EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000039399 (Gene tree)
Gene ID: 104675640
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 30709 bases
Position: chrKN298203.1:2646430-2677138
Accession: 104675640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000031436	SMN	PF06003.12	4.7e-106	1	1
ENSRROP00000031433	SMN	PF06003.12	4.5e-102	1	1
ENSRROP00000031441	SMN	PF06003.12	6.2e-102	1	1
ENSRROP00000031438	SMN	PF06003.12	4.6e-93	1	2
ENSRROP00000031438	SMN	PF06003.12	4.6e-93	2	2
ENSRROP00000031440	SMN	PF06003.12	1.3e-57	1	2
ENSRROP00000031440	SMN	PF06003.12	1.3e-57	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000055851	-	885	XM_010380246	ENSRROP00000031436	294 (aa)	XP_010378548	A0A2K6QRN8
ENSRROT00000055853	-	789	XM_010380248	ENSRROP00000031438	262 (aa)	XP_010378550	A0A2K6QRN0
ENSRROT00000055855	-	684	-	ENSRROP00000031440	227 (aa)	-	A0A2K6QRN7
ENSRROT00000055856	-	885	-	ENSRROP00000031441	294 (aa)	-	A0A2K6QRP3
ENSRROT00000055848	-	849	XM_010380247	ENSRROP00000031433	282 (aa)	XP_010378549	A0A2K6QRM5

Gene Model

Click here to download ENSRROG00000039399's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000039399's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000039399	-	100	82.482	ENSRROG00000031088	-	100	79.661

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000039399	-	100	97.357	ENSG00000205571	SMN2	100	97.357	Homo_sapiens
ENSRROG00000039399	-	100	97.357	ENSG00000172062	SMN1	100	97.357	Homo_sapiens
ENSRROG00000039399	-	94	50.530	ENSAPOG00000011324	smn1	94	52.878	Acanthochromis_polyacanthus
ENSRROG00000039399	-	95	88.889	ENSAMEG00000003316	-	93	88.612	Ailuropoda_melanoleuca
ENSRROG00000039399	-	91	51.685	ENSACIG00000019772	-	97	50.769	Amphilophus_citrinellus
ENSRROG00000039399	-	94	50.530	ENSAOCG00000024444	smn1	94	52.878	Amphiprion_ocellaris
ENSRROG00000039399	-	94	50.883	ENSAPEG00000016504	smn1	94	53.237	Amphiprion_percula
ENSRROG00000039399	-	92	54.244	ENSATEG00000002182	smn1	79	54.924	Anabas_testudineus
ENSRROG00000039399	-	68	56.477	ENSAPLG00000010912	-	97	54.500	Anas_platyrhynchos
ENSRROG00000039399	-	81	81.633	ENSACAG00000010017	-	95	57.295	Anolis_carolinensis
ENSRROG00000039399	-	100	91.554	ENSANAG00000032133	-	100	91.554	Aotus_nancymaae
ENSRROG00000039399	-	92	54.815	ENSACLG00000007308	smn1	88	54.651	Astatotilapia_calliptera
ENSRROG00000039399	-	54	57.746	ENSAMXG00000013884	smn1	97	48.736	Astyanax_mexicanus
ENSRROG00000039399	-	95	84.588	ENSBTAG00000005743	SMN2	96	84.588	Bos_taurus
ENSRROG00000039399	-	85	33.188	WBGene00004887	smn-1	94	32.432	Caenorhabditis_elegans
ENSRROG00000039399	-	100	96.703	ENSCJAG00000016290	-	100	96.703	Callithrix_jacchus
ENSRROG00000039399	-	95	88.172	ENSCAFG00000007812	SMN	97	87.544	Canis_familiaris
ENSRROG00000039399	-	95	88.172	ENSCAFG00020019229	-	90	87.544	Canis_lupus_dingo
ENSRROG00000039399	-	95	85.357	ENSCHIG00000015559	-	94	85.357	Capra_hircus
ENSRROG00000039399	-	99	90.110	ENSTSYG00000012058	-	96	95.000	Carlito_syrichta
ENSRROG00000039399	-	79	68.860	ENSCAPG00000011021	-	100	69.298	Cavia_aperea
ENSRROG00000039399	-	99	81.404	ENSCPOG00000012328	-	96	82.230	Cavia_porcellus
ENSRROG00000039399	-	99	82.594	ENSCPOG00000036973	-	99	82.253	Cavia_porcellus
ENSRROG00000039399	-	100	95.604	ENSCCAG00000018127	-	100	95.604	Cebus_capucinus
ENSRROG00000039399	-	100	97.802	ENSCATG00000037002	-	100	97.802	Cercocebus_atys
ENSRROG00000039399	-	99	81.132	ENSCLAG00000000284	-	99	81.132	Chinchilla_lanigera
ENSRROG00000039399	-	100	98.980	ENSCSAG00000015688	-	100	98.980	Chlorocebus_sabaeus
ENSRROG00000039399	-	81	85.938	ENSCHOG00000007346	-	100	74.206	Choloepus_hoffmanni
ENSRROG00000039399	-	99	62.278	ENSCPBG00000010968	-	99	62.593	Chrysemys_picta_bellii
ENSRROG00000039399	-	100	99.618	ENSCANG00000038242	-	100	99.618	Colobus_angolensis_palliatus
ENSRROG00000039399	-	99	91.756	ENSCANG00000033324	-	100	85.878	Colobus_angolensis_palliatus
ENSRROG00000039399	-	99	64.384	ENSCGRG00001016998	-	96	64.769	Cricetulus_griseus_chok1gshd
ENSRROG00000039399	-	99	85.714	ENSCGRG00001017959	-	97	83.986	Cricetulus_griseus_chok1gshd
ENSRROG00000039399	-	99	85.714	ENSCGRG00000007698	Smn1	97	83.986	Cricetulus_griseus_crigri
ENSRROG00000039399	-	82	64.286	ENSCSEG00000015227	smn1	98	49.825	Cynoglossus_semilaevis
ENSRROG00000039399	-	94	52.045	ENSCVAG00000007498	smn1	94	52.015	Cyprinodon_variegatus
ENSRROG00000039399	-	93	54.044	ENSDARG00000018494	smn1	96	54.745	Danio_rerio
ENSRROG00000039399	-	77	74.129	ENSDNOG00000045949	-	86	73.892	Dasypus_novemcinctus
ENSRROG00000039399	-	82	84.232	ENSDNOG00000007283	-	99	84.232	Dasypus_novemcinctus
ENSRROG00000039399	-	99	83.688	ENSDORG00000007082	Smn1	99	80.069	Dipodomys_ordii
ENSRROG00000039399	-	80	70.000	ENSETEG00000001406	-	89	70.109	Echinops_telfairi
ENSRROG00000039399	-	94	39.456	ENSEBUG00000011902	smn1	92	40.000	Eptatretus_burgeri
ENSRROG00000039399	-	92	82.890	ENSEASG00005018000	-	89	84.980	Equus_asinus_asinus
ENSRROG00000039399	-	95	89.606	ENSECAG00000015215	-	96	89.606	Equus_caballus
ENSRROG00000039399	-	89	81.349	ENSEEUG00000015777	-	100	81.349	Erinaceus_europaeus
ENSRROG00000039399	-	93	55.515	ENSELUG00000018067	smn1	94	51.636	Esox_lucius
ENSRROG00000039399	-	99	88.356	ENSFCAG00000028292	SMN	97	89.680	Felis_catus
ENSRROG00000039399	-	89	61.569	ENSFALG00000012320	-	91	59.848	Ficedula_albicollis
ENSRROG00000039399	-	99	79.461	ENSFDAG00000017683	-	99	80.471	Fukomys_damarensis
ENSRROG00000039399	-	68	57.303	ENSFHEG00000018508	smn1	96	50.923	Fundulus_heteroclitus
ENSRROG00000039399	-	96	49.077	ENSGMOG00000017279	smn1	93	50.368	Gadus_morhua
ENSRROG00000039399	-	93	60.000	ENSGALG00000002430	SMN	95	58.088	Gallus_gallus
ENSRROG00000039399	-	90	55.785	ENSGAFG00000009501	smn1	93	56.017	Gambusia_affinis
ENSRROG00000039399	-	92	55.000	ENSGACG00000010584	smn1	91	53.462	Gasterosteus_aculeatus
ENSRROG00000039399	-	91	39.151	ENSGAGG00000013639	-	90	38.095	Gopherus_agassizii
ENSRROG00000039399	-	96	63.636	ENSGAGG00000011374	-	97	61.922	Gopherus_agassizii
ENSRROG00000039399	-	100	83.206	ENSGGOG00000026704	-	95	94.884	Gorilla_gorilla
ENSRROG00000039399	-	97	96.703	ENSGGOG00000003872	-	100	96.748	Gorilla_gorilla
ENSRROG00000039399	-	92	54.815	ENSHBUG00000013987	smn1	94	55.185	Haplochromis_burtoni
ENSRROG00000039399	-	99	79.452	ENSHGLG00000001905	-	99	79.452	Heterocephalus_glaber_female
ENSRROG00000039399	-	99	79.461	ENSHGLG00000001018	-	96	80.769	Heterocephalus_glaber_female
ENSRROG00000039399	-	99	79.461	ENSHGLG00100011252	-	96	80.769	Heterocephalus_glaber_male
ENSRROG00000039399	-	99	78.853	ENSHGLG00100018676	-	100	79.078	Heterocephalus_glaber_male
ENSRROG00000039399	-	85	80.851	ENSHCOG00000017136	smn1	87	50.951	Hippocampus_comes
ENSRROG00000039399	-	91	52.239	ENSIPUG00000012580	smn1	83	51.087	Ictalurus_punctatus
ENSRROG00000039399	-	99	87.455	ENSSTOG00000012288	-	100	87.455	Ictidomys_tridecemlineatus
ENSRROG00000039399	-	66	61.494	ENSJJAG00000014853	-	89	65.143	Jaculus_jaculus
ENSRROG00000039399	-	92	54.745	ENSKMAG00000007239	smn1	96	53.053	Kryptolebias_marmoratus
ENSRROG00000039399	-	92	52.190	ENSLBEG00000022550	smn1	94	53.957	Labrus_bergylta
ENSRROG00000039399	-	93	37.050	ENSLACG00000009808	-	90	39.350	Latimeria_chalumnae
ENSRROG00000039399	-	92	54.580	ENSLOCG00000011339	smn1	93	56.790	Lepisosteus_oculatus
ENSRROG00000039399	-	99	86.813	ENSLAFG00000003425	-	100	80.986	Loxodonta_africana
ENSRROG00000039399	-	100	99.237	ENSMFAG00000031523	SMN1	100	99.237	Macaca_fascicularis
ENSRROG00000039399	-	100	95.604	ENSMFAG00000008812	-	100	93.878	Macaca_fascicularis
ENSRROG00000039399	-	100	99.237	ENSMMUG00000020214	SMN1	100	99.237	Macaca_mulatta
ENSRROG00000039399	-	100	93.407	ENSMMUG00000030594	-	100	93.197	Macaca_mulatta
ENSRROG00000039399	-	76	85.202	ENSMNEG00000036423	-	87	85.202	Macaca_nemestrina
ENSRROG00000039399	-	100	98.936	ENSMNEG00000035094	-	100	98.936	Macaca_nemestrina
ENSRROG00000039399	-	100	98.855	ENSMLEG00000041902	-	100	98.855	Mandrillus_leucophaeus
ENSRROG00000039399	-	94	51.064	ENSMAMG00000011034	smn1	96	50.352	Mastacembelus_armatus
ENSRROG00000039399	-	92	53.435	ENSMZEG00005013634	smn1	94	54.135	Maylandia_zebra
ENSRROG00000039399	-	68	56.477	ENSMGAG00000008889	-	95	54.271	Meleagris_gallopavo
ENSRROG00000039399	-	99	83.516	ENSMAUG00000010262	Smn1	97	82.562	Mesocricetus_auratus
ENSRROG00000039399	-	93	92.208	ENSMICG00000034708	-	99	87.912	Microcebus_murinus
ENSRROG00000039399	-	99	82.437	ENSMOCG00000017833	Smn1	97	82.979	Microtus_ochrogaster
ENSRROG00000039399	-	93	50.763	ENSMMOG00000005504	smn1	94	49.814	Mola_mola
ENSRROG00000039399	-	85	83.333	ENSMODG00000001436	-	95	69.718	Monodelphis_domestica
ENSRROG00000039399	-	93	49.270	ENSMALG00000008025	smn1	94	50.730	Monopterus_albus
ENSRROG00000039399	-	99	84.615	MGP_CAROLIEiJ_G0018836	Smn1	96	84.286	Mus_caroli
ENSRROG00000039399	-	99	83.516	ENSMUSG00000021645	Smn1	96	84.286	Mus_musculus
ENSRROG00000039399	-	99	82.418	MGP_PahariEiJ_G0015911	Smn1	96	80.714	Mus_pahari
ENSRROG00000039399	-	99	83.516	MGP_SPRETEiJ_G0019718	Smn1	96	83.571	Mus_spretus
ENSRROG00000039399	-	99	88.571	ENSMPUG00000014470	-	95	89.591	Mustela_putorius_furo
ENSRROG00000039399	-	94	90.000	ENSMLUG00000010603	-	92	88.502	Myotis_lucifugus
ENSRROG00000039399	-	99	84.588	ENSNGAG00000019833	Smn1	97	85.409	Nannospalax_galili
ENSRROG00000039399	-	92	54.579	ENSNBRG00000023000	smn1	94	55.185	Neolamprologus_brichardi
ENSRROG00000039399	-	100	96.939	ENSNLEG00000004454	-	100	96.939	Nomascus_leucogenys
ENSRROG00000039399	-	80	64.035	ENSMEUG00000011393	-	99	65.502	Notamacropus_eugenii
ENSRROG00000039399	-	81	90.625	ENSOPRG00000002015	-	100	83.004	Ochotona_princeps
ENSRROG00000039399	-	99	81.338	ENSODEG00000015976	-	97	81.338	Octodon_degus
ENSRROG00000039399	-	91	53.506	ENSONIG00000011799	smn1	95	54.412	Oreochromis_niloticus
ENSRROG00000039399	-	78	90.698	ENSOANG00000001626	-	95	65.201	Ornithorhynchus_anatinus
ENSRROG00000039399	-	99	80.000	ENSOCUG00000025183	-	96	80.282	Oryctolagus_cuniculus
ENSRROG00000039399	-	94	88.406	ENSOCUG00000026649	-	97	83.045	Oryctolagus_cuniculus
ENSRROG00000039399	-	99	84.247	ENSOCUG00000017097	-	99	84.247	Oryctolagus_cuniculus
ENSRROG00000039399	-	60	60.759	ENSORLG00000010552	smn1	94	52.768	Oryzias_latipes
ENSRROG00000039399	-	92	52.308	ENSORLG00020007936	smn1	93	53.469	Oryzias_latipes_hni
ENSRROG00000039399	-	60	57.927	ENSORLG00015022425	smn1	94	52.381	Oryzias_latipes_hsok
ENSRROG00000039399	-	92	52.612	ENSOMEG00000007824	smn1	94	53.091	Oryzias_melastigma
ENSRROG00000039399	-	94	81.041	ENSOGAG00000031414	-	94	80.812	Otolemur_garnettii
ENSRROG00000039399	-	93	82.847	ENSOARG00000005425	-	99	82.847	Ovis_aries
ENSRROG00000039399	-	100	97.357	ENSPPAG00000036640	-	100	97.357	Pan_paniscus
ENSRROG00000039399	-	99	88.699	ENSPPRG00000005575	-	97	90.036	Panthera_pardus
ENSRROG00000039399	-	99	89.041	ENSPTIG00000007745	-	97	90.391	Panthera_tigris_altaica
ENSRROG00000039399	-	100	96.947	ENSPTRG00000016955	-	100	96.947	Pan_troglodytes
ENSRROG00000039399	-	100	98.855	ENSPANG00000013601	-	100	98.855	Papio_anubis
ENSRROG00000039399	-	100	94.505	ENSPANG00000000253	-	98	93.056	Papio_anubis
ENSRROG00000039399	-	76	91.892	ENSPKIG00000011096	smn1	93	55.187	Paramormyrops_kingsleyae
ENSRROG00000039399	-	92	61.111	ENSPSIG00000014787	-	90	59.410	Pelodiscus_sinensis
ENSRROG00000039399	-	92	49.446	ENSPMGG00000012285	smn1	97	49.632	Periophthalmus_magnuspinnatus
ENSRROG00000039399	-	90	41.603	ENSPMAG00000005004	smn1	91	41.155	Petromyzon_marinus
ENSRROG00000039399	-	96	70.175	ENSPCIG00000025764	-	97	71.479	Phascolarctos_cinereus
ENSRROG00000039399	-	92	53.232	ENSPFOG00000007786	smn1	94	52.941	Poecilia_formosa
ENSRROG00000039399	-	90	57.438	ENSPLAG00000012071	smn1	93	57.676	Poecilia_latipinna
ENSRROG00000039399	-	90	57.025	ENSPMEG00000017085	smn1	93	57.261	Poecilia_mexicana
ENSRROG00000039399	-	90	57.438	ENSPREG00000005824	smn1	93	57.676	Poecilia_reticulata
ENSRROG00000039399	-	83	64.679	ENSPPYG00000019189	-	99	65.138	Pongo_abelii
ENSRROG00000039399	-	91	96.283	ENSPPYG00000015533	-	97	96.283	Pongo_abelii
ENSRROG00000039399	-	87	85.938	ENSPCAG00000004187	-	99	82.593	Procavia_capensis
ENSRROG00000039399	-	85	94.915	ENSPCOG00000022307	-	90	86.275	Propithecus_coquereli
ENSRROG00000039399	-	99	89.041	ENSPVAG00000005977	-	99	89.041	Pteropus_vampyrus
ENSRROG00000039399	-	92	54.579	ENSPNYG00000014148	smn1	94	55.185	Pundamilia_nyererei
ENSRROG00000039399	-	93	51.145	ENSPNAG00000014007	smn1	82	49.821	Pygocentrus_nattereri
ENSRROG00000039399	-	99	83.516	ENSRNOG00000018067	Smn1	96	82.918	Rattus_norvegicus
ENSRROG00000039399	-	100	100.000	ENSRBIG00000037052	-	100	100.000	Rhinopithecus_bieti
ENSRROG00000039399	-	93	91.209	ENSRBIG00000036775	-	95	81.429	Rhinopithecus_bieti
ENSRROG00000039399	-	86	86.400	ENSSBOG00000020112	-	87	86.800	Saimiri_boliviensis_boliviensis
ENSRROG00000039399	-	100	95.604	ENSSBOG00000011665	-	100	95.604	Saimiri_boliviensis_boliviensis
ENSRROG00000039399	-	99	68.942	ENSSHAG00000001499	-	96	71.375	Sarcophilus_harrisii
ENSRROG00000039399	-	90	54.878	ENSSFOG00015015507	smn1	94	54.878	Scleropages_formosus
ENSRROG00000039399	-	94	49.466	ENSSMAG00000007922	smn1	96	50.526	Scophthalmus_maximus
ENSRROG00000039399	-	94	50.690	ENSSDUG00000018533	smn1	94	52.688	Seriola_dumerili
ENSRROG00000039399	-	94	51.034	ENSSLDG00000021135	smn1	94	53.047	Seriola_lalandi_dorsalis
ENSRROG00000039399	-	93	65.882	ENSSPUG00000000373	-	93	63.704	Sphenodon_punctatus
ENSRROG00000039399	-	94	50.877	ENSSPAG00000004345	smn1	94	53.571	Stegastes_partitus
ENSRROG00000039399	-	99	88.699	ENSSSCG00000016970	-	99	88.699	Sus_scrofa
ENSRROG00000039399	-	72	58.216	ENSSSCG00000033865	-	94	61.972	Sus_scrofa
ENSRROG00000039399	-	97	65.354	ENSSSCG00000029127	-	96	65.726	Sus_scrofa
ENSRROG00000039399	-	98	59.431	ENSTGUG00000001548	-	96	61.278	Taeniopygia_guttata
ENSRROG00000039399	-	92	47.970	ENSTRUG00000000736	smn	96	48.214	Takifugu_rubripes
ENSRROG00000039399	-	93	48.529	ENSTNIG00000009892	smn1	95	48.029	Tetraodon_nigroviridis
ENSRROG00000039399	-	70	88.043	ENSTBEG00000002399	-	89	88.043	Tupaia_belangeri
ENSRROG00000039399	-	92	88.158	ENSTTRG00000005080	-	95	84.698	Tursiops_truncatus
ENSRROG00000039399	-	70	88.587	ENSUAMG00000024947	-	67	88.587	Ursus_americanus
ENSRROG00000039399	-	95	89.324	ENSUMAG00000007842	-	72	89.324	Ursus_maritimus
ENSRROG00000039399	-	87	89.744	ENSVPAG00000009887	-	96	75.655	Vicugna_pacos
ENSRROG00000039399	-	95	88.172	ENSVVUG00000006934	-	97	87.544	Vulpes_vulpes
ENSRROG00000039399	-	90	37.324	ENSXETG00000004912	-	79	60.317	Xenopus_tropicalis
ENSRROG00000039399	-	90	67.901	ENSXETG00000018189	smn2	95	52.759	Xenopus_tropicalis
ENSRROG00000039399	-	91	56.148	ENSXMAG00000001521	smn1	94	56.379	Xiphophorus_maculatus