EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000039517 (Gene tree)
Gene ID: 104661907
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 15756 bases
Position: chrKN295382.1:68295-84050
Accession: 104661907
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000031688	ResIII	PF04851.15	1.3e-07	1	1
ENSRROP00000031670	ResIII	PF04851.15	1.8e-07	1	1
ENSRROP00000031671	ResIII	PF04851.15	2e-07	1	1
ENSRROP00000031674	ResIII	PF04851.15	2e-07	1	1
ENSRROP00000031686	ResIII	PF04851.15	2.3e-07	1	1
ENSRROP00000031688	DEAD	PF00270.29	7e-39	1	1
ENSRROP00000031670	DEAD	PF00270.29	9.9e-39	1	1
ENSRROP00000031671	DEAD	PF00270.29	1.1e-38	1	1
ENSRROP00000031674	DEAD	PF00270.29	1.1e-38	1	1
ENSRROP00000031686	DEAD	PF00270.29	3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000056090	DDX39B-203	2697	XM_010362739	ENSRROP00000031674	428 (aa)	XP_010361041	A0A2K6QSB9
ENSRROT00000056104	DDX39B-205	960	-	ENSRROP00000031688	319 (aa)	-	A0A2K6QSC3
ENSRROT00000056086	DDX39B-201	1197	-	ENSRROP00000031670	398 (aa)	-	A0A2K6QSC1
ENSRROT00000056087	DDX39B-202	2683	XM_010362738	ENSRROP00000031671	428 (aa)	XP_010361040	A0A2K6QSB9
ENSRROT00000056102	DDX39B-204	1245	-	ENSRROP00000031686	414 (aa)	-	A0A2K6QSE9

Gene Model

Click here to download ENSRROG00000039517's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03013	RNA transport	KEGG
rro03015	mRNA surveillance pathway	KEGG
rro03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000039517's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000039517	DDX39B	92	36.802	ENSRROG00000032175	EIF4A1	98	36.802
ENSRROG00000039517	DDX39B	91	32.581	ENSRROG00000045305	DDX19A	82	32.581
ENSRROG00000039517	DDX39B	85	34.412	ENSRROG00000025014	DDX47	75	35.159
ENSRROG00000039517	DDX39B	79	30.435	ENSRROG00000035750	DDX41	54	30.435
ENSRROG00000039517	DDX39B	99	34.033	ENSRROG00000032478	DDX6	83	32.763
ENSRROG00000039517	DDX39B	86	38.919	ENSRROG00000033439	-	94	36.242
ENSRROG00000039517	DDX39B	73	32.192	ENSRROG00000008751	-	92	32.192
ENSRROG00000039517	DDX39B	84	32.764	ENSRROG00000028953	-	87	32.764
ENSRROG00000039517	DDX39B	85	38.356	ENSRROG00000042322	EIF4A3	88	38.356
ENSRROG00000039517	DDX39B	100	89.953	ENSRROG00000027985	DDX39A	100	89.953
ENSRROG00000039517	DDX39B	59	38.624	ENSRROG00000028890	-	77	38.624
ENSRROG00000039517	DDX39B	82	31.215	ENSRROG00000036763	DDX3Y	62	30.097
ENSRROG00000039517	DDX39B	87	30.343	ENSRROG00000042119	DDX59	60	30.343
ENSRROG00000039517	DDX39B	77	30.211	ENSRROG00000000127	DDX5	59	30.029
ENSRROG00000039517	DDX39B	84	30.352	ENSRROG00000033468	DDX25	83	30.556
ENSRROG00000039517	DDX39B	82	30.663	ENSRROG00000030233	DDX3X	59	30.052
ENSRROG00000039517	DDX39B	64	30.986	ENSRROG00000044428	DDX56	60	41.935
ENSRROG00000039517	DDX39B	87	31.842	ENSRROG00000032460	DDX49	78	31.842
ENSRROG00000039517	DDX39B	91	30.326	ENSRROG00000037946	-	80	30.326
ENSRROG00000039517	DDX39B	70	34.286	ENSRROG00000004632	-	96	33.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000039517	DDX39B	100	100.000	ENSG00000198563	DDX39B	100	100.000	Homo_sapiens
ENSRROG00000039517	DDX39B	100	99.766	ENSAMEG00000009508	DDX39B	99	99.766	Ailuropoda_melanoleuca
ENSRROG00000039517	DDX39B	99	93.677	ENSACIG00000004534	ddx39b	98	93.677	Amphilophus_citrinellus
ENSRROG00000039517	DDX39B	100	92.824	ENSATEG00000012366	ddx39b	100	92.824	Anabas_testudineus
ENSRROG00000039517	DDX39B	100	97.203	ENSACAG00000012240	DDX39B	100	97.203	Anolis_carolinensis
ENSRROG00000039517	DDX39B	100	100.000	ENSANAG00000030372	DDX39B	100	100.000	Aotus_nancymaae
ENSRROG00000039517	DDX39B	99	90.783	ENSACLG00000018759	ddx39b	99	90.783	Astatotilapia_calliptera
ENSRROG00000039517	DDX39B	100	92.431	ENSAMXG00000017837	ddx39b	100	92.431	Astyanax_mexicanus
ENSRROG00000039517	DDX39B	100	99.766	ENSBTAG00000014490	DDX39B	100	99.766	Bos_taurus
ENSRROG00000039517	DDX39B	100	100.000	ENSCJAG00000003152	DDX39B	100	100.000	Callithrix_jacchus
ENSRROG00000039517	DDX39B	100	99.533	ENSCAFG00000000509	DDX39B	100	100.000	Canis_familiaris
ENSRROG00000039517	DDX39B	100	99.533	ENSCAFG00020020530	DDX39B	100	99.533	Canis_lupus_dingo
ENSRROG00000039517	DDX39B	100	99.766	ENSCHIG00000004579	DDX39B	100	99.766	Capra_hircus
ENSRROG00000039517	DDX39B	100	100.000	ENSTSYG00000010226	-	100	100.000	Carlito_syrichta
ENSRROG00000039517	DDX39B	100	85.280	ENSTSYG00000029741	-	100	82.725	Carlito_syrichta
ENSRROG00000039517	DDX39B	100	99.766	ENSCAPG00000010066	DDX39B	100	99.766	Cavia_aperea
ENSRROG00000039517	DDX39B	100	99.766	ENSCPOG00000002335	DDX39B	100	99.766	Cavia_porcellus
ENSRROG00000039517	DDX39B	100	100.000	ENSCCAG00000027897	DDX39B	100	100.000	Cebus_capucinus
ENSRROG00000039517	DDX39B	99	90.353	ENSCATG00000043709	DDX39B	99	90.353	Cercocebus_atys
ENSRROG00000039517	DDX39B	100	99.766	ENSCLAG00000014555	DDX39B	100	99.766	Chinchilla_lanigera
ENSRROG00000039517	DDX39B	99	99.765	ENSCSAG00000008517	DDX39B	100	99.765	Chlorocebus_sabaeus
ENSRROG00000039517	DDX39B	66	100.000	ENSCPBG00000014671	-	100	100.000	Chrysemys_picta_bellii
ENSRROG00000039517	DDX39B	100	100.000	ENSCANG00000041217	DDX39B	100	100.000	Colobus_angolensis_palliatus
ENSRROG00000039517	DDX39B	83	98.872	ENSCGRG00001017315	-	95	99.029	Cricetulus_griseus_chok1gshd
ENSRROG00000039517	DDX39B	86	84.314	ENSCGRG00001021916	-	89	84.358	Cricetulus_griseus_chok1gshd
ENSRROG00000039517	DDX39B	97	91.277	ENSCGRG00000012479	-	100	91.589	Cricetulus_griseus_crigri
ENSRROG00000039517	DDX39B	64	98.537	ENSCGRG00000000078	-	90	98.537	Cricetulus_griseus_crigri
ENSRROG00000039517	DDX39B	100	92.184	ENSDARG00000036069	ddx39b	100	92.414	Danio_rerio
ENSRROG00000039517	DDX39B	100	100.000	ENSDNOG00000010215	DDX39B	100	100.000	Dasypus_novemcinctus
ENSRROG00000039517	DDX39B	94	99.733	ENSDORG00000004985	Ddx39b	100	99.733	Dipodomys_ordii
ENSRROG00000039517	DDX39B	94	86.898	ENSETEG00000009649	DDX39B	87	86.898	Echinops_telfairi
ENSRROG00000039517	DDX39B	100	100.000	ENSEASG00005017156	DDX39B	100	100.000	Equus_asinus_asinus
ENSRROG00000039517	DDX39B	100	100.000	ENSECAG00000007750	DDX39B	100	100.000	Equus_caballus
ENSRROG00000039517	DDX39B	100	92.343	ENSELUG00000017904	ddx39b	100	92.343	Esox_lucius
ENSRROG00000039517	DDX39B	100	99.766	ENSFCAG00000004497	DDX39B	100	99.766	Felis_catus
ENSRROG00000039517	DDX39B	100	99.766	ENSFDAG00000011074	DDX39B	100	99.766	Fukomys_damarensis
ENSRROG00000039517	DDX39B	76	99.684	ENSGAGG00000001300	-	80	99.684	Gopherus_agassizii
ENSRROG00000039517	DDX39B	100	100.000	ENSGGOG00000005989	DDX39B	100	100.000	Gorilla_gorilla
ENSRROG00000039517	DDX39B	64	88.038	ENSHBUG00000022054	-	77	88.038	Haplochromis_burtoni
ENSRROG00000039517	DDX39B	100	99.299	ENSHGLG00000019248	DDX39B	100	99.299	Heterocephalus_glaber_female
ENSRROG00000039517	DDX39B	100	99.299	ENSHGLG00100011850	DDX39B	100	99.299	Heterocephalus_glaber_male
ENSRROG00000039517	DDX39B	100	91.284	ENSIPUG00000015733	DDX39B	94	91.743	Ictalurus_punctatus
ENSRROG00000039517	DDX39B	100	99.533	ENSSTOG00000012838	DDX39B	100	99.533	Ictidomys_tridecemlineatus
ENSRROG00000039517	DDX39B	100	99.299	ENSJJAG00000005660	-	100	99.299	Jaculus_jaculus
ENSRROG00000039517	DDX39B	78	75.403	ENSLBEG00000017177	-	90	73.462	Labrus_bergylta
ENSRROG00000039517	DDX39B	99	78.251	ENSLBEG00000012254	ddx39b	99	78.220	Labrus_bergylta
ENSRROG00000039517	DDX39B	100	89.862	ENSLACG00000002110	DDX39B	100	89.862	Latimeria_chalumnae
ENSRROG00000039517	DDX39B	100	99.766	ENSLAFG00000014202	DDX39B	100	99.766	Loxodonta_africana
ENSRROG00000039517	DDX39B	100	100.000	ENSMFAG00000034233	DDX39B	100	100.000	Macaca_fascicularis
ENSRROG00000039517	DDX39B	100	100.000	ENSMMUG00000008839	DDX39B	100	100.000	Macaca_mulatta
ENSRROG00000039517	DDX39B	100	100.000	ENSMNEG00000041059	DDX39B	100	100.000	Macaca_nemestrina
ENSRROG00000039517	DDX39B	100	100.000	ENSMLEG00000043791	DDX39B	100	100.000	Mandrillus_leucophaeus
ENSRROG00000039517	DDX39B	99	90.783	ENSMZEG00005017654	ddx39b	99	90.783	Maylandia_zebra
ENSRROG00000039517	DDX39B	100	99.299	ENSMAUG00000008059	Ddx39b	100	99.299	Mesocricetus_auratus
ENSRROG00000039517	DDX39B	100	100.000	ENSMICG00000017349	DDX39B	100	100.000	Microcebus_murinus
ENSRROG00000039517	DDX39B	100	99.533	ENSMOCG00000011169	Ddx39b	100	99.533	Microtus_ochrogaster
ENSRROG00000039517	DDX39B	98	95.238	ENSMODG00000015791	DDX39B	94	95.238	Monodelphis_domestica
ENSRROG00000039517	DDX39B	56	97.765	MGP_CAROLIEiJ_G0021519	-	97	97.765	Mus_caroli
ENSRROG00000039517	DDX39B	100	99.533	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSRROG00000039517	DDX39B	100	99.533	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSRROG00000039517	DDX39B	100	99.533	MGP_SPRETEiJ_G0022424	Ddx39b	100	99.533	Mus_spretus
ENSRROG00000039517	DDX39B	100	99.766	ENSMPUG00000011407	DDX39B	100	99.766	Mustela_putorius_furo
ENSRROG00000039517	DDX39B	75	100.000	ENSMLUG00000001681	DDX39B	100	100.000	Myotis_lucifugus
ENSRROG00000039517	DDX39B	100	100.000	ENSNGAG00000022948	Ddx39b	100	100.000	Nannospalax_galili
ENSRROG00000039517	DDX39B	100	75.467	ENSNLEG00000006094	DDX39B	81	99.649	Nomascus_leucogenys
ENSRROG00000039517	DDX39B	86	100.000	ENSMEUG00000008264	DDX39B	86	100.000	Notamacropus_eugenii
ENSRROG00000039517	DDX39B	100	99.766	ENSOPRG00000011923	DDX39B	100	99.766	Ochotona_princeps
ENSRROG00000039517	DDX39B	100	99.533	ENSODEG00000018083	DDX39B	100	99.533	Octodon_degus
ENSRROG00000039517	DDX39B	100	91.898	ENSONIG00000004740	ddx39b	100	91.898	Oreochromis_niloticus
ENSRROG00000039517	DDX39B	74	99.156	ENSOANG00000008361	DDX39B	95	99.156	Ornithorhynchus_anatinus
ENSRROG00000039517	DDX39B	100	96.163	ENSOCUG00000024126	DDX39B	100	96.163	Oryctolagus_cuniculus
ENSRROG00000039517	DDX39B	86	91.421	ENSOGAG00000009067	-	100	98.457	Otolemur_garnettii
ENSRROG00000039517	DDX39B	100	98.601	ENSOGAG00000028850	-	100	98.601	Otolemur_garnettii
ENSRROG00000039517	DDX39B	100	99.766	ENSOARG00000008787	DDX39B	98	99.766	Ovis_aries
ENSRROG00000039517	DDX39B	100	100.000	ENSPPAG00000043072	DDX39B	100	100.000	Pan_paniscus
ENSRROG00000039517	DDX39B	100	99.766	ENSPPRG00000001913	DDX39B	100	99.766	Panthera_pardus
ENSRROG00000039517	DDX39B	100	98.832	ENSPTIG00000017669	DDX39B	100	98.832	Panthera_tigris_altaica
ENSRROG00000039517	DDX39B	100	100.000	ENSPTRG00000032509	DDX39B	100	100.000	Pan_troglodytes
ENSRROG00000039517	DDX39B	100	100.000	ENSPANG00000018609	DDX39B	100	100.000	Papio_anubis
ENSRROG00000039517	DDX39B	100	90.847	ENSPKIG00000011324	ddx39b	100	91.304	Paramormyrops_kingsleyae
ENSRROG00000039517	DDX39B	100	99.299	ENSPEMG00000016905	Ddx39b	100	99.299	Peromyscus_maniculatus_bairdii
ENSRROG00000039517	DDX39B	100	100.000	ENSPCIG00000017572	DDX39B	100	100.000	Phascolarctos_cinereus
ENSRROG00000039517	DDX39B	100	100.000	ENSPPYG00000016433	DDX39B	100	100.000	Pongo_abelii
ENSRROG00000039517	DDX39B	69	99.648	ENSPCAG00000003484	DDX39B	100	99.648	Procavia_capensis
ENSRROG00000039517	DDX39B	100	100.000	ENSPCOG00000018656	DDX39B	100	100.000	Propithecus_coquereli
ENSRROG00000039517	DDX39B	100	99.533	ENSPVAG00000004653	DDX39B	100	99.533	Pteropus_vampyrus
ENSRROG00000039517	DDX39B	99	82.904	ENSPNYG00000010382	ddx39b	98	82.904	Pundamilia_nyererei
ENSRROG00000039517	DDX39B	100	92.202	ENSPNAG00000026926	ddx39b	100	92.202	Pygocentrus_nattereri
ENSRROG00000039517	DDX39B	100	99.533	ENSRNOG00000000841	Ddx39b	100	99.533	Rattus_norvegicus
ENSRROG00000039517	DDX39B	98	99.682	ENSRBIG00000031309	DDX39B	99	99.682	Rhinopithecus_bieti
ENSRROG00000039517	DDX39B	100	89.720	ENSSBOG00000035513	-	97	94.805	Saimiri_boliviensis_boliviensis
ENSRROG00000039517	DDX39B	100	100.000	ENSSHAG00000003209	DDX39B	100	100.000	Sarcophilus_harrisii
ENSRROG00000039517	DDX39B	100	91.076	ENSSFOG00015016107	ddx39b	100	91.762	Scleropages_formosus
ENSRROG00000039517	DDX39B	100	93.287	ENSSDUG00000011557	ddx39b	100	93.519	Seriola_dumerili
ENSRROG00000039517	DDX39B	100	93.056	ENSSLDG00000015763	ddx39b	100	93.287	Seriola_lalandi_dorsalis
ENSRROG00000039517	DDX39B	94	87.701	ENSSARG00000005245	DDX39B	100	87.701	Sorex_araneus
ENSRROG00000039517	DDX39B	100	97.897	ENSSPUG00000012805	DDX39B	100	97.897	Sphenodon_punctatus
ENSRROG00000039517	DDX39B	100	100.000	ENSSSCG00000001400	DDX39B	100	100.000	Sus_scrofa
ENSRROG00000039517	DDX39B	100	76.869	ENSTBEG00000003721	DDX39B	100	76.869	Tupaia_belangeri
ENSRROG00000039517	DDX39B	100	91.455	ENSTTRG00000014074	DDX39B	100	91.455	Tursiops_truncatus
ENSRROG00000039517	DDX39B	100	86.977	ENSUAMG00000027335	DDX39B	100	86.977	Ursus_americanus
ENSRROG00000039517	DDX39B	100	90.888	ENSUMAG00000015124	DDX39B	100	90.888	Ursus_maritimus
ENSRROG00000039517	DDX39B	66	100.000	ENSVPAG00000009167	-	74	100.000	Vicugna_pacos
ENSRROG00000039517	DDX39B	100	99.533	ENSVVUG00000019518	DDX39B	99	99.533	Vulpes_vulpes
ENSRROG00000039517	DDX39B	100	83.953	ENSXETG00000002498	ddx39b	99	83.953	Xenopus_tropicalis