EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000039868 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: U6 snRNA-associated Sm-like protein LSm3 pseudogene
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 310 bases
Position: chrKN298658.1:29442-29751
Accession: 104678249
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000032417	LSM	PF01423.22	6.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000056845	-	270	-	ENSRROP00000032417	89 (aa)	-	A0A2K6QUE6

Gene Model

Click here to download ENSRROG00000039868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000039868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000039868	-	100	84.314	ENSRROG00000033276	-	100	84.314
ENSRROG00000039868	-	100	74.510	ENSRROG00000044047	-	100	74.510
ENSRROG00000039868	-	74	30.488	ENSRROG00000034764	SNRPD2	69	31.707
ENSRROG00000039868	-	100	68.627	ENSRROG00000044056	-	100	68.627

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000039868	-	100	84.314	ENSG00000170860	LSM3	100	84.314	Homo_sapiens
ENSRROG00000039868	-	100	80.392	ENSAPOG00000018947	lsm3	100	80.392	Acanthochromis_polyacanthus
ENSRROG00000039868	-	100	84.314	ENSAMEG00000009405	LSM3	100	84.314	Ailuropoda_melanoleuca
ENSRROG00000039868	-	100	79.412	ENSACIG00000004574	lsm3	71	79.412	Amphilophus_citrinellus
ENSRROG00000039868	-	100	80.392	ENSAOCG00000007658	lsm3	100	80.392	Amphiprion_ocellaris
ENSRROG00000039868	-	100	80.392	ENSAPEG00000018621	lsm3	100	80.392	Amphiprion_percula
ENSRROG00000039868	-	100	80.392	ENSATEG00000005153	lsm3	100	80.392	Anabas_testudineus
ENSRROG00000039868	-	92	83.158	ENSAPLG00000014499	LSM3	100	83.158	Anas_platyrhynchos
ENSRROG00000039868	-	100	83.333	ENSACAG00000013503	LSM3	100	83.333	Anolis_carolinensis
ENSRROG00000039868	-	100	81.373	ENSANAG00000002903	-	100	81.373	Aotus_nancymaae
ENSRROG00000039868	-	100	84.314	ENSANAG00000034627	LSM3	100	84.314	Aotus_nancymaae
ENSRROG00000039868	-	94	80.412	ENSACLG00000001726	-	94	80.412	Astatotilapia_calliptera
ENSRROG00000039868	-	100	82.353	ENSAMXG00000041214	lsm3	100	82.353	Astyanax_mexicanus
ENSRROG00000039868	-	93	83.333	ENSBTAG00000007363	LSM3	100	83.333	Bos_taurus
ENSRROG00000039868	-	100	59.804	WBGene00003077	lsm-3	100	59.804	Caenorhabditis_elegans
ENSRROG00000039868	-	100	82.353	ENSCAFG00000001760	LSM3	100	82.353	Canis_familiaris
ENSRROG00000039868	-	100	82.653	ENSCAFG00020016680	-	100	82.653	Canis_lupus_dingo
ENSRROG00000039868	-	100	82.353	ENSCAFG00020026452	-	100	82.353	Canis_lupus_dingo
ENSRROG00000039868	-	100	72.897	ENSCAFG00020020950	-	100	72.897	Canis_lupus_dingo
ENSRROG00000039868	-	100	82.353	ENSCAFG00020021584	-	100	82.353	Canis_lupus_dingo
ENSRROG00000039868	-	100	84.314	ENSCAFG00020017266	-	100	84.314	Canis_lupus_dingo
ENSRROG00000039868	-	100	84.314	ENSCHIG00000024650	LSM3	100	84.314	Capra_hircus
ENSRROG00000039868	-	99	65.347	ENSTSYG00000028528	-	99	65.347	Carlito_syrichta
ENSRROG00000039868	-	100	83.333	ENSTSYG00000005204	-	100	83.333	Carlito_syrichta
ENSRROG00000039868	-	93	83.333	ENSCAPG00000015760	LSM3	100	83.333	Cavia_aperea
ENSRROG00000039868	-	100	84.314	ENSCPOG00000034071	LSM3	100	84.314	Cavia_porcellus
ENSRROG00000039868	-	100	84.314	ENSCCAG00000019503	-	100	84.314	Cebus_capucinus
ENSRROG00000039868	-	100	66.667	ENSCCAG00000032763	-	100	66.667	Cebus_capucinus
ENSRROG00000039868	-	100	84.314	ENSCCAG00000036499	-	100	84.314	Cebus_capucinus
ENSRROG00000039868	-	100	84.314	ENSCATG00000039421	LSM3	100	84.314	Cercocebus_atys
ENSRROG00000039868	-	99	83.516	ENSCATG00000031630	-	99	83.516	Cercocebus_atys
ENSRROG00000039868	-	100	84.314	ENSCLAG00000015997	LSM3	100	84.314	Chinchilla_lanigera
ENSRROG00000039868	-	100	79.412	ENSCSAG00000019525	-	100	79.412	Chlorocebus_sabaeus
ENSRROG00000039868	-	100	83.333	ENSCPBG00000014531	LSM3	100	83.333	Chrysemys_picta_bellii
ENSRROG00000039868	-	100	69.231	ENSCSAVG00000009542	-	100	69.231	Ciona_savignyi
ENSRROG00000039868	-	100	81.373	ENSCANG00000018782	-	100	81.373	Colobus_angolensis_palliatus
ENSRROG00000039868	-	100	84.314	ENSCANG00000033944	-	100	84.314	Colobus_angolensis_palliatus
ENSRROG00000039868	-	100	82.353	ENSCANG00000038037	-	100	82.353	Colobus_angolensis_palliatus
ENSRROG00000039868	-	100	62.136	ENSCGRG00001008639	-	100	62.136	Cricetulus_griseus_chok1gshd
ENSRROG00000039868	-	98	86.813	ENSCGRG00001011396	-	100	86.813	Cricetulus_griseus_chok1gshd
ENSRROG00000039868	-	100	84.314	ENSCGRG00001017598	Lsm3	100	84.314	Cricetulus_griseus_chok1gshd
ENSRROG00000039868	-	92	87.209	ENSCGRG00000012129	-	100	87.209	Cricetulus_griseus_crigri
ENSRROG00000039868	-	100	84.314	ENSCGRG00000016159	Lsm3	100	84.314	Cricetulus_griseus_crigri
ENSRROG00000039868	-	100	80.392	ENSCSEG00000015071	lsm3	77	80.392	Cynoglossus_semilaevis
ENSRROG00000039868	-	100	79.412	ENSCVAG00000006933	lsm3	100	79.412	Cyprinodon_variegatus
ENSRROG00000039868	-	100	82.353	ENSDARG00000089663	lsm3	100	82.353	Danio_rerio
ENSRROG00000039868	-	100	84.314	ENSDNOG00000030808	LSM3	100	84.314	Dasypus_novemcinctus
ENSRROG00000039868	-	100	68.627	ENSDORG00000024490	-	100	68.627	Dipodomys_ordii
ENSRROG00000039868	-	100	84.314	ENSDORG00000006894	-	100	84.314	Dipodomys_ordii
ENSRROG00000039868	-	100	63.107	FBgn0051184	LSm3	100	63.107	Drosophila_melanogaster
ENSRROG00000039868	-	100	84.314	ENSETEG00000016207	LSM3	100	84.314	Echinops_telfairi
ENSRROG00000039868	-	100	74.510	ENSEBUG00000004943	lsm3	100	74.510	Eptatretus_burgeri
ENSRROG00000039868	-	100	84.314	ENSEASG00005015443	LSM3	100	84.314	Equus_asinus_asinus
ENSRROG00000039868	-	100	84.314	ENSECAG00000007803	LSM3	100	84.314	Equus_caballus
ENSRROG00000039868	-	100	81.373	ENSELUG00000018922	lsm3	100	81.373	Esox_lucius
ENSRROG00000039868	-	100	84.314	ENSFCAG00000038453	LSM3	100	84.314	Felis_catus
ENSRROG00000039868	-	100	65.347	ENSFCAG00000044344	-	100	65.347	Felis_catus
ENSRROG00000039868	-	100	83.333	ENSFALG00000012644	LSM3	100	83.333	Ficedula_albicollis
ENSRROG00000039868	-	100	84.314	ENSFDAG00000011470	LSM3	100	84.314	Fukomys_damarensis
ENSRROG00000039868	-	100	80.392	ENSFHEG00000000876	lsm3	100	80.392	Fundulus_heteroclitus
ENSRROG00000039868	-	92	81.053	ENSGMOG00000011024	lsm3	100	81.053	Gadus_morhua
ENSRROG00000039868	-	100	80.392	ENSGAFG00000013965	lsm3	100	80.392	Gambusia_affinis
ENSRROG00000039868	-	100	80.392	ENSGACG00000003488	lsm3	100	80.392	Gasterosteus_aculeatus
ENSRROG00000039868	-	100	83.333	ENSGAGG00000025707	LSM3	100	83.333	Gopherus_agassizii
ENSRROG00000039868	-	100	84.314	ENSGGOG00000010006	LSM3	100	84.314	Gorilla_gorilla
ENSRROG00000039868	-	100	80.392	ENSHBUG00000022399	lsm3	100	80.392	Haplochromis_burtoni
ENSRROG00000039868	-	100	66.667	ENSHGLG00000015564	-	100	66.667	Heterocephalus_glaber_female
ENSRROG00000039868	-	100	84.314	ENSHGLG00000000651	LSM3	100	84.314	Heterocephalus_glaber_female
ENSRROG00000039868	-	100	66.667	ENSHGLG00100010658	-	100	66.667	Heterocephalus_glaber_male
ENSRROG00000039868	-	100	84.314	ENSHGLG00100011343	LSM3	100	84.314	Heterocephalus_glaber_male
ENSRROG00000039868	-	100	79.412	ENSHCOG00000013481	lsm3	100	79.412	Hippocampus_comes
ENSRROG00000039868	-	100	82.353	ENSIPUG00000009207	lsm3	100	82.353	Ictalurus_punctatus
ENSRROG00000039868	-	100	84.314	ENSSTOG00000006842	LSM3	100	84.314	Ictidomys_tridecemlineatus
ENSRROG00000039868	-	100	83.673	ENSJJAG00000012797	-	100	83.673	Jaculus_jaculus
ENSRROG00000039868	-	99	80.220	ENSJJAG00000018311	-	100	80.220	Jaculus_jaculus
ENSRROG00000039868	-	100	84.314	ENSJJAG00000017351	Lsm3	100	84.314	Jaculus_jaculus
ENSRROG00000039868	-	100	79.412	ENSKMAG00000015182	lsm3	100	79.412	Kryptolebias_marmoratus
ENSRROG00000039868	-	96	78.571	ENSLBEG00000021292	lsm3	100	78.571	Labrus_bergylta
ENSRROG00000039868	-	100	82.353	ENSLOCG00000013560	lsm3	100	82.353	Lepisosteus_oculatus
ENSRROG00000039868	-	100	83.495	ENSLAFG00000023308	LSM3	100	83.495	Loxodonta_africana
ENSRROG00000039868	-	100	84.314	ENSMFAG00000003185	LSM3	100	84.314	Macaca_fascicularis
ENSRROG00000039868	-	100	84.314	ENSMMUG00000023126	LSM3	100	84.314	Macaca_mulatta
ENSRROG00000039868	-	100	61.765	ENSMMUG00000043596	-	100	61.765	Macaca_mulatta
ENSRROG00000039868	-	94	82.759	ENSMMUG00000002294	-	94	82.759	Macaca_mulatta
ENSRROG00000039868	-	100	84.314	ENSMNEG00000043632	LSM3	100	84.314	Macaca_nemestrina
ENSRROG00000039868	-	99	85.714	ENSMNEG00000037686	-	99	85.714	Macaca_nemestrina
ENSRROG00000039868	-	100	84.314	ENSMLEG00000036162	LSM3	100	84.314	Mandrillus_leucophaeus
ENSRROG00000039868	-	100	80.392	ENSMAMG00000012807	lsm3	100	80.392	Mastacembelus_armatus
ENSRROG00000039868	-	100	80.392	ENSMZEG00005016682	lsm3	73	80.392	Maylandia_zebra
ENSRROG00000039868	-	93	83.333	ENSMGAG00000007776	LSM3	100	83.333	Meleagris_gallopavo
ENSRROG00000039868	-	100	83.333	ENSMICG00000032361	-	100	83.333	Microcebus_murinus
ENSRROG00000039868	-	100	70.588	ENSMICG00000027821	-	100	70.588	Microcebus_murinus
ENSRROG00000039868	-	100	84.314	ENSMOCG00000014269	Lsm3	100	84.314	Microtus_ochrogaster
ENSRROG00000039868	-	100	79.412	ENSMMOG00000020715	lsm3	100	79.412	Mola_mola
ENSRROG00000039868	-	100	83.333	ENSMODG00000007275	LSM3	100	83.333	Monodelphis_domestica
ENSRROG00000039868	-	100	80.392	ENSMALG00000006485	lsm3	100	80.392	Monopterus_albus
ENSRROG00000039868	-	100	84.314	ENSMUSG00000034192	Lsm3	100	84.314	Mus_musculus
ENSRROG00000039868	-	100	84.314	MGP_PahariEiJ_G0022402	Lsm3	100	84.314	Mus_pahari
ENSRROG00000039868	-	100	84.314	MGP_SPRETEiJ_G0029681	Lsm3	100	84.314	Mus_spretus
ENSRROG00000039868	-	97	75.758	ENSMPUG00000019120	-	97	75.758	Mustela_putorius_furo
ENSRROG00000039868	-	69	96.721	ENSMPUG00000017256	-	73	96.721	Mustela_putorius_furo
ENSRROG00000039868	-	100	77.451	ENSMLUG00000024700	-	100	77.451	Myotis_lucifugus
ENSRROG00000039868	-	100	84.314	ENSMLUG00000010677	LSM3	100	84.314	Myotis_lucifugus
ENSRROG00000039868	-	100	61.765	ENSNGAG00000013716	-	100	61.765	Nannospalax_galili
ENSRROG00000039868	-	100	84.314	ENSNGAG00000022450	Lsm3	100	84.314	Nannospalax_galili
ENSRROG00000039868	-	99	66.337	ENSNGAG00000010207	-	99	66.337	Nannospalax_galili
ENSRROG00000039868	-	100	80.392	ENSNBRG00000014318	lsm3	100	80.392	Neolamprologus_brichardi
ENSRROG00000039868	-	100	76.471	ENSNLEG00000030229	-	100	76.471	Nomascus_leucogenys
ENSRROG00000039868	-	100	84.314	ENSNLEG00000005079	LSM3	100	84.314	Nomascus_leucogenys
ENSRROG00000039868	-	100	76.471	ENSODEG00000019403	-	100	76.471	Octodon_degus
ENSRROG00000039868	-	100	84.314	ENSODEG00000001726	LSM3	100	84.314	Octodon_degus
ENSRROG00000039868	-	100	83.333	ENSODEG00000019158	-	100	83.333	Octodon_degus
ENSRROG00000039868	-	100	83.333	ENSODEG00000019740	-	100	83.333	Octodon_degus
ENSRROG00000039868	-	100	80.392	ENSONIG00000000370	lsm3	100	80.392	Oreochromis_niloticus
ENSRROG00000039868	-	100	80.392	ENSONIG00000021369	-	100	80.392	Oreochromis_niloticus
ENSRROG00000039868	-	100	83.333	ENSOANG00000012273	LSM3	100	83.333	Ornithorhynchus_anatinus
ENSRROG00000039868	-	100	84.314	ENSOCUG00000027653	-	100	84.314	Oryctolagus_cuniculus
ENSRROG00000039868	-	100	79.412	ENSOCUG00000011088	-	100	79.412	Oryctolagus_cuniculus
ENSRROG00000039868	-	100	78.431	ENSORLG00000025900	lsm3	100	78.431	Oryzias_latipes
ENSRROG00000039868	-	100	78.431	ENSORLG00020007125	lsm3	100	78.431	Oryzias_latipes_hni
ENSRROG00000039868	-	100	78.431	ENSORLG00015002944	lsm3	100	78.431	Oryzias_latipes_hsok
ENSRROG00000039868	-	100	78.431	ENSOMEG00000001915	lsm3	100	78.431	Oryzias_melastigma
ENSRROG00000039868	-	100	78.000	ENSOGAG00000033051	-	100	78.000	Otolemur_garnettii
ENSRROG00000039868	-	100	84.314	ENSOGAG00000007659	-	100	84.314	Otolemur_garnettii
ENSRROG00000039868	-	96	81.633	ENSOGAG00000028858	-	100	81.633	Otolemur_garnettii
ENSRROG00000039868	-	100	83.495	ENSOARG00000000600	LSM3	100	83.495	Ovis_aries
ENSRROG00000039868	-	100	84.314	ENSPPAG00000034074	LSM3	100	84.314	Pan_paniscus
ENSRROG00000039868	-	100	84.314	ENSPPRG00000012912	-	100	84.314	Panthera_pardus
ENSRROG00000039868	-	100	83.333	ENSPPRG00000020953	-	100	83.333	Panthera_pardus
ENSRROG00000039868	-	99	78.218	ENSPPRG00000010610	-	89	78.218	Panthera_pardus
ENSRROG00000039868	-	100	84.314	ENSPTIG00000003463	-	100	84.314	Panthera_tigris_altaica
ENSRROG00000039868	-	100	84.314	ENSPTIG00000013072	-	100	84.314	Panthera_tigris_altaica
ENSRROG00000039868	-	100	84.314	ENSPTRG00000014650	LSM3	100	84.314	Pan_troglodytes
ENSRROG00000039868	-	100	63.725	ENSPANG00000032192	-	100	63.725	Papio_anubis
ENSRROG00000039868	-	100	84.314	ENSPANG00000009378	LSM3	100	84.314	Papio_anubis
ENSRROG00000039868	-	100	82.353	ENSPKIG00000008037	lsm3	91	82.353	Paramormyrops_kingsleyae
ENSRROG00000039868	-	100	83.333	ENSPSIG00000015720	LSM3	100	83.333	Pelodiscus_sinensis
ENSRROG00000039868	-	92	80.000	ENSPMGG00000012103	lsm3	96	80.000	Periophthalmus_magnuspinnatus
ENSRROG00000039868	-	100	84.314	ENSPEMG00000015797	Lsm3	100	84.314	Peromyscus_maniculatus_bairdii
ENSRROG00000039868	-	100	68.627	ENSPEMG00000020213	-	100	68.627	Peromyscus_maniculatus_bairdii
ENSRROG00000039868	-	100	80.392	ENSPFOG00000008372	lsm3	100	80.392	Poecilia_formosa
ENSRROG00000039868	-	100	80.392	ENSPLAG00000000563	lsm3	100	80.392	Poecilia_latipinna
ENSRROG00000039868	-	100	80.392	ENSPMEG00000022052	lsm3	100	80.392	Poecilia_mexicana
ENSRROG00000039868	-	100	80.392	ENSPREG00000022485	lsm3	100	80.392	Poecilia_reticulata
ENSRROG00000039868	-	100	84.314	ENSPPYG00000013402	LSM3	100	84.314	Pongo_abelii
ENSRROG00000039868	-	100	84.314	ENSPCAG00000017077	LSM3	100	84.314	Procavia_capensis
ENSRROG00000039868	-	100	83.333	ENSPCOG00000016217	-	100	83.333	Propithecus_coquereli
ENSRROG00000039868	-	93	85.542	ENSPCOG00000014435	-	98	85.542	Propithecus_coquereli
ENSRROG00000039868	-	100	84.314	ENSPVAG00000016795	LSM3	100	84.314	Pteropus_vampyrus
ENSRROG00000039868	-	100	80.392	ENSPNYG00000009552	lsm3	73	80.392	Pundamilia_nyererei
ENSRROG00000039868	-	100	82.353	ENSPNAG00000023467	lsm3	100	82.353	Pygocentrus_nattereri
ENSRROG00000039868	-	100	84.314	ENSRNOG00000008733	Lsm3	100	84.314	Rattus_norvegicus
ENSRROG00000039868	-	100	98.876	ENSRBIG00000043783	-	100	98.876	Rhinopithecus_bieti
ENSRROG00000039868	-	100	84.314	ENSRBIG00000034399	LSM3	100	84.314	Rhinopithecus_bieti
ENSRROG00000039868	-	100	84.314	ENSSBOG00000024310	LSM3	100	84.314	Saimiri_boliviensis_boliviensis
ENSRROG00000039868	-	100	82.353	ENSSFOG00015007071	lsm3	100	82.353	Scleropages_formosus
ENSRROG00000039868	-	100	80.392	ENSSMAG00000001818	lsm3	100	80.392	Scophthalmus_maximus
ENSRROG00000039868	-	100	80.392	ENSSDUG00000006040	lsm3	100	80.392	Seriola_dumerili
ENSRROG00000039868	-	100	80.392	ENSSLDG00000006399	lsm3	100	80.392	Seriola_lalandi_dorsalis
ENSRROG00000039868	-	51	74.138	ENSSARG00000005275	-	100	74.138	Sorex_araneus
ENSRROG00000039868	-	92	83.158	ENSSPUG00000017047	-	99	83.158	Sphenodon_punctatus
ENSRROG00000039868	-	100	77.451	ENSSPUG00000005394	LSM3	100	77.451	Sphenodon_punctatus
ENSRROG00000039868	-	100	80.808	ENSSPAG00000000934	lsm3	100	80.808	Stegastes_partitus
ENSRROG00000039868	-	100	84.314	ENSSSCG00000011601	LSM3	100	84.314	Sus_scrofa
ENSRROG00000039868	-	94	71.134	ENSSSCG00000023718	-	99	71.134	Sus_scrofa
ENSRROG00000039868	-	100	83.333	ENSTGUG00000008327	LSM3	100	83.333	Taeniopygia_guttata
ENSRROG00000039868	-	100	79.412	ENSTRUG00000023175	lsm3	100	79.412	Takifugu_rubripes
ENSRROG00000039868	-	100	79.412	ENSTNIG00000005589	lsm3	100	79.412	Tetraodon_nigroviridis
ENSRROG00000039868	-	100	75.490	ENSTBEG00000001050	-	99	75.490	Tupaia_belangeri
ENSRROG00000039868	-	100	84.314	ENSTTRG00000011197	LSM3	100	84.314	Tursiops_truncatus
ENSRROG00000039868	-	100	84.314	ENSUAMG00000017250	-	100	84.314	Ursus_americanus
ENSRROG00000039868	-	100	84.314	ENSUMAG00000015905	LSM3	100	84.314	Ursus_maritimus
ENSRROG00000039868	-	92	83.158	ENSVPAG00000010709	LSM3	100	83.158	Vicugna_pacos
ENSRROG00000039868	-	100	80.392	ENSVVUG00000006481	-	100	80.392	Vulpes_vulpes
ENSRROG00000039868	-	100	79.412	ENSVVUG00000029294	-	100	79.412	Vulpes_vulpes
ENSRROG00000039868	-	100	79.412	ENSVVUG00000005684	-	100	79.412	Vulpes_vulpes
ENSRROG00000039868	-	100	77.451	ENSVVUG00000024228	-	100	77.451	Vulpes_vulpes
ENSRROG00000039868	-	100	81.373	ENSVVUG00000007332	-	91	81.373	Vulpes_vulpes
ENSRROG00000039868	-	100	82.353	ENSXETG00000011534	lsm3	100	82.353	Xenopus_tropicalis
ENSRROG00000039868	-	100	80.392	ENSXCOG00000017432	LSM3	100	80.392	Xiphophorus_couchianus
ENSRROG00000039868	-	100	80.392	ENSXMAG00000009151	lsm3	100	80.392	Xiphophorus_maculatus