EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000039895 (Gene tree)
Gene ID: 104680487
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 127810 bases
Position: chrKN298942.1:859259-987068
Accession: 104680487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000032632	rRNA_proc-arch	PF13234.6	2.7e-87	1	1
ENSRROP00000032622	rRNA_proc-arch	PF13234.6	3.1e-87	1	1
ENSRROP00000032651	rRNA_proc-arch	PF13234.6	1e-67	1	2
ENSRROP00000032651	rRNA_proc-arch	PF13234.6	1e-67	2	2
ENSRROP00000032632	DEAD	PF00270.29	6.6e-17	1	1
ENSRROP00000032651	DEAD	PF00270.29	6.9e-17	1	1
ENSRROP00000032622	DEAD	PF00270.29	7.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000057081	MTREX-203	3066	-	ENSRROP00000032651	1021 (aa)	-	A0A2K6QV59
ENSRROT00000057052	MTREX-201	6143	XM_010386472	ENSRROP00000032622	1042 (aa)	XP_010384774	A0A2K6QUY8
ENSRROT00000057062	MTREX-202	6017	XM_010386474	ENSRROP00000032632	1000 (aa)	XP_010384776	A0A2K6QUZ8

Gene Model

Click here to download ENSRROG00000039895's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000039895's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000039895	MTREX	89	36.687	ENSRROG00000036429	SKIV2L	87	35.984

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000039895	MTREX	100	99.520	ENSG00000039123	MTREX	100	99.520	Homo_sapiens
ENSRROG00000039895	MTREX	100	83.238	ENSAPOG00000007814	mtrex	100	83.015	Acanthochromis_polyacanthus
ENSRROG00000039895	MTREX	100	98.370	ENSAMEG00000013856	MTREX	100	98.370	Ailuropoda_melanoleuca
ENSRROG00000039895	MTREX	91	87.879	ENSACIG00000015117	mtrex	96	87.879	Amphilophus_citrinellus
ENSRROG00000039895	MTREX	100	83.048	ENSAOCG00000011884	mtrex	100	83.048	Amphiprion_ocellaris
ENSRROG00000039895	MTREX	100	82.952	ENSAPEG00000019384	mtrex	100	82.952	Amphiprion_percula
ENSRROG00000039895	MTREX	100	83.699	ENSATEG00000015117	mtrex	100	83.699	Anabas_testudineus
ENSRROG00000039895	MTREX	94	93.293	ENSAPLG00000009694	MTREX	99	93.293	Anas_platyrhynchos
ENSRROG00000039895	MTREX	100	91.075	ENSACAG00000015200	MTREX	96	90.883	Anolis_carolinensis
ENSRROG00000039895	MTREX	100	99.040	ENSANAG00000023095	MTREX	100	99.040	Aotus_nancymaae
ENSRROG00000039895	MTREX	100	82.634	ENSACLG00000001921	mtrex	100	82.729	Astatotilapia_calliptera
ENSRROG00000039895	MTREX	97	81.729	ENSAMXG00000018751	mtrex	99	83.835	Astyanax_mexicanus
ENSRROG00000039895	MTREX	100	98.273	ENSBTAG00000010518	MTREX	100	98.273	Bos_taurus
ENSRROG00000039895	MTREX	91	53.733	WBGene00012342	mtr-4	95	53.055	Caenorhabditis_elegans
ENSRROG00000039895	MTREX	100	97.901	ENSCJAG00000001773	MTREX	100	97.901	Callithrix_jacchus
ENSRROG00000039895	MTREX	100	98.656	ENSCAFG00000006818	MTREX	100	98.656	Canis_familiaris
ENSRROG00000039895	MTREX	100	98.656	ENSCAFG00020024352	MTREX	100	98.656	Canis_lupus_dingo
ENSRROG00000039895	MTREX	100	98.273	ENSCHIG00000024413	MTREX	100	98.273	Capra_hircus
ENSRROG00000039895	MTREX	94	98.205	ENSTSYG00000007389	MTREX	100	98.205	Carlito_syrichta
ENSRROG00000039895	MTREX	96	77.197	ENSCAPG00000008696	MTREX	100	77.197	Cavia_aperea
ENSRROG00000039895	MTREX	100	98.081	ENSCPOG00000009797	MTREX	100	98.081	Cavia_porcellus
ENSRROG00000039895	MTREX	100	98.944	ENSCCAG00000014177	MTREX	100	98.944	Cebus_capucinus
ENSRROG00000039895	MTREX	100	99.808	ENSCATG00000042153	MTREX	100	99.808	Cercocebus_atys
ENSRROG00000039895	MTREX	100	97.985	ENSCLAG00000006622	MTREX	100	97.985	Chinchilla_lanigera
ENSRROG00000039895	MTREX	100	95.215	ENSCSAG00000016445	MTREX	100	95.215	Chlorocebus_sabaeus
ENSRROG00000039895	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSRROG00000039895	MTREX	100	92.042	ENSCPBG00000026551	MTREX	94	92.042	Chrysemys_picta_bellii
ENSRROG00000039895	MTREX	99	66.444	ENSCING00000003239	-	99	66.157	Ciona_intestinalis
ENSRROG00000039895	MTREX	99	65.589	ENSCSAVG00000009304	-	100	70.108	Ciona_savignyi
ENSRROG00000039895	MTREX	100	99.904	ENSCANG00000035770	MTREX	100	99.904	Colobus_angolensis_palliatus
ENSRROG00000039895	MTREX	100	97.793	ENSCGRG00001024680	Mtrex	100	97.793	Cricetulus_griseus_chok1gshd
ENSRROG00000039895	MTREX	100	97.793	ENSCGRG00000000307	Mtrex	100	97.793	Cricetulus_griseus_crigri
ENSRROG00000039895	MTREX	100	81.853	ENSCSEG00000018621	mtrex	98	81.853	Cynoglossus_semilaevis
ENSRROG00000039895	MTREX	100	83.603	ENSCVAG00000004556	mtrex	100	83.477	Cyprinodon_variegatus
ENSRROG00000039895	MTREX	100	85.005	ENSDARG00000013457	mtrex	100	84.909	Danio_rerio
ENSRROG00000039895	MTREX	100	96.941	ENSDNOG00000015375	MTREX	100	96.941	Dasypus_novemcinctus
ENSRROG00000039895	MTREX	100	98.081	ENSDORG00000006782	Mtrex	100	98.081	Dipodomys_ordii
ENSRROG00000039895	MTREX	99	63.443	FBgn0001986	Mtr4	94	65.170	Drosophila_melanogaster
ENSRROG00000039895	MTREX	85	95.935	ENSETEG00000000727	MTREX	82	95.935	Echinops_telfairi
ENSRROG00000039895	MTREX	99	74.495	ENSEBUG00000012869	mtrex	99	74.495	Eptatretus_burgeri
ENSRROG00000039895	MTREX	100	97.889	ENSEASG00005013270	MTREX	100	97.889	Equus_asinus_asinus
ENSRROG00000039895	MTREX	100	97.985	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSRROG00000039895	MTREX	98	88.293	ENSEEUG00000000527	MTREX	100	88.293	Erinaceus_europaeus
ENSRROG00000039895	MTREX	98	84.772	ENSELUG00000004898	mtrex	100	89.496	Esox_lucius
ENSRROG00000039895	MTREX	100	98.273	ENSFCAG00000010575	MTREX	100	98.273	Felis_catus
ENSRROG00000039895	MTREX	100	89.943	ENSFALG00000010850	MTREX	100	89.847	Ficedula_albicollis
ENSRROG00000039895	MTREX	100	98.081	ENSFDAG00000011199	MTREX	100	98.081	Fukomys_damarensis
ENSRROG00000039895	MTREX	100	83.699	ENSFHEG00000023014	mtrex	100	82.414	Fundulus_heteroclitus
ENSRROG00000039895	MTREX	100	79.389	ENSGMOG00000014702	mtrex	100	79.771	Gadus_morhua
ENSRROG00000039895	MTREX	100	90.805	ENSGALG00000014709	MTREX	86	90.517	Gallus_gallus
ENSRROG00000039895	MTREX	100	83.619	ENSGAFG00000012425	mtrex	98	87.397	Gambusia_affinis
ENSRROG00000039895	MTREX	100	79.068	ENSGACG00000016260	mtrex	96	85.217	Gasterosteus_aculeatus
ENSRROG00000039895	MTREX	100	91.850	ENSGAGG00000020036	MTREX	100	91.563	Gopherus_agassizii
ENSRROG00000039895	MTREX	100	99.616	ENSGGOG00000001867	MTREX	100	99.616	Gorilla_gorilla
ENSRROG00000039895	MTREX	100	82.634	ENSHBUG00000006229	mtrex	100	82.729	Haplochromis_burtoni
ENSRROG00000039895	MTREX	100	98.081	ENSHGLG00000019445	SKIV2L2	100	98.081	Heterocephalus_glaber_female
ENSRROG00000039895	MTREX	100	98.081	ENSHGLG00100011833	SKIV2L2	100	98.081	Heterocephalus_glaber_male
ENSRROG00000039895	MTREX	91	84.929	ENSHCOG00000019995	mtrex	100	84.929	Hippocampus_comes
ENSRROG00000039895	MTREX	100	85.100	ENSIPUG00000024348	skiv2l2	100	84.990	Ictalurus_punctatus
ENSRROG00000039895	MTREX	100	98.464	ENSSTOG00000010802	MTREX	100	98.464	Ictidomys_tridecemlineatus
ENSRROG00000039895	MTREX	100	90.307	ENSJJAG00000020975	Mtrex	100	90.979	Jaculus_jaculus
ENSRROG00000039895	MTREX	100	82.745	ENSKMAG00000012642	mtrex	100	82.650	Kryptolebias_marmoratus
ENSRROG00000039895	MTREX	100	83.175	ENSLBEG00000019367	mtrex	99	86.236	Labrus_bergylta
ENSRROG00000039895	MTREX	100	88.506	ENSLACG00000009075	MTREX	100	88.061	Latimeria_chalumnae
ENSRROG00000039895	MTREX	100	87.452	ENSLOCG00000010186	mtrex	100	87.069	Lepisosteus_oculatus
ENSRROG00000039895	MTREX	99	95.777	ENSLAFG00000010497	MTREX	100	95.777	Loxodonta_africana
ENSRROG00000039895	MTREX	100	99.808	ENSMFAG00000031610	MTREX	100	99.808	Macaca_fascicularis
ENSRROG00000039895	MTREX	100	98.276	ENSMMUG00000010379	MTREX	100	98.276	Macaca_mulatta
ENSRROG00000039895	MTREX	100	99.808	ENSMNEG00000032746	MTREX	100	99.808	Macaca_nemestrina
ENSRROG00000039895	MTREX	100	99.808	ENSMLEG00000041051	MTREX	100	99.808	Mandrillus_leucophaeus
ENSRROG00000039895	MTREX	95	86.072	ENSMAMG00000016753	mtrex	96	88.413	Mastacembelus_armatus
ENSRROG00000039895	MTREX	100	82.634	ENSMZEG00005000414	mtrex	100	82.729	Maylandia_zebra
ENSRROG00000039895	MTREX	94	67.510	ENSMGAG00000003980	MTREX	99	67.510	Meleagris_gallopavo
ENSRROG00000039895	MTREX	100	97.697	ENSMAUG00000010727	Mtrex	100	97.697	Mesocricetus_auratus
ENSRROG00000039895	MTREX	100	99.136	ENSMICG00000012779	MTREX	100	99.136	Microcebus_murinus
ENSRROG00000039895	MTREX	100	97.505	ENSMOCG00000019886	Mtrex	100	97.505	Microtus_ochrogaster
ENSRROG00000039895	MTREX	100	81.870	ENSMMOG00000002476	mtrex	100	81.870	Mola_mola
ENSRROG00000039895	MTREX	100	92.994	ENSMODG00000019494	MTREX	100	93.378	Monodelphis_domestica
ENSRROG00000039895	MTREX	92	82.497	ENSMALG00000002917	mtrex	99	82.497	Monopterus_albus
ENSRROG00000039895	MTREX	100	97.217	MGP_CAROLIEiJ_G0018896	Mtrex	100	97.217	Mus_caroli
ENSRROG00000039895	MTREX	100	97.409	ENSMUSG00000016018	Mtrex	100	97.409	Mus_musculus
ENSRROG00000039895	MTREX	100	97.217	MGP_PahariEiJ_G0015967	Mtrex	100	97.217	Mus_pahari
ENSRROG00000039895	MTREX	100	97.409	MGP_SPRETEiJ_G0019775	Mtrex	100	97.409	Mus_spretus
ENSRROG00000039895	MTREX	100	98.656	ENSMPUG00000007619	MTREX	100	98.656	Mustela_putorius_furo
ENSRROG00000039895	MTREX	100	96.938	ENSMLUG00000001152	MTREX	100	96.938	Myotis_lucifugus
ENSRROG00000039895	MTREX	100	98.081	ENSNGAG00000011938	Mtrex	100	98.081	Nannospalax_galili
ENSRROG00000039895	MTREX	100	82.729	ENSNBRG00000011293	mtrex	100	82.824	Neolamprologus_brichardi
ENSRROG00000039895	MTREX	100	95.402	ENSNLEG00000001494	MTREX	100	95.402	Nomascus_leucogenys
ENSRROG00000039895	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSRROG00000039895	MTREX	95	90.639	ENSOPRG00000008009	MTREX	100	82.726	Ochotona_princeps
ENSRROG00000039895	MTREX	100	97.505	ENSODEG00000017234	MTREX	100	97.505	Octodon_degus
ENSRROG00000039895	MTREX	100	82.538	ENSONIG00000007587	mtrex	100	82.634	Oreochromis_niloticus
ENSRROG00000039895	MTREX	100	98.560	ENSOCUG00000004463	MTREX	100	98.560	Oryctolagus_cuniculus
ENSRROG00000039895	MTREX	100	82.555	ENSORLG00000005443	mtrex	100	82.364	Oryzias_latipes
ENSRROG00000039895	MTREX	100	82.459	ENSORLG00020006329	mtrex	100	82.269	Oryzias_latipes_hni
ENSRROG00000039895	MTREX	100	82.555	ENSORLG00015012924	mtrex	100	82.269	Oryzias_latipes_hsok
ENSRROG00000039895	MTREX	100	81.844	ENSOMEG00000008825	mtrex	100	81.654	Oryzias_melastigma
ENSRROG00000039895	MTREX	100	98.560	ENSOGAG00000002886	MTREX	100	98.560	Otolemur_garnettii
ENSRROG00000039895	MTREX	100	97.990	ENSOARG00000007764	MTREX	100	97.990	Ovis_aries
ENSRROG00000039895	MTREX	100	99.520	ENSPPAG00000039291	MTREX	100	99.520	Pan_paniscus
ENSRROG00000039895	MTREX	100	98.273	ENSPPRG00000019701	MTREX	100	98.273	Panthera_pardus
ENSRROG00000039895	MTREX	100	96.737	ENSPTIG00000009313	MTREX	100	96.737	Panthera_tigris_altaica
ENSRROG00000039895	MTREX	100	99.520	ENSPTRG00000016878	MTREX	100	99.520	Pan_troglodytes
ENSRROG00000039895	MTREX	100	99.712	ENSPANG00000009697	MTREX	100	99.712	Papio_anubis
ENSRROG00000039895	MTREX	100	87.106	ENSPKIG00000020833	mtrex	98	88.774	Paramormyrops_kingsleyae
ENSRROG00000039895	MTREX	100	91.850	ENSPSIG00000012150	MTREX	100	92.234	Pelodiscus_sinensis
ENSRROG00000039895	MTREX	100	81.125	ENSPMGG00000002582	mtrex	100	81.125	Periophthalmus_magnuspinnatus
ENSRROG00000039895	MTREX	95	65.493	ENSPMAG00000009668	mtrex	100	65.161	Petromyzon_marinus
ENSRROG00000039895	MTREX	91	96.727	ENSPCIG00000024730	MTREX	100	96.727	Phascolarctos_cinereus
ENSRROG00000039895	MTREX	75	87.199	ENSPFOG00000003141	mtrex	100	87.437	Poecilia_formosa
ENSRROG00000039895	MTREX	100	83.413	ENSPLAG00000021311	mtrex	100	83.508	Poecilia_latipinna
ENSRROG00000039895	MTREX	91	87.513	ENSPMEG00000010597	mtrex	99	87.828	Poecilia_mexicana
ENSRROG00000039895	MTREX	100	83.222	ENSPREG00000003089	mtrex	100	83.317	Poecilia_reticulata
ENSRROG00000039895	MTREX	98	99.610	ENSPPYG00000015469	MTREX	98	99.610	Pongo_abelii
ENSRROG00000039895	MTREX	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSRROG00000039895	MTREX	99	92.955	ENSPCOG00000018092	MTREX	100	92.850	Propithecus_coquereli
ENSRROG00000039895	MTREX	100	98.464	ENSPVAG00000002445	MTREX	100	98.464	Pteropus_vampyrus
ENSRROG00000039895	MTREX	100	82.538	ENSPNYG00000006164	mtrex	100	82.634	Pundamilia_nyererei
ENSRROG00000039895	MTREX	100	85.864	ENSPNAG00000008794	mtrex	100	85.864	Pygocentrus_nattereri
ENSRROG00000039895	MTREX	99	97.376	ENSRNOG00000010125	Mtrex	97	97.376	Rattus_norvegicus
ENSRROG00000039895	MTREX	100	98.273	ENSRBIG00000034930	MTREX	100	98.273	Rhinopithecus_bieti
ENSRROG00000039895	MTREX	89	55.556	YJL050W	MTR4	89	55.556	Saccharomyces_cerevisiae
ENSRROG00000039895	MTREX	100	98.848	ENSSBOG00000026693	MTREX	100	98.848	Saimiri_boliviensis_boliviensis
ENSRROG00000039895	MTREX	96	95.386	ENSSHAG00000004600	MTREX	100	95.386	Sarcophilus_harrisii
ENSRROG00000039895	MTREX	100	87.380	ENSSFOG00015014355	skiv2l2	100	87.285	Scleropages_formosus
ENSRROG00000039895	MTREX	100	82.778	ENSSMAG00000007572	mtrex	100	82.824	Scophthalmus_maximus
ENSRROG00000039895	MTREX	100	83.683	ENSSDUG00000023789	mtrex	100	83.397	Seriola_dumerili
ENSRROG00000039895	MTREX	100	83.238	ENSSLDG00000006301	mtrex	100	83.206	Seriola_lalandi_dorsalis
ENSRROG00000039895	MTREX	100	94.530	ENSSARG00000008387	MTREX	100	94.530	Sorex_araneus
ENSRROG00000039895	MTREX	100	79.578	ENSSPUG00000007071	MTREX	100	79.770	Sphenodon_punctatus
ENSRROG00000039895	MTREX	91	87.303	ENSSPAG00000011319	mtrex	94	87.828	Stegastes_partitus
ENSRROG00000039895	MTREX	100	98.464	ENSSSCG00000016911	MTREX	100	98.464	Sus_scrofa
ENSRROG00000039895	MTREX	100	89.933	ENSTGUG00000002480	MTREX	100	89.933	Taeniopygia_guttata
ENSRROG00000039895	MTREX	100	82.762	ENSTRUG00000014571	mtrex	100	82.762	Takifugu_rubripes
ENSRROG00000039895	MTREX	100	82.438	ENSTBEG00000007769	MTREX	100	82.438	Tupaia_belangeri
ENSRROG00000039895	MTREX	100	98.081	ENSTTRG00000008678	MTREX	100	98.081	Tursiops_truncatus
ENSRROG00000039895	MTREX	100	98.369	ENSUAMG00000023061	MTREX	100	98.369	Ursus_americanus
ENSRROG00000039895	MTREX	100	97.797	ENSUMAG00000009373	MTREX	99	99.885	Ursus_maritimus
ENSRROG00000039895	MTREX	100	87.236	ENSVPAG00000011174	MTREX	100	87.236	Vicugna_pacos
ENSRROG00000039895	MTREX	100	98.656	ENSVVUG00000021337	MTREX	100	98.656	Vulpes_vulpes
ENSRROG00000039895	MTREX	100	88.399	ENSXETG00000032798	MTREX	100	88.399	Xenopus_tropicalis
ENSRROG00000039895	MTREX	100	83.222	ENSXMAG00000004799	mtrex	97	87.474	Xiphophorus_maculatus