EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000040747 (Gene tree)
Gene ID: 104674425
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 32449 bases
Position: chrKN297983.1:1469199-1501647
Accession: 104674425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000034376	RRM_1	PF00076.22	6e-56	1	3
ENSRROP00000034376	RRM_1	PF00076.22	6e-56	2	3
ENSRROP00000034376	RRM_1	PF00076.22	6e-56	3	3
ENSRROP00000034373	RRM_1	PF00076.22	7.4e-56	1	3
ENSRROP00000034373	RRM_1	PF00076.22	7.4e-56	2	3
ENSRROP00000034373	RRM_1	PF00076.22	7.4e-56	3	3
ENSRROP00000034386	RRM_1	PF00076.22	1.9e-27	1	2
ENSRROP00000034386	RRM_1	PF00076.22	1.9e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000058822	RBM28-202	2750	XM_010378729	ENSRROP00000034376	737 (aa)	XP_010377031	A0A2K6R050
ENSRROT00000058819	RBM28-201	2825	XM_010378728	ENSRROP00000034373	762 (aa)	XP_010377030	A0A2K6R011
ENSRROT00000058832	RBM28-203	1866	-	ENSRROP00000034386	621 (aa)	-	A0A2K6R056

Gene Model

Click here to download ENSRROG00000040747's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000040747's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000040747	RBM28	100	100.000	ENSG00000106344	RBM28	100	100.000	Homo_sapiens
ENSRROG00000040747	RBM28	76	61.538	ENSAPOG00000015512	rbm28	100	51.720	Acanthochromis_polyacanthus
ENSRROG00000040747	RBM28	100	97.500	ENSAMEG00000004776	RBM28	92	93.478	Ailuropoda_melanoleuca
ENSRROG00000040747	RBM28	67	55.140	ENSACIG00000023153	rbm28	100	51.534	Amphilophus_citrinellus
ENSRROG00000040747	RBM28	76	62.500	ENSAOCG00000000462	rbm28	100	51.061	Amphiprion_ocellaris
ENSRROG00000040747	RBM28	76	62.500	ENSAPEG00000012996	rbm28	100	50.939	Amphiprion_percula
ENSRROG00000040747	RBM28	77	65.000	ENSATEG00000001672	rbm28	72	65.000	Anabas_testudineus
ENSRROG00000040747	RBM28	100	100.000	ENSANAG00000033922	RBM28	100	91.470	Aotus_nancymaae
ENSRROG00000040747	RBM28	100	52.632	ENSACLG00000025024	rbm28	91	54.386	Astatotilapia_calliptera
ENSRROG00000040747	RBM28	70	58.864	ENSAMXG00000000763	rbm28	99	59.060	Astyanax_mexicanus
ENSRROG00000040747	RBM28	82	100.000	ENSBTAG00000017001	RBM28	100	100.000	Bos_taurus
ENSRROG00000040747	RBM28	100	100.000	ENSCJAG00000017731	RBM28	100	90.551	Callithrix_jacchus
ENSRROG00000040747	RBM28	100	95.000	ENSCAFG00000001667	RBM28	100	84.535	Canis_familiaris
ENSRROG00000040747	RBM28	100	95.000	ENSCAFG00020021648	RBM28	100	84.535	Canis_lupus_dingo
ENSRROG00000040747	RBM28	100	100.000	ENSCHIG00000014146	RBM28	100	83.355	Capra_hircus
ENSRROG00000040747	RBM28	100	95.000	ENSTSYG00000002892	RBM28	100	95.000	Carlito_syrichta
ENSRROG00000040747	RBM28	83	62.158	ENSCAPG00000013218	RBM28	100	61.997	Cavia_aperea
ENSRROG00000040747	RBM28	100	95.000	ENSCPOG00000006253	RBM28	100	82.831	Cavia_porcellus
ENSRROG00000040747	RBM28	100	100.000	ENSCCAG00000035105	RBM28	100	91.470	Cebus_capucinus
ENSRROG00000040747	RBM28	100	97.638	ENSCATG00000040497	RBM28	100	97.638	Cercocebus_atys
ENSRROG00000040747	RBM28	100	79.161	ENSCLAG00000003707	RBM28	90	95.000	Chinchilla_lanigera
ENSRROG00000040747	RBM28	100	100.000	ENSCSAG00000010161	RBM28	100	97.638	Chlorocebus_sabaeus
ENSRROG00000040747	RBM28	55	100.000	ENSCHOG00000001994	-	63	88.710	Choloepus_hoffmanni
ENSRROG00000040747	RBM28	62	60.364	ENSCPBG00000018088	RBM28	87	59.615	Chrysemys_picta_bellii
ENSRROG00000040747	RBM28	72	41.260	ENSCING00000009238	-	57	41.107	Ciona_intestinalis
ENSRROG00000040747	RBM28	54	43.768	ENSCSAVG00000007149	-	94	43.695	Ciona_savignyi
ENSRROG00000040747	RBM28	100	91.452	ENSCANG00000038397	RBM28	100	100.000	Colobus_angolensis_palliatus
ENSRROG00000040747	RBM28	86	100.000	ENSCGRG00001021278	Rbm28	82	100.000	Cricetulus_griseus_chok1gshd
ENSRROG00000040747	RBM28	100	100.000	ENSCGRG00000005098	Rbm28	82	100.000	Cricetulus_griseus_crigri
ENSRROG00000040747	RBM28	100	54.545	ENSCSEG00000004212	rbm28	100	49.746	Cynoglossus_semilaevis
ENSRROG00000040747	RBM28	85	55.111	ENSCVAG00000010493	rbm28	99	49.495	Cyprinodon_variegatus
ENSRROG00000040747	RBM28	90	56.291	ENSDARG00000025332	rbm28	99	47.186	Danio_rerio
ENSRROG00000040747	RBM28	100	100.000	ENSDNOG00000001124	RBM28	100	85.059	Dasypus_novemcinctus
ENSRROG00000040747	RBM28	79	80.847	ENSDORG00000004184	Rbm28	97	80.847	Dipodomys_ordii
ENSRROG00000040747	RBM28	100	70.964	ENSETEG00000007130	RBM28	82	90.909	Echinops_telfairi
ENSRROG00000040747	RBM28	82	47.120	ENSEBUG00000004419	rbm28	92	47.120	Eptatretus_burgeri
ENSRROG00000040747	RBM28	100	97.500	ENSEASG00005008528	RBM28	100	85.919	Equus_asinus_asinus
ENSRROG00000040747	RBM28	100	97.500	ENSECAG00000007745	RBM28	100	85.677	Equus_caballus
ENSRROG00000040747	RBM28	100	75.754	ENSEEUG00000002389	RBM28	82	95.000	Erinaceus_europaeus
ENSRROG00000040747	RBM28	84	62.500	ENSELUG00000020602	rbm28	99	51.995	Esox_lucius
ENSRROG00000040747	RBM28	100	100.000	ENSFCAG00000000946	RBM28	100	100.000	Felis_catus
ENSRROG00000040747	RBM28	100	92.500	ENSFDAG00000010169	RBM28	100	84.666	Fukomys_damarensis
ENSRROG00000040747	RBM28	87	52.968	ENSGMOG00000007091	rbm28	76	50.524	Gadus_morhua
ENSRROG00000040747	RBM28	71	55.481	ENSGAFG00000004802	rbm28	97	54.324	Gambusia_affinis
ENSRROG00000040747	RBM28	75	65.714	ENSGACG00000012612	rbm28	82	52.104	Gasterosteus_aculeatus
ENSRROG00000040747	RBM28	81	69.458	ENSGAGG00000008873	RBM28	80	78.571	Gopherus_agassizii
ENSRROG00000040747	RBM28	95	94.329	ENSGGOG00000004644	RBM28	97	94.053	Gorilla_gorilla
ENSRROG00000040747	RBM28	89	52.632	ENSHBUG00000009611	rbm28	65	55.714	Haplochromis_burtoni
ENSRROG00000040747	RBM28	100	95.000	ENSHGLG00000005409	RBM28	100	84.404	Heterocephalus_glaber_female
ENSRROG00000040747	RBM28	100	95.000	ENSHGLG00100016458	RBM28	100	83.355	Heterocephalus_glaber_male
ENSRROG00000040747	RBM28	100	42.883	ENSHCOG00000010597	rbm28	79	41.199	Hippocampus_comes
ENSRROG00000040747	RBM28	77	46.154	ENSIPUG00000007103	rbm28	97	45.749	Ictalurus_punctatus
ENSRROG00000040747	RBM28	100	93.182	ENSSTOG00000002169	RBM28	100	84.987	Ictidomys_tridecemlineatus
ENSRROG00000040747	RBM28	96	97.500	ENSJJAG00000022400	Rbm28	100	74.674	Jaculus_jaculus
ENSRROG00000040747	RBM28	79	67.500	ENSKMAG00000013348	rbm28	69	67.500	Kryptolebias_marmoratus
ENSRROG00000040747	RBM28	76	65.000	ENSLBEG00000012998	rbm28	100	50.064	Labrus_bergylta
ENSRROG00000040747	RBM28	68	76.667	ENSLACG00000010485	-	100	55.459	Latimeria_chalumnae
ENSRROG00000040747	RBM28	99	62.564	ENSLOCG00000015541	rbm28	80	62.371	Lepisosteus_oculatus
ENSRROG00000040747	RBM28	100	100.000	ENSLAFG00000010717	RBM28	82	100.000	Loxodonta_africana
ENSRROG00000040747	RBM28	100	97.900	ENSMFAG00000031036	RBM28	100	97.900	Macaca_fascicularis
ENSRROG00000040747	RBM28	100	97.769	ENSMMUG00000007250	RBM28	100	97.769	Macaca_mulatta
ENSRROG00000040747	RBM28	100	97.500	ENSMNEG00000036970	RBM28	100	97.500	Macaca_nemestrina
ENSRROG00000040747	RBM28	86	98.171	ENSMLEG00000037717	RBM28	100	98.171	Mandrillus_leucophaeus
ENSRROG00000040747	RBM28	100	62.500	ENSMAMG00000008525	rbm28	100	50.570	Mastacembelus_armatus
ENSRROG00000040747	RBM28	93	48.501	ENSMZEG00005019625	rbm28	70	53.414	Maylandia_zebra
ENSRROG00000040747	RBM28	100	100.000	ENSMAUG00000002263	Rbm28	82	100.000	Mesocricetus_auratus
ENSRROG00000040747	RBM28	94	82.383	ENSMICG00000000107	RBM28	100	83.380	Microcebus_murinus
ENSRROG00000040747	RBM28	100	100.000	ENSMOCG00000014615	Rbm28	81	100.000	Microtus_ochrogaster
ENSRROG00000040747	RBM28	70	54.608	ENSMMOG00000008600	rbm28	99	52.917	Mola_mola
ENSRROG00000040747	RBM28	100	87.500	ENSMODG00000015151	RBM28	99	71.969	Monodelphis_domestica
ENSRROG00000040747	RBM28	77	65.000	ENSMALG00000006419	rbm28	69	65.000	Monopterus_albus
ENSRROG00000040747	RBM28	100	97.500	MGP_CAROLIEiJ_G0028162	Rbm28	100	80.366	Mus_caroli
ENSRROG00000040747	RBM28	100	97.500	ENSMUSG00000029701	Rbm28	100	79.974	Mus_musculus
ENSRROG00000040747	RBM28	100	97.500	MGP_PahariEiJ_G0021920	Rbm28	100	80.105	Mus_pahari
ENSRROG00000040747	RBM28	100	97.500	MGP_SPRETEiJ_G0029162	Rbm28	100	80.366	Mus_spretus
ENSRROG00000040747	RBM28	100	100.000	ENSMPUG00000006511	RBM28	100	83.007	Mustela_putorius_furo
ENSRROG00000040747	RBM28	100	100.000	ENSMLUG00000002186	RBM28	100	84.273	Myotis_lucifugus
ENSRROG00000040747	RBM28	100	92.500	ENSNGAG00000017946	-	100	77.457	Nannospalax_galili
ENSRROG00000040747	RBM28	100	100.000	ENSNGAG00000006480	-	81	100.000	Nannospalax_galili
ENSRROG00000040747	RBM28	100	100.000	ENSNLEG00000012307	RBM28	100	100.000	Nomascus_leucogenys
ENSRROG00000040747	RBM28	81	86.250	ENSMEUG00000009611	RBM28	91	86.250	Notamacropus_eugenii
ENSRROG00000040747	RBM28	75	95.000	ENSOPRG00000015140	RBM28	90	76.136	Ochotona_princeps
ENSRROG00000040747	RBM28	76	88.917	ENSODEG00000013217	-	83	88.917	Octodon_degus
ENSRROG00000040747	RBM28	100	80.108	ENSODEG00000003213	-	100	79.973	Octodon_degus
ENSRROG00000040747	RBM28	79	52.667	ENSONIG00000014924	rbm28	100	49.430	Oreochromis_niloticus
ENSRROG00000040747	RBM28	100	85.000	ENSOANG00000000815	-	100	60.373	Ornithorhynchus_anatinus
ENSRROG00000040747	RBM28	100	100.000	ENSOCUG00000003009	RBM28	100	82.008	Oryctolagus_cuniculus
ENSRROG00000040747	RBM28	77	67.500	ENSORLG00000009636	rbm28	69	67.500	Oryzias_latipes
ENSRROG00000040747	RBM28	77	67.500	ENSORLG00020002123	rbm28	70	67.500	Oryzias_latipes_hni
ENSRROG00000040747	RBM28	99	62.136	ENSORLG00015015030	rbm28	97	60.784	Oryzias_latipes_hsok
ENSRROG00000040747	RBM28	77	67.500	ENSOMEG00000007801	rbm28	70	67.500	Oryzias_melastigma
ENSRROG00000040747	RBM28	94	92.500	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSRROG00000040747	RBM28	100	83.029	ENSOARG00000002547	RBM28	100	83.029	Ovis_aries
ENSRROG00000040747	RBM28	100	100.000	ENSPPAG00000041730	RBM28	100	100.000	Pan_paniscus
ENSRROG00000040747	RBM28	100	100.000	ENSPPRG00000004420	RBM28	100	100.000	Panthera_pardus
ENSRROG00000040747	RBM28	100	100.000	ENSPTIG00000008550	RBM28	100	100.000	Panthera_tigris_altaica
ENSRROG00000040747	RBM28	100	100.000	ENSPTRG00000019659	RBM28	100	100.000	Pan_troglodytes
ENSRROG00000040747	RBM28	100	97.900	ENSPANG00000022295	RBM28	100	97.900	Papio_anubis
ENSRROG00000040747	RBM28	99	57.500	ENSPKIG00000023453	rbm28	72	57.500	Paramormyrops_kingsleyae
ENSRROG00000040747	RBM28	89	53.882	ENSPMGG00000012840	rbm28	100	48.556	Periophthalmus_magnuspinnatus
ENSRROG00000040747	RBM28	96	100.000	ENSPEMG00000020673	Rbm28	100	77.487	Peromyscus_maniculatus_bairdii
ENSRROG00000040747	RBM28	58	45.478	ENSPMAG00000002948	-	99	46.667	Petromyzon_marinus
ENSRROG00000040747	RBM28	100	87.500	ENSPCIG00000012810	RBM28	100	70.964	Phascolarctos_cinereus
ENSRROG00000040747	RBM28	80	65.000	ENSPFOG00000018209	rbm28	100	50.191	Poecilia_formosa
ENSRROG00000040747	RBM28	79	65.000	ENSPLAG00000016078	rbm28	68	65.000	Poecilia_latipinna
ENSRROG00000040747	RBM28	80	65.000	ENSPMEG00000004292	rbm28	100	50.318	Poecilia_mexicana
ENSRROG00000040747	RBM28	75	65.000	ENSPREG00000014287	rbm28	98	48.258	Poecilia_reticulata
ENSRROG00000040747	RBM28	100	100.000	ENSPPYG00000017975	RBM28	100	95.932	Pongo_abelii
ENSRROG00000040747	RBM28	64	97.500	ENSPCAG00000008223	RBM28	83	77.500	Procavia_capensis
ENSRROG00000040747	RBM28	100	100.000	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSRROG00000040747	RBM28	79	91.163	ENSPVAG00000005443	RBM28	76	91.163	Pteropus_vampyrus
ENSRROG00000040747	RBM28	100	52.632	ENSPNYG00000014003	rbm28	72	53.414	Pundamilia_nyererei
ENSRROG00000040747	RBM28	100	97.500	ENSRNOG00000005468	Rbm28	82	97.500	Rattus_norvegicus
ENSRROG00000040747	RBM28	100	100.000	ENSRBIG00000033990	RBM28	100	100.000	Rhinopithecus_bieti
ENSRROG00000040747	RBM28	82	100.000	ENSSBOG00000012308	RBM28	100	89.501	Saimiri_boliviensis_boliviensis
ENSRROG00000040747	RBM28	96	66.486	ENSSHAG00000017017	RBM28	99	65.909	Sarcophilus_harrisii
ENSRROG00000040747	RBM28	70	53.425	ENSSMAG00000003885	rbm28	99	51.660	Scophthalmus_maximus
ENSRROG00000040747	RBM28	77	57.500	ENSSLDG00000020099	rbm28	69	57.500	Seriola_lalandi_dorsalis
ENSRROG00000040747	RBM28	71	97.500	ENSSARG00000008303	RBM28	81	84.962	Sorex_araneus
ENSRROG00000040747	RBM28	66	75.000	ENSSPUG00000000838	RBM28	79	75.000	Sphenodon_punctatus
ENSRROG00000040747	RBM28	70	52.423	ENSSPAG00000023305	rbm28	100	49.457	Stegastes_partitus
ENSRROG00000040747	RBM28	100	100.000	ENSSSCG00000031847	RBM28	100	84.273	Sus_scrofa
ENSRROG00000040747	RBM28	77	65.000	ENSTRUG00000013311	rbm28	99	48.995	Takifugu_rubripes
ENSRROG00000040747	RBM28	99	65.000	ENSTNIG00000017962	rbm28	99	51.289	Tetraodon_nigroviridis
ENSRROG00000040747	RBM28	86	88.166	ENSTBEG00000012749	RBM28	86	88.166	Tupaia_belangeri
ENSRROG00000040747	RBM28	100	100.000	ENSTTRG00000013647	RBM28	82	100.000	Tursiops_truncatus
ENSRROG00000040747	RBM28	100	100.000	ENSUAMG00000006949	RBM28	85	100.000	Ursus_americanus
ENSRROG00000040747	RBM28	100	100.000	ENSUMAG00000005997	RBM28	100	84.404	Ursus_maritimus
ENSRROG00000040747	RBM28	94	72.774	ENSVPAG00000008304	RBM28	87	75.187	Vicugna_pacos
ENSRROG00000040747	RBM28	100	95.000	ENSVVUG00000007270	RBM28	100	84.273	Vulpes_vulpes
ENSRROG00000040747	RBM28	100	67.500	ENSXETG00000009271	rbm28	100	55.442	Xenopus_tropicalis
ENSRROG00000040747	RBM28	71	53.531	ENSXCOG00000020357	rbm28	99	51.992	Xiphophorus_couchianus
ENSRROG00000040747	RBM28	79	67.500	ENSXMAG00000004415	rbm28	82	67.500	Xiphophorus_maculatus