EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000037952 (Gene tree)
Gene ID: 104661456
Gene Symbol: -
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 30848 bases
Position: chrKN295315.1:656198-687045
Accession: 104661456
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000028460	ResIII	PF04851.15	1.2e-25	1	2
ENSRROP00000028460	ResIII	PF04851.15	1.2e-25	2	2
ENSRROP00000028467	ResIII	PF04851.15	1.2e-25	1	2
ENSRROP00000028467	ResIII	PF04851.15	1.2e-25	2	2
ENSRROP00000028479	ResIII	PF04851.15	5.8e-12	1	1
ENSRROP00000028474	ResIII	PF04851.15	1.8e-10	1	1
ENSRROP00000028460	DEAD	PF00270.29	7.3e-52	1	2
ENSRROP00000028460	DEAD	PF00270.29	7.3e-52	2	2
ENSRROP00000028467	DEAD	PF00270.29	7.5e-52	1	2
ENSRROP00000028467	DEAD	PF00270.29	7.5e-52	2	2
ENSRROP00000028479	DEAD	PF00270.29	8.2e-25	1	1
ENSRROP00000028474	DEAD	PF00270.29	1.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000052829	-	2073	-	ENSRROP00000028474	690 (aa)	-	A0A2K6QI73
ENSRROT00000052822	-	6441	-	ENSRROP00000028467	2146 (aa)	-	A0A2K6QI65
ENSRROT00000052834	-	3162	-	ENSRROP00000028479	1053 (aa)	-	A0A2K6QI76
ENSRROT00000052813	-	7225	XM_010362077	ENSRROP00000028460	2136 (aa)	XP_010360379	A0A2K6QI64

Gene Model

Click here to download ENSRROG00000037952's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000037952's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000037952	-	86	44.618	ENSRROG00000045402	ASCC3	80	44.507
ENSRROG00000037952	-	75	32.112	ENSRROG00000045569	HFM1	58	32.112

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000037952	-	100	100.000	ENSG00000144028	SNRNP200	100	100.000	Homo_sapiens
ENSRROG00000037952	-	99	90.888	ENSAPOG00000010223	snrnp200	99	90.777	Acanthochromis_polyacanthus
ENSRROG00000037952	-	100	99.860	ENSAMEG00000008996	SNRNP200	100	99.860	Ailuropoda_melanoleuca
ENSRROG00000037952	-	97	90.257	ENSACIG00000001764	snrnp200	98	90.257	Amphilophus_citrinellus
ENSRROG00000037952	-	99	90.794	ENSAOCG00000024593	snrnp200	100	90.043	Amphiprion_ocellaris
ENSRROG00000037952	-	97	90.096	ENSAPEG00000012554	snrnp200	100	90.096	Amphiprion_percula
ENSRROG00000037952	-	99	90.653	ENSATEG00000022522	snrnp200	99	90.543	Anabas_testudineus
ENSRROG00000037952	-	99	97.690	ENSAPLG00000004313	SNRNP200	100	97.690	Anas_platyrhynchos
ENSRROG00000037952	-	99	97.497	ENSACAG00000000434	SNRNP200	100	97.497	Anolis_carolinensis
ENSRROG00000037952	-	100	95.429	ENSANAG00000036625	SNRNP200	100	95.849	Aotus_nancymaae
ENSRROG00000037952	-	99	90.512	ENSACLG00000011188	snrnp200	99	90.403	Astatotilapia_calliptera
ENSRROG00000037952	-	99	90.606	ENSAMXG00000005684	snrnp200	99	90.496	Astyanax_mexicanus
ENSRROG00000037952	-	100	99.298	ENSBTAG00000000848	SNRNP200	100	99.298	Bos_taurus
ENSRROG00000037952	-	100	100.000	ENSCJAG00000007514	SNRNP200	100	100.000	Callithrix_jacchus
ENSRROG00000037952	-	100	100.000	ENSCAFG00020019979	SNRNP200	100	100.000	Canis_lupus_dingo
ENSRROG00000037952	-	100	99.485	ENSCHIG00000020611	SNRNP200	100	99.485	Capra_hircus
ENSRROG00000037952	-	100	100.000	ENSTSYG00000010467	SNRNP200	100	100.000	Carlito_syrichta
ENSRROG00000037952	-	99	99.436	ENSCAPG00000017234	SNRNP200	99	99.436	Cavia_aperea
ENSRROG00000037952	-	100	99.719	ENSCPOG00000006776	SNRNP200	100	99.719	Cavia_porcellus
ENSRROG00000037952	-	100	100.000	ENSCCAG00000033962	SNRNP200	100	100.000	Cebus_capucinus
ENSRROG00000037952	-	100	100.000	ENSCATG00000015790	SNRNP200	100	100.000	Cercocebus_atys
ENSRROG00000037952	-	100	99.579	ENSCLAG00000004116	SNRNP200	100	99.579	Chinchilla_lanigera
ENSRROG00000037952	-	100	99.953	ENSCSAG00000017369	SNRNP200	100	99.953	Chlorocebus_sabaeus
ENSRROG00000037952	-	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSRROG00000037952	-	100	97.756	ENSCPBG00000022571	SNRNP200	100	97.756	Chrysemys_picta_bellii
ENSRROG00000037952	-	99	76.600	ENSCING00000005082	-	99	76.740	Ciona_intestinalis
ENSRROG00000037952	-	100	94.489	ENSCANG00000033932	SNRNP200	100	99.950	Colobus_angolensis_palliatus
ENSRROG00000037952	-	100	99.766	ENSCGRG00001022610	Snrnp200	100	99.766	Cricetulus_griseus_chok1gshd
ENSRROG00000037952	-	100	99.205	ENSCGRG00000016472	Snrnp200	100	99.205	Cricetulus_griseus_crigri
ENSRROG00000037952	-	100	89.888	ENSCSEG00000016399	snrnp200	100	89.888	Cynoglossus_semilaevis
ENSRROG00000037952	-	100	85.627	ENSCVAG00000017631	snrnp200	99	85.627	Cyprinodon_variegatus
ENSRROG00000037952	-	100	90.356	ENSDARG00000077536	snrnp200	99	90.356	Danio_rerio
ENSRROG00000037952	-	100	98.784	ENSDNOG00000011227	SNRNP200	100	98.361	Dasypus_novemcinctus
ENSRROG00000037952	-	100	97.148	ENSDORG00000005861	Snrnp200	100	97.148	Dipodomys_ordii
ENSRROG00000037952	-	100	74.302	FBgn0263599	l(3)72Ab	99	74.209	Drosophila_melanogaster
ENSRROG00000037952	-	100	98.936	ENSETEG00000000162	SNRNP200	74	99.742	Echinops_telfairi
ENSRROG00000037952	-	83	81.256	ENSEBUG00000016524	snrnp200	95	81.256	Eptatretus_burgeri
ENSRROG00000037952	-	100	98.741	ENSEASG00005001884	SNRNP200	100	98.741	Equus_asinus_asinus
ENSRROG00000037952	-	100	99.860	ENSECAG00000019675	SNRNP200	100	99.860	Equus_caballus
ENSRROG00000037952	-	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSRROG00000037952	-	99	90.841	ENSELUG00000018948	snrnp200	99	90.730	Esox_lucius
ENSRROG00000037952	-	100	99.906	ENSFCAG00000010699	SNRNP200	100	99.906	Felis_catus
ENSRROG00000037952	-	94	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSRROG00000037952	-	100	99.625	ENSFDAG00000004683	SNRNP200	100	99.625	Fukomys_damarensis
ENSRROG00000037952	-	100	87.781	ENSFHEG00000003786	snrnp200	99	87.781	Fundulus_heteroclitus
ENSRROG00000037952	-	100	89.673	ENSGMOG00000004881	snrnp200	99	89.626	Gadus_morhua
ENSRROG00000037952	-	100	88.015	ENSGAFG00000010807	snrnp200	99	88.015	Gambusia_affinis
ENSRROG00000037952	-	100	90.005	ENSGACG00000011474	snrnp200	99	89.911	Gasterosteus_aculeatus
ENSRROG00000037952	-	95	97.686	ENSGAGG00000016069	SNRNP200	99	97.686	Gopherus_agassizii
ENSRROG00000037952	-	100	100.000	ENSGGOG00000005174	SNRNP200	100	100.000	Gorilla_gorilla
ENSRROG00000037952	-	97	87.780	ENSHBUG00000011322	snrnp200	99	87.827	Haplochromis_burtoni
ENSRROG00000037952	-	100	99.719	ENSHGLG00000006654	SNRNP200	100	99.719	Heterocephalus_glaber_female
ENSRROG00000037952	-	100	99.719	ENSHGLG00100018594	SNRNP200	100	99.719	Heterocephalus_glaber_male
ENSRROG00000037952	-	50	81.844	ENSIPUG00000007770	-	89	81.818	Ictalurus_punctatus
ENSRROG00000037952	-	100	99.860	ENSSTOG00000016351	SNRNP200	100	99.860	Ictidomys_tridecemlineatus
ENSRROG00000037952	-	100	99.672	ENSJJAG00000023659	Snrnp200	100	99.672	Jaculus_jaculus
ENSRROG00000037952	-	100	87.541	ENSKMAG00000003665	snrnp200	99	87.541	Kryptolebias_marmoratus
ENSRROG00000037952	-	100	90.262	ENSLBEG00000021585	snrnp200	99	90.262	Labrus_bergylta
ENSRROG00000037952	-	82	94.722	ENSLACG00000000226	SNRNP200	99	94.722	Latimeria_chalumnae
ENSRROG00000037952	-	100	92.182	ENSLOCG00000015198	snrnp200	99	92.182	Lepisosteus_oculatus
ENSRROG00000037952	-	100	99.485	ENSLAFG00000015626	SNRNP200	100	99.485	Loxodonta_africana
ENSRROG00000037952	-	100	100.000	ENSMFAG00000040174	SNRNP200	100	100.000	Macaca_fascicularis
ENSRROG00000037952	-	100	100.000	ENSMMUG00000023261	SNRNP200	100	100.000	Macaca_mulatta
ENSRROG00000037952	-	100	99.906	ENSMNEG00000032398	SNRNP200	100	99.906	Macaca_nemestrina
ENSRROG00000037952	-	100	100.000	ENSMLEG00000019083	SNRNP200	100	100.000	Mandrillus_leucophaeus
ENSRROG00000037952	-	100	90.220	ENSMAMG00000007851	snrnp200	99	90.173	Mastacembelus_armatus
ENSRROG00000037952	-	97	87.780	ENSMZEG00005010787	snrnp200	99	87.827	Maylandia_zebra
ENSRROG00000037952	-	97	97.242	ENSMGAG00000001831	SNRNP200	100	97.242	Meleagris_gallopavo
ENSRROG00000037952	-	100	99.813	ENSMAUG00000011825	Snrnp200	100	99.813	Mesocricetus_auratus
ENSRROG00000037952	-	100	99.860	ENSMICG00000004710	SNRNP200	100	99.860	Microcebus_murinus
ENSRROG00000037952	-	100	97.238	ENSMOCG00000011814	Snrnp200	100	97.238	Microtus_ochrogaster
ENSRROG00000037952	-	99	89.009	ENSMMOG00000014167	snrnp200	99	88.904	Mola_mola
ENSRROG00000037952	-	100	98.970	ENSMODG00000008475	SNRNP200	100	98.970	Monodelphis_domestica
ENSRROG00000037952	-	99	90.794	ENSMALG00000001973	snrnp200	99	90.684	Monopterus_albus
ENSRROG00000037952	-	100	99.625	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.625	Mus_caroli
ENSRROG00000037952	-	100	99.672	ENSMUSG00000003660	Snrnp200	100	99.672	Mus_musculus
ENSRROG00000037952	-	100	99.719	MGP_PahariEiJ_G0025695	Snrnp200	100	99.719	Mus_pahari
ENSRROG00000037952	-	100	99.672	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.724	Mus_spretus
ENSRROG00000037952	-	100	99.813	ENSMPUG00000008949	SNRNP200	100	99.813	Mustela_putorius_furo
ENSRROG00000037952	-	100	99.252	ENSMLUG00000010493	SNRNP200	100	99.252	Myotis_lucifugus
ENSRROG00000037952	-	100	95.552	ENSMLUG00000027511	-	100	95.552	Myotis_lucifugus
ENSRROG00000037952	-	100	99.906	ENSNGAG00000021993	Snrnp200	100	99.906	Nannospalax_galili
ENSRROG00000037952	-	90	90.319	ENSNBRG00000017960	snrnp200	98	90.319	Neolamprologus_brichardi
ENSRROG00000037952	-	100	98.632	ENSNLEG00000000025	SNRNP200	100	96.377	Nomascus_leucogenys
ENSRROG00000037952	-	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSRROG00000037952	-	100	95.974	ENSOPRG00000015464	SNRNP200	100	95.974	Ochotona_princeps
ENSRROG00000037952	-	100	99.579	ENSODEG00000008366	SNRNP200	100	99.579	Octodon_degus
ENSRROG00000037952	-	99	90.512	ENSONIG00000010714	snrnp200	99	90.403	Oreochromis_niloticus
ENSRROG00000037952	-	100	99.766	ENSOCUG00000009864	SNRNP200	100	99.766	Oryctolagus_cuniculus
ENSRROG00000037952	-	100	90.309	ENSORLG00000012286	snrnp200	100	90.309	Oryzias_latipes
ENSRROG00000037952	-	100	90.356	ENSORLG00020004648	snrnp200	100	90.356	Oryzias_latipes_hni
ENSRROG00000037952	-	100	90.309	ENSORLG00015019114	snrnp200	100	90.339	Oryzias_latipes_hsok
ENSRROG00000037952	-	99	90.559	ENSOMEG00000011834	snrnp200	99	90.449	Oryzias_melastigma
ENSRROG00000037952	-	100	99.906	ENSOGAG00000006879	SNRNP200	100	99.906	Otolemur_garnettii
ENSRROG00000037952	-	100	99.088	ENSOARG00000013949	SNRNP200	100	98.456	Ovis_aries
ENSRROG00000037952	-	100	100.000	ENSPPAG00000041559	SNRNP200	100	100.000	Pan_paniscus
ENSRROG00000037952	-	100	99.906	ENSPPRG00000004435	SNRNP200	100	99.906	Panthera_pardus
ENSRROG00000037952	-	100	99.438	ENSPTIG00000006380	SNRNP200	100	99.438	Panthera_tigris_altaica
ENSRROG00000037952	-	100	100.000	ENSPTRG00000012230	SNRNP200	100	100.000	Pan_troglodytes
ENSRROG00000037952	-	100	100.000	ENSPANG00000006017	SNRNP200	100	100.000	Papio_anubis
ENSRROG00000037952	-	100	91.105	ENSPKIG00000014762	snrnp200	99	91.105	Paramormyrops_kingsleyae
ENSRROG00000037952	-	100	97.269	ENSPSIG00000008580	SNRNP200	100	96.724	Pelodiscus_sinensis
ENSRROG00000037952	-	100	99.130	ENSPEMG00000020700	-	100	99.541	Peromyscus_maniculatus_bairdii
ENSRROG00000037952	-	100	98.970	ENSPCIG00000023050	SNRNP200	100	98.970	Phascolarctos_cinereus
ENSRROG00000037952	-	100	90.360	ENSPFOG00000015110	snrnp200	99	90.360	Poecilia_formosa
ENSRROG00000037952	-	97	90.220	ENSPLAG00000006711	snrnp200	99	90.220	Poecilia_latipinna
ENSRROG00000037952	-	97	90.165	ENSPMEG00000021166	snrnp200	99	90.165	Poecilia_mexicana
ENSRROG00000037952	-	100	90.449	ENSPREG00000008875	snrnp200	99	90.449	Poecilia_reticulata
ENSRROG00000037952	-	100	100.000	ENSPPYG00000012068	SNRNP200	100	100.000	Pongo_abelii
ENSRROG00000037952	-	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSRROG00000037952	-	100	99.906	ENSPCOG00000024608	SNRNP200	100	99.906	Propithecus_coquereli
ENSRROG00000037952	-	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSRROG00000037952	-	99	86.089	ENSPNYG00000017476	snrnp200	99	85.994	Pundamilia_nyererei
ENSRROG00000037952	-	100	86.096	ENSPNAG00000010998	snrnp200	99	86.096	Pygocentrus_nattereri
ENSRROG00000037952	-	100	99.813	ENSRNOG00000012157	Snrnp200	100	99.813	Rattus_norvegicus
ENSRROG00000037952	-	100	100.000	ENSRBIG00000044690	-	100	100.000	Rhinopithecus_bieti
ENSRROG00000037952	-	100	100.000	ENSSBOG00000035471	SNRNP200	100	100.000	Saimiri_boliviensis_boliviensis
ENSRROG00000037952	-	97	98.887	ENSSHAG00000000758	SNRNP200	100	98.887	Sarcophilus_harrisii
ENSRROG00000037952	-	99	91.639	ENSSFOG00015018826	snrnp200	99	91.526	Scleropages_formosus
ENSRROG00000037952	-	99	90.465	ENSSMAG00000005463	snrnp200	99	90.356	Scophthalmus_maximus
ENSRROG00000037952	-	99	90.747	ENSSDUG00000021410	snrnp200	99	90.637	Seriola_dumerili
ENSRROG00000037952	-	99	90.700	ENSSLDG00000010884	snrnp200	99	90.590	Seriola_lalandi_dorsalis
ENSRROG00000037952	-	95	99.196	ENSSARG00000010728	SNRNP200	96	99.196	Sorex_araneus
ENSRROG00000037952	-	100	97.519	ENSSPUG00000003726	-	100	97.519	Sphenodon_punctatus
ENSRROG00000037952	-	99	90.794	ENSSPAG00000001842	snrnp200	99	90.684	Stegastes_partitus
ENSRROG00000037952	-	100	99.719	ENSSSCG00000008127	SNRNP200	100	99.719	Sus_scrofa
ENSRROG00000037952	-	99	87.975	ENSTGUG00000014475	-	100	87.975	Taeniopygia_guttata
ENSRROG00000037952	-	99	90.418	ENSTRUG00000001307	snrnp200	99	90.309	Takifugu_rubripes
ENSRROG00000037952	-	100	85.925	ENSTNIG00000004320	snrnp200	100	85.925	Tetraodon_nigroviridis
ENSRROG00000037952	-	83	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSRROG00000037952	-	100	99.532	ENSTTRG00000004983	SNRNP200	100	99.532	Tursiops_truncatus
ENSRROG00000037952	-	95	90.729	ENSUAMG00000008395	-	95	93.023	Ursus_americanus
ENSRROG00000037952	-	100	99.906	ENSUMAG00000012385	SNRNP200	100	99.906	Ursus_maritimus
ENSRROG00000037952	-	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSRROG00000037952	-	100	100.000	ENSVVUG00000026247	SNRNP200	100	100.000	Vulpes_vulpes
ENSRROG00000037952	-	100	94.343	ENSXETG00000001243	snrnp200	100	94.343	Xenopus_tropicalis
ENSRROG00000037952	-	97	90.471	ENSXMAG00000002058	snrnp200	98	90.471	Xiphophorus_maculatus