EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000040969 (Gene tree)
Gene ID: 104663904
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 56978 bases
Position: chrKN295893.1:7458598-7515575
Accession: 104663904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000034917	PRP1_N	PF06424.12	2.5e-57	1	1
ENSRROP00000034921	PRP1_N	PF06424.12	2.5e-57	1	1
ENSRROP00000034926	PRP1_N	PF06424.12	6.3e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000059367	PRPF6-201	2823	-	ENSRROP00000034917	940 (aa)	-	A0A2K6R1K5
ENSRROT00000059376	PRPF6-203	1773	-	ENSRROP00000034926	590 (aa)	-	A0A2K6R1N2
ENSRROT00000059371	PRPF6-202	2814	XM_010365293	ENSRROP00000034921	937 (aa)	XP_010363595	A0A2K6R1M8

Gene Model

Click here to download ENSRROG00000040969's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000040969's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000040969	PRPF6	100	96.508	ENSG00000101161	PRPF6	100	96.508	Homo_sapiens
ENSRROG00000040969	PRPF6	98	92.388	ENSAPOG00000010395	prpf6	96	89.630	Acanthochromis_polyacanthus
ENSRROG00000040969	PRPF6	98	97.924	ENSAMEG00000001916	PRPF6	99	93.129	Ailuropoda_melanoleuca
ENSRROG00000040969	PRPF6	100	88.889	ENSACIG00000019862	prpf6	96	89.312	Amphilophus_citrinellus
ENSRROG00000040969	PRPF6	98	92.388	ENSAOCG00000012988	prpf6	96	89.524	Amphiprion_ocellaris
ENSRROG00000040969	PRPF6	98	90.484	ENSAPEG00000008301	prpf6	100	84.312	Amphiprion_percula
ENSRROG00000040969	PRPF6	100	88.571	ENSATEG00000005581	prpf6	96	88.995	Anabas_testudineus
ENSRROG00000040969	PRPF6	98	97.751	ENSACAG00000006464	PRPF6	95	93.651	Anolis_carolinensis
ENSRROG00000040969	PRPF6	100	99.492	ENSANAG00000012661	PRPF6	97	99.261	Aotus_nancymaae
ENSRROG00000040969	PRPF6	98	92.042	ENSACLG00000025875	prpf6	96	89.206	Astatotilapia_calliptera
ENSRROG00000040969	PRPF6	98	92.388	ENSAMXG00000001929	prpf6	96	89.936	Astyanax_mexicanus
ENSRROG00000040969	PRPF6	98	97.924	ENSBTAG00000011656	PRPF6	100	94.074	Bos_taurus
ENSRROG00000040969	PRPF6	100	99.661	ENSCJAG00000010616	PRPF6	100	95.767	Callithrix_jacchus
ENSRROG00000040969	PRPF6	98	97.924	ENSCAFG00000013165	PRPF6	100	94.497	Canis_familiaris
ENSRROG00000040969	PRPF6	98	97.924	ENSCAFG00020002050	PRPF6	100	94.497	Canis_lupus_dingo
ENSRROG00000040969	PRPF6	98	97.924	ENSCHIG00000018187	PRPF6	100	94.074	Capra_hircus
ENSRROG00000040969	PRPF6	98	98.270	ENSTSYG00000007814	PRPF6	100	94.921	Carlito_syrichta
ENSRROG00000040969	PRPF6	98	97.059	ENSCAPG00000015077	PRPF6	100	93.051	Cavia_aperea
ENSRROG00000040969	PRPF6	98	98.270	ENSCPOG00000007518	PRPF6	100	94.815	Cavia_porcellus
ENSRROG00000040969	PRPF6	100	99.492	ENSCCAG00000024564	PRPF6	100	96.802	Cebus_capucinus
ENSRROG00000040969	PRPF6	100	99.831	ENSCATG00000037473	PRPF6	100	96.402	Cercocebus_atys
ENSRROG00000040969	PRPF6	100	90.794	ENSCLAG00000003854	PRPF6	100	90.794	Chinchilla_lanigera
ENSRROG00000040969	PRPF6	100	91.377	ENSCSAG00000016742	PRPF6	100	91.377	Chlorocebus_sabaeus
ENSRROG00000040969	PRPF6	85	80.488	ENSCHOG00000003315	-	100	80.488	Choloepus_hoffmanni
ENSRROG00000040969	PRPF6	98	97.751	ENSCPBG00000013964	PRPF6	96	93.862	Chrysemys_picta_bellii
ENSRROG00000040969	PRPF6	96	73.693	ENSCING00000008817	-	99	70.421	Ciona_intestinalis
ENSRROG00000040969	PRPF6	100	96.614	ENSCANG00000038230	PRPF6	100	96.614	Colobus_angolensis_palliatus
ENSRROG00000040969	PRPF6	98	98.270	ENSCGRG00001022666	Prpf6	100	94.921	Cricetulus_griseus_chok1gshd
ENSRROG00000040969	PRPF6	100	83.704	ENSCSEG00000018561	prpf6	100	84.127	Cynoglossus_semilaevis
ENSRROG00000040969	PRPF6	98	92.215	ENSCVAG00000010550	prpf6	96	89.630	Cyprinodon_variegatus
ENSRROG00000040969	PRPF6	100	88.571	ENSDARG00000091367	prpf6	99	88.995	Danio_rerio
ENSRROG00000040969	PRPF6	98	97.578	ENSDNOG00000040544	PRPF6	100	93.545	Dasypus_novemcinctus
ENSRROG00000040969	PRPF6	94	97.464	ENSDORG00000005406	Prpf6	97	97.464	Dipodomys_ordii
ENSRROG00000040969	PRPF6	99	69.017	FBgn0036828	CG6841	98	69.444	Drosophila_melanogaster
ENSRROG00000040969	PRPF6	85	90.756	ENSETEG00000004447	PRPF6	77	100.000	Echinops_telfairi
ENSRROG00000040969	PRPF6	98	87.263	ENSEBUG00000008835	prpf6	99	83.844	Eptatretus_burgeri
ENSRROG00000040969	PRPF6	98	97.924	ENSEASG00005023115	PRPF6	100	94.180	Equus_asinus_asinus
ENSRROG00000040969	PRPF6	98	97.924	ENSECAG00000013983	PRPF6	100	90.053	Equus_caballus
ENSRROG00000040969	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	81	100.000	Erinaceus_europaeus
ENSRROG00000040969	PRPF6	98	90.830	ENSELUG00000001945	prpf6	93	87.831	Esox_lucius
ENSRROG00000040969	PRPF6	98	97.924	ENSFCAG00000001183	PRPF6	100	94.180	Felis_catus
ENSRROG00000040969	PRPF6	98	97.578	ENSFALG00000010326	-	97	93.862	Ficedula_albicollis
ENSRROG00000040969	PRPF6	97	90.957	ENSFALG00000006046	-	97	86.561	Ficedula_albicollis
ENSRROG00000040969	PRPF6	98	98.270	ENSFDAG00000006451	PRPF6	97	98.270	Fukomys_damarensis
ENSRROG00000040969	PRPF6	98	93.080	ENSFHEG00000000560	prpf6	96	89.735	Fundulus_heteroclitus
ENSRROG00000040969	PRPF6	98	87.993	ENSGMOG00000015622	prpf6	99	85.474	Gadus_morhua
ENSRROG00000040969	PRPF6	98	97.578	ENSGALG00000006001	PRPF6	100	93.968	Gallus_gallus
ENSRROG00000040969	PRPF6	100	84.339	ENSGAFG00000021109	prpf6	96	84.762	Gambusia_affinis
ENSRROG00000040969	PRPF6	98	90.311	ENSGACG00000002576	prpf6	99	87.725	Gasterosteus_aculeatus
ENSRROG00000040969	PRPF6	98	97.751	ENSGAGG00000008653	PRPF6	96	93.757	Gopherus_agassizii
ENSRROG00000040969	PRPF6	100	99.831	ENSGGOG00000016876	PRPF6	100	99.831	Gorilla_gorilla
ENSRROG00000040969	PRPF6	98	92.042	ENSHBUG00000004496	prpf6	96	89.206	Haplochromis_burtoni
ENSRROG00000040969	PRPF6	98	98.270	ENSHGLG00000009222	PRPF6	100	94.815	Heterocephalus_glaber_female
ENSRROG00000040969	PRPF6	98	98.270	ENSHGLG00100016600	PRPF6	100	94.680	Heterocephalus_glaber_male
ENSRROG00000040969	PRPF6	98	91.003	ENSHCOG00000011513	prpf6	96	88.042	Hippocampus_comes
ENSRROG00000040969	PRPF6	100	89.630	ENSIPUG00000004912	prpf6	96	89.630	Ictalurus_punctatus
ENSRROG00000040969	PRPF6	100	92.072	ENSSTOG00000002922	PRPF6	100	91.860	Ictidomys_tridecemlineatus
ENSRROG00000040969	PRPF6	98	98.270	ENSJJAG00000000836	Prpf6	100	94.815	Jaculus_jaculus
ENSRROG00000040969	PRPF6	100	88.889	ENSKMAG00000017800	prpf6	96	89.312	Kryptolebias_marmoratus
ENSRROG00000040969	PRPF6	98	91.349	ENSLBEG00000012582	prpf6	96	88.360	Labrus_bergylta
ENSRROG00000040969	PRPF6	98	95.329	ENSLOCG00000004827	prpf6	96	89.841	Lepisosteus_oculatus
ENSRROG00000040969	PRPF6	98	97.751	ENSLAFG00000005272	PRPF6	100	93.757	Loxodonta_africana
ENSRROG00000040969	PRPF6	100	99.661	ENSMFAG00000037542	PRPF6	100	99.661	Macaca_fascicularis
ENSRROG00000040969	PRPF6	98	97.924	ENSMMUG00000015558	PRPF6	98	99.653	Macaca_mulatta
ENSRROG00000040969	PRPF6	100	85.851	ENSMNEG00000045555	PRPF6	100	85.851	Macaca_nemestrina
ENSRROG00000040969	PRPF6	98	92.388	ENSMAMG00000010718	prpf6	96	89.335	Mastacembelus_armatus
ENSRROG00000040969	PRPF6	98	92.042	ENSMZEG00005015261	-	99	89.101	Maylandia_zebra
ENSRROG00000040969	PRPF6	98	91.869	ENSMZEG00005026539	prpf6	97	92.561	Maylandia_zebra
ENSRROG00000040969	PRPF6	98	97.578	ENSMGAG00000006634	PRPF6	100	93.702	Meleagris_gallopavo
ENSRROG00000040969	PRPF6	98	98.270	ENSMAUG00000013969	Prpf6	100	95.026	Mesocricetus_auratus
ENSRROG00000040969	PRPF6	88	98.069	ENSMICG00000017793	PRPF6	96	98.069	Microcebus_murinus
ENSRROG00000040969	PRPF6	98	98.270	ENSMOCG00000001701	Prpf6	100	94.921	Microtus_ochrogaster
ENSRROG00000040969	PRPF6	100	88.055	ENSMMOG00000020419	prpf6	100	88.478	Mola_mola
ENSRROG00000040969	PRPF6	98	97.924	ENSMODG00000017051	PRPF6	99	98.276	Monodelphis_domestica
ENSRROG00000040969	PRPF6	98	92.561	ENSMALG00000000089	prpf6	100	88.984	Monopterus_albus
ENSRROG00000040969	PRPF6	100	88.360	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSRROG00000040969	PRPF6	98	98.270	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSRROG00000040969	PRPF6	98	98.270	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSRROG00000040969	PRPF6	98	98.270	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSRROG00000040969	PRPF6	98	97.405	ENSMPUG00000008673	PRPF6	99	97.405	Mustela_putorius_furo
ENSRROG00000040969	PRPF6	98	98.270	ENSNGAG00000003365	Prpf6	100	94.921	Nannospalax_galili
ENSRROG00000040969	PRPF6	98	92.215	ENSNBRG00000015025	prpf6	96	89.312	Neolamprologus_brichardi
ENSRROG00000040969	PRPF6	100	97.797	ENSNLEG00000010208	PRPF6	100	97.797	Nomascus_leucogenys
ENSRROG00000040969	PRPF6	100	88.270	ENSMEUG00000009824	-	90	88.270	Notamacropus_eugenii
ENSRROG00000040969	PRPF6	98	98.270	ENSODEG00000004841	PRPF6	100	89.418	Octodon_degus
ENSRROG00000040969	PRPF6	98	92.042	ENSONIG00000017406	prpf6	96	89.312	Oreochromis_niloticus
ENSRROG00000040969	PRPF6	98	98.097	ENSOANG00000004920	PRPF6	100	94.074	Ornithorhynchus_anatinus
ENSRROG00000040969	PRPF6	98	97.751	ENSOCUG00000014151	PRPF6	100	92.842	Oryctolagus_cuniculus
ENSRROG00000040969	PRPF6	98	92.215	ENSORLG00000009592	prpf6	96	88.783	Oryzias_latipes
ENSRROG00000040969	PRPF6	98	92.388	ENSORLG00020001458	prpf6	96	88.889	Oryzias_latipes_hni
ENSRROG00000040969	PRPF6	98	92.388	ENSORLG00015018762	prpf6	96	88.889	Oryzias_latipes_hsok
ENSRROG00000040969	PRPF6	98	92.215	ENSOMEG00000012174	prpf6	96	89.206	Oryzias_melastigma
ENSRROG00000040969	PRPF6	100	87.104	ENSOGAG00000007573	PRPF6	100	87.104	Otolemur_garnettii
ENSRROG00000040969	PRPF6	98	97.924	ENSOARG00000008776	PRPF6	99	93.651	Ovis_aries
ENSRROG00000040969	PRPF6	100	99.831	ENSPPAG00000008686	PRPF6	100	99.831	Pan_paniscus
ENSRROG00000040969	PRPF6	98	97.924	ENSPPRG00000008497	PRPF6	100	94.180	Panthera_pardus
ENSRROG00000040969	PRPF6	98	97.924	ENSPTIG00000011184	PRPF6	97	94.028	Panthera_tigris_altaica
ENSRROG00000040969	PRPF6	100	99.831	ENSPTRG00000013765	PRPF6	100	99.831	Pan_troglodytes
ENSRROG00000040969	PRPF6	100	99.153	ENSPANG00000024135	PRPF6	100	96.085	Papio_anubis
ENSRROG00000040969	PRPF6	98	93.599	ENSPKIG00000005627	prpf6	99	90.582	Paramormyrops_kingsleyae
ENSRROG00000040969	PRPF6	98	97.924	ENSPSIG00000007717	PRPF6	97	97.924	Pelodiscus_sinensis
ENSRROG00000040969	PRPF6	100	86.772	ENSPMGG00000008925	prpf6	96	86.984	Periophthalmus_magnuspinnatus
ENSRROG00000040969	PRPF6	98	98.097	ENSPEMG00000016036	Prpf6	100	94.921	Peromyscus_maniculatus_bairdii
ENSRROG00000040969	PRPF6	98	86.724	ENSPMAG00000006144	prpf6	99	84.550	Petromyzon_marinus
ENSRROG00000040969	PRPF6	98	98.097	ENSPCIG00000017909	PRPF6	100	94.392	Phascolarctos_cinereus
ENSRROG00000040969	PRPF6	98	92.388	ENSPFOG00000006431	prpf6	96	89.524	Poecilia_formosa
ENSRROG00000040969	PRPF6	98	92.215	ENSPLAG00000005974	prpf6	96	89.418	Poecilia_latipinna
ENSRROG00000040969	PRPF6	98	92.561	ENSPMEG00000009977	prpf6	96	89.630	Poecilia_mexicana
ENSRROG00000040969	PRPF6	98	92.561	ENSPREG00000017993	prpf6	92	89.524	Poecilia_reticulata
ENSRROG00000040969	PRPF6	100	95.979	ENSPPYG00000011256	PRPF6	100	95.979	Pongo_abelii
ENSRROG00000040969	PRPF6	98	97.924	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSRROG00000040969	PRPF6	100	98.644	ENSPCOG00000016881	PRPF6	100	94.392	Propithecus_coquereli
ENSRROG00000040969	PRPF6	95	96.182	ENSPVAG00000014316	PRPF6	100	89.066	Pteropus_vampyrus
ENSRROG00000040969	PRPF6	100	83.573	ENSPNYG00000001939	prpf6	96	77.778	Pundamilia_nyererei
ENSRROG00000040969	PRPF6	100	89.524	ENSPNAG00000015606	prpf6	96	89.947	Pygocentrus_nattereri
ENSRROG00000040969	PRPF6	98	98.270	ENSRNOG00000051498	Prpf6	100	95.026	Rattus_norvegicus
ENSRROG00000040969	PRPF6	100	100.000	ENSRBIG00000043613	PRPF6	100	100.000	Rhinopithecus_bieti
ENSRROG00000040969	PRPF6	100	95.424	ENSSBOG00000020632	PRPF6	95	95.424	Saimiri_boliviensis_boliviensis
ENSRROG00000040969	PRPF6	98	98.097	ENSSHAG00000016810	PRPF6	100	94.392	Sarcophilus_harrisii
ENSRROG00000040969	PRPF6	98	94.810	ENSSFOG00015020859	prpf6	100	90.802	Scleropages_formosus
ENSRROG00000040969	PRPF6	98	91.349	ENSSMAG00000008112	prpf6	96	88.148	Scophthalmus_maximus
ENSRROG00000040969	PRPF6	98	92.042	ENSSDUG00000016142	prpf6	96	89.206	Seriola_dumerili
ENSRROG00000040969	PRPF6	98	92.042	ENSSLDG00000025283	prpf6	100	87.086	Seriola_lalandi_dorsalis
ENSRROG00000040969	PRPF6	98	97.059	ENSSPUG00000018260	PRPF6	97	97.059	Sphenodon_punctatus
ENSRROG00000040969	PRPF6	98	92.215	ENSSPAG00000015850	prpf6	96	89.206	Stegastes_partitus
ENSRROG00000040969	PRPF6	99	97.924	ENSSSCG00000029119	PRPF6	99	97.924	Sus_scrofa
ENSRROG00000040969	PRPF6	98	97.578	ENSTGUG00000007221	PRPF6	99	93.968	Taeniopygia_guttata
ENSRROG00000040969	PRPF6	100	87.725	ENSTRUG00000002920	prpf6	96	88.148	Takifugu_rubripes
ENSRROG00000040969	PRPF6	100	81.474	ENSTNIG00000017873	prpf6	100	81.895	Tetraodon_nigroviridis
ENSRROG00000040969	PRPF6	86	98.895	ENSTBEG00000005348	PRPF6	79	98.895	Tupaia_belangeri
ENSRROG00000040969	PRPF6	98	97.578	ENSTTRG00000013068	PRPF6	100	93.545	Tursiops_truncatus
ENSRROG00000040969	PRPF6	100	97.924	ENSUMAG00000021631	PRPF6	97	97.924	Ursus_maritimus
ENSRROG00000040969	PRPF6	98	97.924	ENSVVUG00000014948	PRPF6	100	94.497	Vulpes_vulpes
ENSRROG00000040969	PRPF6	98	95.502	ENSXETG00000012054	prpf6	97	92.275	Xenopus_tropicalis
ENSRROG00000040969	PRPF6	98	92.561	ENSXCOG00000008082	prpf6	96	89.630	Xiphophorus_couchianus
ENSRROG00000040969	PRPF6	98	92.561	ENSXMAG00000015581	prpf6	96	89.630	Xiphophorus_maculatus