	ENSCSEG00000013483	blm	84	51.424	Cynoglossus_semilaevis
ENSRROG00000037871	BLM	82	73.566	ENSDARG00000077089	blm	56	65.322	Danio_rerio
ENSRROG00000037871	BLM	92	93.531	ENSDNOG00000010159	BLM	99	80.168	Dasypus_novemcinctus
ENSRROG00000037871	BLM	92	87.936	ENSDORG00000011033	Blm	100	80.383	Dipodomys_ordii
ENSRROG00000037871	BLM	72	54.110	FBgn0002906	Blm	50	40.252	Drosophila_melanogaster
ENSRROG00000037871	BLM	85	83.193	ENSETEG00000015019	BLM	77	83.193	Echinops_telfairi
ENSRROG00000037871	BLM	61	67.611	ENSEBUG00000015743	-	85	59.060	Eptatretus_burgeri
ENSRROG00000037871	BLM	100	81.030	ENSEASG00005006727	BLM	100	80.677	Equus_asinus_asinus
ENSRROG00000037871	BLM	92	93.801	ENSECAG00000011405	BLM	100	82.669	Equus_caballus
ENSRROG00000037871	BLM	92	92.992	ENSEEUG00000001434	BLM	98	74.296	Erinaceus_europaeus
ENSRROG00000037871	BLM	83	74.898	ENSELUG00000019098	blm	59	66.751	Esox_lucius
ENSRROG00000037871	BLM	92	94.340	ENSFCAG00000006087	BLM	100	80.352	Felis_catus
ENSRROG00000037871	BLM	77	78.275	ENSFALG00000010981	BLM	89	56.104	Ficedula_albicollis
ENSRROG00000037871	BLM	93	91.983	ENSFDAG00000012658	BLM	98	86.981	Fukomys_damarensis
ENSRROG00000037871	BLM	91	67.663	ENSFHEG00000002553	blm	79	51.127	Fundulus_heteroclitus
ENSRROG00000037871	BLM	75	50.993	ENSGMOG00000010772	-	96	50.820	Gadus_morhua
ENSRROG00000037871	BLM	75	55.298	ENSGMOG00000010827	-	97	55.059	Gadus_morhua
ENSRROG00000037871	BLM	74	49.342	ENSGMOG00000012988	-	99	48.718	Gadus_morhua
ENSRROG00000037871	BLM	83	71.458	ENSGMOG00000016431	blm	90	60.936	Gadus_morhua
ENSRROG00000037871	BLM	75	43.046	ENSGMOG00000013063	-	99	45.070	Gadus_morhua
ENSRROG00000037871	BLM	72	48.980	ENSGMOG00000010761	-	95	50.728	Gadus_morhua
ENSRROG00000037871	BLM	77	78.914	ENSGALG00000008256	BLM	84	56.680	Gallus_gallus
ENSRROG00000037871	BLM	75	75.082	ENSGAFG00000001117	blm	59	64.450	Gambusia_affinis
ENSRROG00000037871	BLM	76	76.547	ENSGACG00000010863	blm	100	73.157	Gasterosteus_aculeatus
ENSRROG00000037871	BLM	91	71.935	ENSGAGG00000005383	BLM	94	77.886	Gopherus_agassizii
ENSRROG00000037871	BLM	100	95.792	ENSGGOG00000007710	BLM	100	95.792	Gorilla_gorilla
ENSRROG00000037871	BLM	90	68.407	ENSHBUG00000015943	blm	60	62.884	Haplochromis_burtoni
ENSRROG00000037871	BLM	100	80.775	ENSHGLG00000013231	BLM	99	80.634	Heterocephalus_glaber_female
ENSRROG00000037871	BLM	91	69.126	ENSHCOG00000011455	blm	99	54.511	Hippocampus_comes
ENSRROG00000037871	BLM	77	77.097	ENSIPUG00000000529	blm	68	65.605	Ictalurus_punctatus
ENSRROG00000037871	BLM	92	91.105	ENSSTOG00000005000	BLM	100	81.857	Ictidomys_tridecemlineatus
ENSRROG00000037871	BLM	92	92.992	ENSJJAG00000016322	Blm	94	86.709	Jaculus_jaculus
ENSRROG00000037871	BLM	89	68.421	ENSKMAG00000016608	blm	79	51.565	Kryptolebias_marmoratus
ENSRROG00000037871	BLM	76	75.405	ENSLBEG00000018729	blm	61	93.103	Labrus_bergylta
ENSRROG00000037871	BLM	91	74.797	ENSLACG00000006490	BLM	99	51.648	Latimeria_chalumnae
ENSRROG00000037871	BLM	92	67.204	ENSLOCG00000014302	blm	90	62.016	Lepisosteus_oculatus
ENSRROG00000037871	BLM	100	97.246	ENSMFAG00000042982	BLM	100	97.246	Macaca_fascicularis
ENSRROG00000037871	BLM	100	97.316	ENSMMUG00000019526	BLM	100	97.316	Macaca_mulatta
ENSRROG00000037871	BLM	100	97.030	ENSMNEG00000031251	BLM	100	97.030	Macaca_nemestrina
ENSRROG00000037871	BLM	100	97.006	ENSMLEG00000032934	BLM	100	95.127	Mandrillus_leucophaeus
ENSRROG00000037871	BLM	90	69.146	ENSMAMG00000008726	blm	65	66.289	Mastacembelus_armatus
ENSRROG00000037871	BLM	90	68.407	ENSMZEG00005022323	blm	64	62.515	Maylandia_zebra
ENSRROG00000037871	BLM	92	91.644	ENSMAUG00000008953	Blm	99	78.230	Mesocricetus_auratus
ENSRROG00000037871	BLM	100	86.690	ENSMICG00000034442	BLM	100	86.700	Microcebus_murinus
ENSRROG00000037871	BLM	92	89.757	ENSMOCG00000016367	Blm	99	76.214	Microtus_ochrogaster
ENSRROG00000037871	BLM	91	66.667	ENSMMOG00000006959	blm	60	61.983	Mola_mola
ENSRROG00000037871	BLM	92	85.946	ENSMODG00000019449	BLM	99	64.646	Monodelphis_domestica
ENSRROG00000037871	BLM	91	68.392	ENSMALG00000007323	blm	60	62.911	Monopterus_albus
ENSRROG00000037871	BLM	92	90.027	MGP_CAROLIEiJ_G0029907	Blm	100	74.350	Mus_caroli
ENSRROG00000037871	BLM	92	90.836	ENSMUSG00000030528	Blm	100	74.825	Mus_musculus
ENSRROG00000037871	BLM	92	91.105	MGP_PahariEiJ_G0013129	Blm	100	75.264	Mus_pahari
ENSRROG00000037871	BLM	92	90.836	MGP_SPRETEiJ_G0031009	Blm	100	75.105	Mus_spretus
ENSRROG00000037871	BLM	92	92.183	ENSMPUG00000015657	BLM	99	79.950	Mustela_putorius_furo
ENSRROG00000037871	BLM	92	90.296	ENSMLUG00000014697	BLM	100	79.213	Myotis_lucifugus
ENSRROG00000037871	BLM	92	93.261	ENSNGAG00000001275	Blm	100	79.211	Nannospalax_galili
ENSRROG00000037871	BLM	83	74.538	ENSNBRG00000019702	blm	56	65.522	Neolamprologus_brichardi
ENSRROG00000037871	BLM	100	93.578	ENSNLEG00000012087	BLM	100	93.578	Nomascus_leucogenys
ENSRROG00000037871	BLM	92	70.541	ENSMEUG00000007253	BLM	99	60.867	Notamacropus_eugenii
ENSRROG00000037871	BLM	95	93.056	ENSOPRG00000011667	BLM	95	85.477	Ochotona_princeps
ENSRROG00000037871	BLM	92	84.906	ENSODEG00000015373	BLM	100	78.119	Octodon_degus
ENSRROG00000037871	BLM	72	93.426	ENSOANG00000009316	-	99	82.161	Ornithorhynchus_anatinus
ENSRROG00000037871	BLM	92	90.027	ENSOCUG00000013969	BLM	99	74.700	Oryctolagus_cuniculus
ENSRROG00000037871	BLM	83	73.265	ENSORLG00000008110	blm	65	65.987	Oryzias_latipes
ENSRROG00000037871	BLM	83	73.265	ENSORLG00020004812	blm	65	65.987	Oryzias_latipes_hni
ENSRROG00000037871	BLM	76	76.547	ENSORLG00015018640	blm	79	66.071	Oryzias_latipes_hsok
ENSRROG00000037871	BLM	92	91.914	ENSOGAG00000005708	BLM	100	79.155	Otolemur_garnettii
ENSRROG00000037871	BLM	92	91.914	ENSOARG00000012875	BLM	100	79.749	Ovis_aries
ENSRROG00000037871	BLM	100	95.210	ENSPPAG00000032173	BLM	100	95.210	Pan_paniscus
ENSRROG00000037871	BLM	92	93.801	ENSPPRG00000002471	BLM	100	80.493	Panthera_pardus
ENSRROG00000037871	BLM	92	93.531	ENSPTIG00000016168	BLM	100	80.169	Panthera_tigris_altaica
ENSRROG00000037871	BLM	100	94.637	ENSPTRG00000007460	BLM	100	94.707	Pan_troglodytes
ENSRROG00000037871	BLM	100	98.204	ENSPANG00000018572	BLM	100	98.204	Papio_anubis
ENSRROG00000037871	BLM	90	67.945	ENSPKIG00000008954	blm	70	62.338	Paramormyrops_kingsleyae
ENSRROG00000037871	BLM	52	78.302	ENSPSIG00000009792	BLM	99	77.321	Pelodiscus_sinensis
ENSRROG00000037871	BLM	78	73.885	ENSPMGG00000006629	blm	80	66.712	Periophthalmus_magnuspinnatus
ENSRROG00000037871	BLM	92	90.836	ENSPEMG00000017348	Blm	100	76.864	Peromyscus_maniculatus_bairdii
ENSRROG00000037871	BLM	89	62.881	ENSPMAG00000000445	blm	96	59.777	Petromyzon_marinus
ENSRROG00000037871	BLM	92	84.324	ENSPCIG00000006609	BLM	99	63.828	Phascolarctos_cinereus
ENSRROG00000037871	BLM	75	75.738	ENSPFOG00000005059	blm	78	51.742	Poecilia_formosa
ENSRROG00000037871	BLM	75	75.738	ENSPLAG00000017344	blm	59	64.533	Poecilia_latipinna
ENSRROG00000037871	BLM	75	75.738	ENSPMEG00000000321	blm	59	64.789	Poecilia_mexicana
ENSRROG00000037871	BLM	75	75.082	ENSPREG00000007715	blm	50	72.746	Poecilia_reticulata
ENSRROG00000037871	BLM	100	94.012	ENSPPYG00000006784	BLM	100	92.802	Pongo_abelii
ENSRROG00000037871	BLM	92	88.679	ENSPCAG00000008960	BLM	73	90.909	Procavia_capensis
ENSRROG00000037871	BLM	92	93.261	ENSPCOG00000000439	BLM	100	83.234	Propithecus_coquereli
ENSRROG00000037871	BLM	81	94.888	ENSPVAG00000011642	BLM	88	94.888	Pteropus_vampyrus
ENSRROG00000037871	BLM	90	42.308	ENSPNYG00000010956	blm	57	51.246	Pundamilia_nyererei
ENSRROG00000037871	BLM	89	71.588	ENSPNAG00000011714	blm	79	53.066	Pygocentrus_nattereri
ENSRROG00000037871	BLM	92	90.027	ENSRNOG00000011213	Blm	100	74.173	Rattus_norvegicus
ENSRROG00000037871	BLM	100	100.000	ENSRBIG00000029656	BLM	100	100.000	Rhinopithecus_bieti
ENSRROG00000037871	BLM	100	90.980	ENSSBOG00000030957	BLM	100	91.459	Saimiri_boliviensis_boliviensis
ENSRROG00000037871	BLM	91	83.924	ENSSHAG00000007988	BLM	99	64.325	Sarcophilus_harrisii
ENSRROG00000037871	BLM	75	77.409	ENSSFOG00015015462	blm	63	64.496	Scleropages_formosus
ENSRROG00000037871	BLM	76	75.244	ENSSMAG00000001120	blm	84	65.443	Scophthalmus_maximus
ENSRROG00000037871	BLM	91	67.760	ENSSLDG00000000634	blm	84	49.798	Seriola_lalandi_dorsalis
ENSRROG00000037871	BLM	92	90.027	ENSSARG00000006398	BLM	99	70.143	Sorex_araneus
ENSRROG00000037871	BLM	91	66.576	ENSSPUG00000000013	BLM	95	56.646	Sphenodon_punctatus
ENSRROG00000037871	BLM	76	75.570	ENSSPAG00000013999	blm	56	65.448	Stegastes_partitus
ENSRROG00000037871	BLM	92	92.992	ENSSSCG00000001816	BLM	99	82.010	Sus_scrofa
ENSRROG00000037871	BLM	77	80.192	ENSTGUG00000009959	-	99	51.253	Taeniopygia_guttata
ENSRROG00000037871	BLM	76	74.919	ENSTRUG00000019860	blm	57	64.422	Takifugu_rubripes
ENSRROG00000037871	BLM	77	74.359	ENSTNIG00000019246	blm	66	64.676	Tetraodon_nigroviridis
ENSRROG00000037871	BLM	77	90.043	ENSTBEG00000006706	BLM	81	83.932	Tupaia_belangeri
ENSRROG00000037871	BLM	92	93.011	ENSTTRG00000016386	BLM	100	83.310	Tursiops_truncatus
ENSRROG00000037871	BLM	92	94.879	ENSUMAG00000009105	BLM	97	91.655	Ursus_maritimus
ENSRROG00000037871	BLM	92	94.070	ENSVPAG00000000085	BLM	99	79.845	Vicugna_pacos
ENSRROG00000037871	BLM	95	93.779	ENSVVUG00000006402	BLM	100	80.280	Vulpes_vulpes
ENSRROG00000037871	BLM	74	85.667	ENSXETG00000007847	blm	54	72.201	Xenopus_tropicalis
ENSRROG00000037871	BLM	75	66.557	ENSXCOG00000020227	blm	59	61.716	Xiphophorus_couchianus
ENSRROG00000037871	BLM	75	74.426	ENSXMAG00000002951	blm	78	53.023	Xiphophorus_maculatus