EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSRROG00000040063 (Gene tree)
Gene ID
104680907
Gene Symbol
ZNF550
Alias
MGC41917
Full Name
zinc finger protein 550
Gene Type
protein_coding
Species
Rhinopithecus_roxellana
Status
putative
Strand
Plus strand
Length
24640 bases
Position
chrKN299005.1:959199-983838
Accession
104680907
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRROP00000032875zf-C2H2PF00096.265.8e-3716
ENSRROP00000032875zf-C2H2PF00096.265.8e-3726
ENSRROP00000032875zf-C2H2PF00096.265.8e-3736
ENSRROP00000032875zf-C2H2PF00096.265.8e-3746
ENSRROP00000032875zf-C2H2PF00096.265.8e-3756
ENSRROP00000032875zf-C2H2PF00096.265.8e-3766
ENSRROP00000032870zf-C2H2PF00096.261.4e-3616
ENSRROP00000032870zf-C2H2PF00096.261.4e-3626
ENSRROP00000032870zf-C2H2PF00096.261.4e-3636
ENSRROP00000032870zf-C2H2PF00096.261.4e-3646
ENSRROP00000032870zf-C2H2PF00096.261.4e-3656
ENSRROP00000032870zf-C2H2PF00096.261.4e-3666
ENSRROP00000032875zf-metPF12874.70.0001811
ENSRROP00000032870zf-metPF12874.70.0004311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRROT00000057301ZNF550-2012491XM_010387000ENSRROP00000032870417 (aa)XP_010385302A0A2K6QVR2
ENSRROT00000057306ZNF550-2031131-ENSRROP00000032875376 (aa)-A0A2K6QVR9
ENSRROT00000057304ZNF550-202378-ENSRROP00000032873125 (aa)-A0A2K6QVT6
Gene Model
Click here to download ENSRROG00000040063's gene model file
Pathways
Pathway IDPathway NameSource
rro05168Herpes simplex virus 1 infectionKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000040063's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRROG00000040063ZNF5509957.500ENSRROG00000045288ZNF7019957.500
ENSRROG00000040063ZNF5509956.637ENSRROG00000031174ZNF4689856.637
ENSRROG00000040063ZNF5509950.833ENSRROG00000045625ZNF3179053.684
ENSRROG00000040063ZNF55010055.652ENSRROG00000018888ZNF2057355.652
ENSRROG00000040063ZNF5509961.674ENSRROG00000036529ZNF5829361.674
ENSRROG00000040063ZNF5509944.248ENSRROG00000037719ZNF3379843.860
ENSRROG00000040063ZNF5509952.609ENSRROG00000030540ZNF7009954.460
ENSRROG00000040063ZNF5509955.429ENSRROG00000042823ZFP19955.429
ENSRROG00000040063ZNF5509955.507ENSRROG00000032344ZNF289855.507
ENSRROG00000040063ZNF5509962.000ENSRROG00000030120ZNF8299262.000
ENSRROG00000040063ZNF5506051.542ENSRROG00000027849ZNF7685354.286
ENSRROG00000040063ZNF5509956.195ENSRROG00000033377ZNF8169656.195
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRROG00000040063ZNF55010096.325ENSG00000251369ZNF55010096.325Homo_sapiens
ENSRROG00000040063ZNF55010099.041ENSCATG00000020915ZNF55010099.041Cercocebus_atys
ENSRROG00000040063ZNF55010063.446ENSCLAG00000000250ZNF5509566.142Chinchilla_lanigera
ENSRROG00000040063ZNF5509898.039ENSCSAG00000001629ZNF55010098.039Chlorocebus_sabaeus
ENSRROG00000040063ZNF55010098.936ENSCANG00000033735ZNF55010098.936Colobus_angolensis_palliatus
ENSRROG00000040063ZNF5508971.848ENSDNOG00000033330-9970.391Dasypus_novemcinctus
ENSRROG00000040063ZNF5509968.766ENSFCAG00000034766ZNF5509968.766Felis_catus
ENSRROG00000040063ZNF55010095.801ENSGGOG00000014068ZNF55010095.801Gorilla_gorilla
ENSRROG00000040063ZNF55010071.599ENSHGLG00000018048ZNF55010071.599Heterocephalus_glaber_female
ENSRROG00000040063ZNF55010098.561ENSMFAG00000036005ZNF55010098.561Macaca_fascicularis
ENSRROG00000040063ZNF55010098.138ENSMMUG00000006122ZNF55010098.138Macaca_mulatta
ENSRROG00000040063ZNF55010098.561ENSMNEG00000041366ZNF55010098.561Macaca_nemestrina
ENSRROG00000040063ZNF55010098.801ENSMLEG00000034688ZNF55010098.801Mandrillus_leucophaeus
ENSRROG00000040063ZNF55010083.508ENSMICG00000007561ZNF55010083.508Microcebus_murinus
ENSRROG00000040063ZNF5509968.504ENSPPRG00000013475ZNF5509968.504Panthera_pardus
ENSRROG00000040063ZNF55010067.550ENSPTIG00000018007ZNF5508067.365Panthera_tigris_altaica
ENSRROG00000040063ZNF55010095.801ENSPTRG00000011560ZNF55010095.801Pan_troglodytes
ENSRROG00000040063ZNF55010098.138ENSPANG00000030602ZNF55010098.138Papio_anubis
ENSRROG00000040063ZNF55010085.864ENSPCOG00000018751ZNF55010085.864Propithecus_coquereli
ENSRROG00000040063ZNF5509971.875ENSPVAG00000000908ZNF55010072.115Pteropus_vampyrus
ENSRROG00000040063ZNF550100100.000ENSRBIG00000017275ZNF550100100.000Rhinopithecus_bieti
ENSRROG00000040063ZNF5509878.986ENSTTRG00000000293ZNF55010078.986Tursiops_truncatus

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