EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000039897 (Gene tree)
Gene ID: 104658542
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 100974 bases
Position: chrKN300199.1:344566-445539
Accession: 104658541
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000032484	ResIII	PF04851.15	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000056914	-	354	XM_010358617	ENSRROP00000032486	117 (aa)	XP_010356919	A0A2K6QUQ6
ENSRROT00000056916	-	1111	XM_010358618	ENSRROP00000032488	299 (aa)	XP_010356920	A0A2K6QUN4
ENSRROT00000056918	-	384	-	ENSRROP00000032490	127 (aa)	-	A0A2K6QUP0
ENSRROT00000056912	-	3070	XM_010358616	ENSRROP00000032484	908 (aa)	XP_010356918	A0A2K6QUM6

Gene Model

Click here to download ENSRROG00000039897's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000039897's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000039897	-	55	31.538	ENSRROG00000041354	CHD1L	51	31.538
ENSRROG00000039897	-	59	32.113	ENSRROG00000029000	ERCC6L2	82	32.113
ENSRROG00000039897	-	71	43.741	ENSRROG00000020844	RAD54L	84	43.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000039897	-	100	96.923	ENSG00000197275	RAD54B	100	96.923	Homo_sapiens
ENSRROG00000039897	-	80	97.658	ENSG00000265817	FSBP	100	97.658	Homo_sapiens
ENSRROG00000039897	-	99	86.374	ENSAMEG00000005834	-	99	86.374	Ailuropoda_melanoleuca
ENSRROG00000039897	-	99	54.258	ENSACIG00000013005	rad54b	99	54.208	Amphilophus_citrinellus
ENSRROG00000039897	-	99	54.691	ENSAOCG00000008523	rad54b	99	54.691	Amphiprion_ocellaris
ENSRROG00000039897	-	99	54.615	ENSAPEG00000001673	rad54b	99	54.725	Amphiprion_percula
ENSRROG00000039897	-	99	54.426	ENSATEG00000001527	rad54b	99	54.426	Anabas_testudineus
ENSRROG00000039897	-	99	69.130	ENSAPLG00000014366	-	99	69.130	Anas_platyrhynchos
ENSRROG00000039897	-	87	71.106	ENSACAG00000003671	-	99	71.106	Anolis_carolinensis
ENSRROG00000039897	-	71	93.981	ENSANAG00000019528	-	100	93.981	Aotus_nancymaae
ENSRROG00000039897	-	86	58.913	ENSACLG00000007826	rad54b	92	58.913	Astatotilapia_calliptera
ENSRROG00000039897	-	87	56.807	ENSAMXG00000039985	rad54b	97	56.564	Astyanax_mexicanus
ENSRROG00000039897	-	99	85.132	ENSBTAG00000000632	RAD54B	99	85.132	Bos_taurus
ENSRROG00000039897	-	79	35.397	WBGene00013792	Y116A8C.13	98	33.411	Caenorhabditis_elegans
ENSRROG00000039897	-	100	94.066	ENSCJAG00000000080	-	100	95.448	Callithrix_jacchus
ENSRROG00000039897	-	99	84.945	ENSCAFG00000009179	RAD54B	99	84.945	Canis_familiaris
ENSRROG00000039897	-	99	84.835	ENSCAFG00020012084	-	99	84.835	Canis_lupus_dingo
ENSRROG00000039897	-	99	84.692	ENSCHIG00000008230	-	99	84.692	Capra_hircus
ENSRROG00000039897	-	99	89.109	ENSTSYG00000013234	-	99	89.109	Carlito_syrichta
ENSRROG00000039897	-	99	83.260	ENSCPOG00000011643	-	99	83.260	Cavia_porcellus
ENSRROG00000039897	-	100	93.956	ENSCCAG00000011754	-	100	95.172	Cebus_capucinus
ENSRROG00000039897	-	100	98.238	ENSCATG00000030661	-	100	98.619	Cercocebus_atys
ENSRROG00000039897	-	100	83.754	ENSCLAG00000010476	-	100	83.754	Chinchilla_lanigera
ENSRROG00000039897	-	100	98.128	ENSCSAG00000012712	-	100	98.128	Chlorocebus_sabaeus
ENSRROG00000039897	-	100	70.185	ENSCPBG00000003204	-	99	70.185	Chrysemys_picta_bellii
ENSRROG00000039897	-	100	99.119	ENSCANG00000017939	-	100	99.119	Colobus_angolensis_palliatus
ENSRROG00000039897	-	99	79.626	ENSCGRG00001020184	Rad54b	99	79.626	Cricetulus_griseus_chok1gshd
ENSRROG00000039897	-	99	77.814	ENSCGRG00000016752	Rad54b	99	77.814	Cricetulus_griseus_crigri
ENSRROG00000039897	-	93	61.538	ENSCSEG00000001601	rad54b	99	61.538	Cynoglossus_semilaevis
ENSRROG00000039897	-	99	55.459	ENSCVAG00000009200	rad54b	99	55.459	Cyprinodon_variegatus
ENSRROG00000039897	-	99	52.169	ENSDARG00000092134	rad54b	99	59.938	Danio_rerio
ENSRROG00000039897	-	99	84.101	ENSDNOG00000015535	-	99	84.101	Dasypus_novemcinctus
ENSRROG00000039897	-	99	83.516	ENSDORG00000002492	Rad54b	99	83.516	Dipodomys_ordii
ENSRROG00000039897	-	87	81.115	ENSETEG00000010605	-	100	81.115	Echinops_telfairi
ENSRROG00000039897	-	99	46.386	ENSEBUG00000009104	rad54b	99	46.360	Eptatretus_burgeri
ENSRROG00000039897	-	97	85.617	ENSEASG00005004021	-	99	85.617	Equus_asinus_asinus
ENSRROG00000039897	-	99	86.264	ENSECAG00000021949	-	99	86.264	Equus_caballus
ENSRROG00000039897	-	83	80.503	ENSEEUG00000008056	-	83	80.503	Erinaceus_europaeus
ENSRROG00000039897	-	99	53.459	ENSELUG00000009287	rad54b	99	53.669	Esox_lucius
ENSRROG00000039897	-	99	86.139	ENSFCAG00000015513	-	99	89.365	Felis_catus
ENSRROG00000039897	-	99	68.478	ENSFALG00000005467	-	99	68.478	Ficedula_albicollis
ENSRROG00000039897	-	99	84.818	ENSFDAG00000020541	-	100	84.818	Fukomys_damarensis
ENSRROG00000039897	-	86	57.915	ENSFHEG00000014382	rad54b	87	58.040	Fundulus_heteroclitus
ENSRROG00000039897	-	86	55.905	ENSGMOG00000014774	rad54b	98	55.905	Gadus_morhua
ENSRROG00000039897	-	100	68.147	ENSGALG00000043597	RAD54B	99	68.147	Gallus_gallus
ENSRROG00000039897	-	99	54.267	ENSGAFG00000007901	rad54b	99	54.267	Gambusia_affinis
ENSRROG00000039897	-	99	54.908	ENSGACG00000009128	rad54b	99	54.908	Gasterosteus_aculeatus
ENSRROG00000039897	-	100	69.750	ENSGAGG00000018747	-	99	69.750	Gopherus_agassizii
ENSRROG00000039897	-	99	96.480	ENSGGOG00000023516	-	99	96.480	Gorilla_gorilla
ENSRROG00000039897	-	99	53.105	ENSHBUG00000016017	rad54b	99	53.105	Haplochromis_burtoni
ENSRROG00000039897	-	99	83.060	ENSHGLG00000008263	RAD54B	99	83.060	Heterocephalus_glaber_female
ENSRROG00000039897	-	99	82.302	ENSHGLG00100008108	-	99	82.302	Heterocephalus_glaber_male
ENSRROG00000039897	-	99	52.581	ENSHCOG00000004764	rad54b	98	55.624	Hippocampus_comes
ENSRROG00000039897	-	99	52.206	ENSIPUG00000018531	rad54b	99	52.206	Ictalurus_punctatus
ENSRROG00000039897	-	99	84.106	ENSSTOG00000010791	-	99	84.106	Ictidomys_tridecemlineatus
ENSRROG00000039897	-	99	81.498	ENSJJAG00000010314	Rad54b	99	81.498	Jaculus_jaculus
ENSRROG00000039897	-	99	52.672	ENSKMAG00000004744	rad54b	99	52.672	Kryptolebias_marmoratus
ENSRROG00000039897	-	82	69.652	ENSLACG00000000859	-	100	69.652	Latimeria_chalumnae
ENSRROG00000039897	-	99	57.968	ENSLOCG00000010100	rad54b	97	62.152	Lepisosteus_oculatus
ENSRROG00000039897	-	89	84.530	ENSLAFG00000015315	-	100	84.530	Loxodonta_africana
ENSRROG00000039897	-	100	98.128	ENSMFAG00000031629	-	100	98.343	Macaca_fascicularis
ENSRROG00000039897	-	100	98.128	ENSMMUG00000005659	-	100	98.128	Macaca_mulatta
ENSRROG00000039897	-	100	98.018	ENSMNEG00000016408	-	100	98.018	Macaca_nemestrina
ENSRROG00000039897	-	100	98.348	ENSMLEG00000006946	-	100	98.348	Mandrillus_leucophaeus
ENSRROG00000039897	-	99	54.329	ENSMAMG00000012269	rad54b	99	54.329	Mastacembelus_armatus
ENSRROG00000039897	-	99	53.426	ENSMZEG00005005281	rad54b	95	58.786	Maylandia_zebra
ENSRROG00000039897	-	100	68.078	ENSMGAG00000012024	-	99	68.039	Meleagris_gallopavo
ENSRROG00000039897	-	99	79.846	ENSMAUG00000013586	Rad54b	99	79.846	Mesocricetus_auratus
ENSRROG00000039897	-	99	84.158	ENSMICG00000000754	-	99	84.158	Microcebus_murinus
ENSRROG00000039897	-	99	77.033	ENSMOCG00000020035	Rad54b	99	77.253	Microtus_ochrogaster
ENSRROG00000039897	-	99	53.972	ENSMMOG00000003394	rad54b	99	53.972	Mola_mola
ENSRROG00000039897	-	88	76.741	ENSMODG00000007343	-	99	77.125	Monodelphis_domestica
ENSRROG00000039897	-	71	58.631	ENSMALG00000001520	rad54b	99	58.631	Monopterus_albus
ENSRROG00000039897	-	99	78.108	MGP_CAROLIEiJ_G0025810	Rad54b	99	78.108	Mus_caroli
ENSRROG00000039897	-	99	77.753	ENSMUSG00000078773	Rad54b	99	77.753	Mus_musculus
ENSRROG00000039897	-	99	78.414	MGP_PahariEiJ_G0023933	Rad54b	99	78.414	Mus_pahari
ENSRROG00000039897	-	99	78.438	MGP_SPRETEiJ_G0026758	Rad54b	99	78.438	Mus_spretus
ENSRROG00000039897	-	89	87.145	ENSMPUG00000008878	-	99	87.145	Mustela_putorius_furo
ENSRROG00000039897	-	100	83.882	ENSMLUG00000008953	-	100	83.882	Myotis_lucifugus
ENSRROG00000039897	-	99	82.604	ENSNGAG00000017537	Rad54b	99	82.604	Nannospalax_galili
ENSRROG00000039897	-	99	53.888	ENSNBRG00000013394	rad54b	99	53.888	Neolamprologus_brichardi
ENSRROG00000039897	-	100	96.703	ENSNLEG00000003062	-	99	97.107	Nomascus_leucogenys
ENSRROG00000039897	-	71	75.188	ENSMEUG00000012426	-	71	75.188	Notamacropus_eugenii
ENSRROG00000039897	-	78	86.090	ENSODEG00000002650	-	95	86.090	Octodon_degus
ENSRROG00000039897	-	99	83.150	ENSODEG00000019564	-	99	83.150	Octodon_degus
ENSRROG00000039897	-	99	54.575	ENSONIG00000006067	rad54b	99	54.575	Oreochromis_niloticus
ENSRROG00000039897	-	82	77.097	ENSOANG00000011348	-	99	77.097	Ornithorhynchus_anatinus
ENSRROG00000039897	-	99	85.055	ENSOCUG00000016478	-	99	85.055	Oryctolagus_cuniculus
ENSRROG00000039897	-	99	53.700	ENSORLG00000008918	rad54b	99	61.765	Oryzias_latipes
ENSRROG00000039897	-	71	61.883	ENSORLG00020012171	rad54b	99	61.883	Oryzias_latipes_hni
ENSRROG00000039897	-	99	53.854	ENSORLG00015018536	rad54b	99	53.854	Oryzias_latipes_hsok
ENSRROG00000039897	-	84	59.073	ENSOMEG00000004345	rad54b	99	59.073	Oryzias_melastigma
ENSRROG00000039897	-	99	86.374	ENSOGAG00000007854	-	99	86.374	Otolemur_garnettii
ENSRROG00000039897	-	89	86.543	ENSOARG00000007691	-	99	86.543	Ovis_aries
ENSRROG00000039897	-	100	94.835	ENSPPAG00000029572	-	100	94.835	Pan_paniscus
ENSRROG00000039897	-	99	86.359	ENSPPRG00000007571	-	99	89.503	Panthera_pardus
ENSRROG00000039897	-	80	89.503	ENSPTIG00000012670	-	99	89.503	Panthera_tigris_altaica
ENSRROG00000039897	-	100	96.703	ENSPTRG00000020427	-	100	97.383	Pan_troglodytes
ENSRROG00000039897	-	100	98.458	ENSPANG00000019566	-	100	98.458	Papio_anubis
ENSRROG00000039897	-	99	57.952	ENSPKIG00000014974	rad54b	99	57.952	Paramormyrops_kingsleyae
ENSRROG00000039897	-	100	68.988	ENSPSIG00000002383	-	98	73.144	Pelodiscus_sinensis
ENSRROG00000039897	-	99	79.868	ENSPEMG00000012133	Rad54b	99	79.868	Peromyscus_maniculatus_bairdii
ENSRROG00000039897	-	87	57.928	ENSPMAG00000002916	rad54b	99	58.177	Petromyzon_marinus
ENSRROG00000039897	-	89	77.435	ENSPCIG00000020151	-	94	77.435	Phascolarctos_cinereus
ENSRROG00000039897	-	99	54.739	ENSPFOG00000023411	rad54b	99	54.739	Poecilia_formosa
ENSRROG00000039897	-	99	54.739	ENSPLAG00000010430	rad54b	99	54.739	Poecilia_latipinna
ENSRROG00000039897	-	99	54.739	ENSPMEG00000016873	rad54b	95	58.990	Poecilia_mexicana
ENSRROG00000039897	-	99	55.191	ENSPREG00000018443	rad54b	99	55.191	Poecilia_reticulata
ENSRROG00000039897	-	100	96.484	ENSPPYG00000018750	-	100	96.484	Pongo_abelii
ENSRROG00000039897	-	99	89.560	ENSPCOG00000026845	-	99	90.483	Propithecus_coquereli
ENSRROG00000039897	-	87	89.069	ENSPVAG00000000261	-	92	89.069	Pteropus_vampyrus
ENSRROG00000039897	-	86	58.376	ENSPNYG00000018303	rad54b	96	58.376	Pundamilia_nyererei
ENSRROG00000039897	-	100	54.144	ENSPNAG00000000295	rad54b	99	54.144	Pygocentrus_nattereri
ENSRROG00000039897	-	99	75.881	ENSRNOG00000039949	Rad54b	99	75.881	Rattus_norvegicus
ENSRROG00000039897	-	100	99.780	ENSRBIG00000020419	-	100	99.780	Rhinopithecus_bieti
ENSRROG00000039897	-	81	36.855	YBR073W	RDH54	82	37.332	Saccharomyces_cerevisiae
ENSRROG00000039897	-	100	93.846	ENSSBOG00000028501	-	100	93.846	Saimiri_boliviensis_boliviensis
ENSRROG00000039897	-	99	74.424	ENSSHAG00000017038	-	99	74.424	Sarcophilus_harrisii
ENSRROG00000039897	-	63	64.851	ENSSFOG00015008483	rad54b	88	64.851	Scleropages_formosus
ENSRROG00000039897	-	99	53.450	ENSSMAG00000018659	rad54b	99	53.432	Scophthalmus_maximus
ENSRROG00000039897	-	99	54.343	ENSSDUG00000001122	rad54b	98	54.343	Seriola_dumerili
ENSRROG00000039897	-	99	53.943	ENSSLDG00000013787	rad54b	99	54.211	Seriola_lalandi_dorsalis
ENSRROG00000039897	-	100	67.834	ENSSPUG00000016497	-	99	67.834	Sphenodon_punctatus
ENSRROG00000039897	-	99	55.240	ENSSPAG00000012800	rad54b	99	55.240	Stegastes_partitus
ENSRROG00000039897	-	100	84.488	ENSSSCG00000006101	-	99	87.735	Sus_scrofa
ENSRROG00000039897	-	99	67.424	ENSTGUG00000011880	-	99	67.424	Taeniopygia_guttata
ENSRROG00000039897	-	86	58.890	ENSTRUG00000010015	rad54b	84	58.890	Takifugu_rubripes
ENSRROG00000039897	-	99	83.150	ENSTTRG00000006312	-	99	83.150	Tursiops_truncatus
ENSRROG00000039897	-	99	86.374	ENSUMAG00000016401	-	99	86.374	Ursus_maritimus
ENSRROG00000039897	-	99	83.903	ENSVPAG00000003157	-	99	83.903	Vicugna_pacos
ENSRROG00000039897	-	99	54.376	ENSXETG00000025924	rad54b	99	59.375	Xenopus_tropicalis
ENSRROG00000039897	-	99	54.595	ENSXMAG00000013141	rad54b	99	54.595	Xiphophorus_maculatus