EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000041398 (Gene tree)
Gene ID: 104670342
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 88231 bases
Position: chrKN297135.1:176369-264599
Accession: 104670342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000035882	DND1_DSRM	PF14709.7	1.6e-24	1	1
ENSRROP00000035879	DND1_DSRM	PF14709.7	1.7e-24	1	1
ENSRROP00000035887	DND1_DSRM	PF14709.7	2.3e-17	1	1
ENSRROP00000035882	RRM_1	PF00076.22	9.3e-40	1	3
ENSRROP00000035882	RRM_1	PF00076.22	9.3e-40	2	3
ENSRROP00000035882	RRM_1	PF00076.22	9.3e-40	3	3
ENSRROP00000035879	RRM_1	PF00076.22	1.1e-39	1	3
ENSRROP00000035879	RRM_1	PF00076.22	1.1e-39	2	3
ENSRROP00000035879	RRM_1	PF00076.22	1.1e-39	3	3
ENSRROP00000035887	RRM_1	PF00076.22	1.1e-39	1	3
ENSRROP00000035887	RRM_1	PF00076.22	1.1e-39	2	3
ENSRROP00000035887	RRM_1	PF00076.22	1.1e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000060345	A1CF-203	1758	-	ENSRROP00000035887	585 (aa)	-	A0A2K6R4D8
ENSRROT00000060337	A1CF-201	2086	XM_010373535	ENSRROP00000035879	592 (aa)	XP_010371837	A0A2K6R4C7
ENSRROT00000060340	A1CF-202	1698	XM_010373537	ENSRROP00000035882	556 (aa)	XP_010371839	A0A2K6R4D5

Gene Model

Click here to download ENSRROG00000041398's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000041398's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000041398	A1CF	53	52.525	ENSRROG00000036942	HNRNPR	50	52.215
ENSRROG00000041398	A1CF	87	72.662	ENSRROG00000044288	RBM46	91	72.662
ENSRROG00000041398	A1CF	52	52.759	ENSRROG00000002583	SYNCRIP	57	51.077
ENSRROG00000041398	A1CF	74	60.000	ENSRROG00000044696	RBM47	87	68.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000041398	A1CF	100	98.151	ENSG00000148584	A1CF	100	99.502	Homo_sapiens
ENSRROG00000041398	A1CF	100	73.544	ENSAPOG00000008259	a1cf	100	73.544	Acanthochromis_polyacanthus
ENSRROG00000041398	A1CF	100	96.115	ENSAMEG00000000523	A1CF	100	96.115	Ailuropoda_melanoleuca
ENSRROG00000041398	A1CF	100	75.367	ENSACIG00000008632	a1cf	100	76.509	Amphilophus_citrinellus
ENSRROG00000041398	A1CF	100	74.220	ENSAOCG00000023744	a1cf	96	84.638	Amphiprion_ocellaris
ENSRROG00000041398	A1CF	100	75.205	ENSAPEG00000009537	a1cf	100	76.026	Amphiprion_percula
ENSRROG00000041398	A1CF	99	76.748	ENSATEG00000013720	a1cf	100	77.036	Anabas_testudineus
ENSRROG00000041398	A1CF	100	89.713	ENSAPLG00000002964	A1CF	100	89.713	Anas_platyrhynchos
ENSRROG00000041398	A1CF	99	85.507	ENSACAG00000015269	A1CF	100	83.811	Anolis_carolinensis
ENSRROG00000041398	A1CF	100	97.138	ENSANAG00000019974	A1CF	100	97.138	Aotus_nancymaae
ENSRROG00000041398	A1CF	100	73.892	ENSACLG00000017428	a1cf	100	75.369	Astatotilapia_calliptera
ENSRROG00000041398	A1CF	100	74.545	ENSAMXG00000018180	a1cf	100	74.711	Astyanax_mexicanus
ENSRROG00000041398	A1CF	100	93.950	ENSBTAG00000021195	A1CF	100	95.055	Bos_taurus
ENSRROG00000041398	A1CF	100	98.822	ENSCJAG00000005045	A1CF	100	98.822	Callithrix_jacchus
ENSRROG00000041398	A1CF	100	96.284	ENSCAFG00000015581	A1CF	100	96.284	Canis_familiaris
ENSRROG00000041398	A1CF	100	96.284	ENSCAFG00020026421	A1CF	100	96.284	Canis_lupus_dingo
ENSRROG00000041398	A1CF	100	94.958	ENSCHIG00000020411	A1CF	100	95.126	Capra_hircus
ENSRROG00000041398	A1CF	99	97.459	ENSTSYG00000001755	A1CF	100	97.459	Carlito_syrichta
ENSRROG00000041398	A1CF	90	96.694	ENSCAPG00000017386	A1CF	89	96.694	Cavia_aperea
ENSRROG00000041398	A1CF	100	96.801	ENSCPOG00000009807	A1CF	100	96.801	Cavia_porcellus
ENSRROG00000041398	A1CF	100	98.820	ENSCCAG00000018168	A1CF	100	98.820	Cebus_capucinus
ENSRROG00000041398	A1CF	100	98.311	ENSCATG00000043715	A1CF	100	98.311	Cercocebus_atys
ENSRROG00000041398	A1CF	100	96.309	ENSCLAG00000010424	A1CF	100	96.309	Chinchilla_lanigera
ENSRROG00000041398	A1CF	100	99.662	ENSCSAG00000007032	A1CF	100	99.662	Chlorocebus_sabaeus
ENSRROG00000041398	A1CF	99	94.245	ENSCHOG00000009089	A1CF	94	94.245	Choloepus_hoffmanni
ENSRROG00000041398	A1CF	100	89.376	ENSCPBG00000026464	A1CF	100	88.870	Chrysemys_picta_bellii
ENSRROG00000041398	A1CF	100	99.662	ENSCANG00000038032	A1CF	100	99.662	Colobus_angolensis_palliatus
ENSRROG00000041398	A1CF	100	94.286	ENSCGRG00001017413	A1cf	100	94.286	Cricetulus_griseus_chok1gshd
ENSRROG00000041398	A1CF	100	93.445	ENSCGRG00000017332	A1cf	100	94.118	Cricetulus_griseus_crigri
ENSRROG00000041398	A1CF	100	74.793	ENSCSEG00000002361	a1cf	100	76.119	Cynoglossus_semilaevis
ENSRROG00000041398	A1CF	100	74.593	ENSCVAG00000010520	a1cf	100	76.059	Cyprinodon_variegatus
ENSRROG00000041398	A1CF	99	79.533	ENSDARG00000002968	a1cf	100	79.599	Danio_rerio
ENSRROG00000041398	A1CF	100	95.126	ENSDNOG00000002829	A1CF	100	95.126	Dasypus_novemcinctus
ENSRROG00000041398	A1CF	83	98.047	ENSETEG00000012527	A1CF	78	98.047	Echinops_telfairi
ENSRROG00000041398	A1CF	100	96.817	ENSEASG00005012924	A1CF	100	96.817	Equus_asinus_asinus
ENSRROG00000041398	A1CF	100	96.315	ENSECAG00000010424	A1CF	100	96.315	Equus_caballus
ENSRROG00000041398	A1CF	82	81.878	ENSEEUG00000000013	A1CF	99	80.000	Erinaceus_europaeus
ENSRROG00000041398	A1CF	100	79.097	ENSELUG00000003159	a1cf	100	79.933	Esox_lucius
ENSRROG00000041398	A1CF	100	93.581	ENSFCAG00000011179	A1CF	100	93.581	Felis_catus
ENSRROG00000041398	A1CF	99	87.681	ENSFALG00000013183	A1CF	100	86.509	Ficedula_albicollis
ENSRROG00000041398	A1CF	100	94.454	ENSFDAG00000019371	A1CF	100	94.118	Fukomys_damarensis
ENSRROG00000041398	A1CF	100	69.870	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSRROG00000041398	A1CF	100	71.570	ENSGMOG00000018943	a1cf	100	71.736	Gadus_morhua
ENSRROG00000041398	A1CF	100	86.903	ENSGALG00000003765	A1CF	97	88.968	Gallus_gallus
ENSRROG00000041398	A1CF	100	70.066	ENSGAFG00000014868	a1cf	100	71.053	Gambusia_affinis
ENSRROG00000041398	A1CF	100	73.849	ENSGACG00000010241	a1cf	100	74.507	Gasterosteus_aculeatus
ENSRROG00000041398	A1CF	99	87.857	ENSGAGG00000016508	A1CF	97	88.750	Gopherus_agassizii
ENSRROG00000041398	A1CF	100	98.319	ENSGGOG00000009670	A1CF	100	98.319	Gorilla_gorilla
ENSRROG00000041398	A1CF	100	74.878	ENSHBUG00000021959	a1cf	100	76.183	Haplochromis_burtoni
ENSRROG00000041398	A1CF	100	96.471	ENSHGLG00000008955	A1CF	100	96.471	Heterocephalus_glaber_female
ENSRROG00000041398	A1CF	100	95.798	ENSHGLG00100000518	A1CF	100	95.798	Heterocephalus_glaber_male
ENSRROG00000041398	A1CF	100	70.098	ENSHCOG00000017669	a1cf	100	72.757	Hippocampus_comes
ENSRROG00000041398	A1CF	90	83.209	ENSIPUG00000010367	a1cf	96	83.209	Ictalurus_punctatus
ENSRROG00000041398	A1CF	100	76.585	ENSKMAG00000006568	a1cf	100	77.398	Kryptolebias_marmoratus
ENSRROG00000041398	A1CF	99	75.286	ENSLBEG00000020994	a1cf	98	77.100	Labrus_bergylta
ENSRROG00000041398	A1CF	100	81.711	ENSLACG00000008061	A1CF	100	81.711	Latimeria_chalumnae
ENSRROG00000041398	A1CF	100	82.915	ENSLOCG00000006302	a1cf	100	82.915	Lepisosteus_oculatus
ENSRROG00000041398	A1CF	100	94.958	ENSLAFG00000015462	A1CF	100	94.958	Loxodonta_africana
ENSRROG00000041398	A1CF	99	100.000	ENSMFAG00000035948	A1CF	100	98.649	Macaca_fascicularis
ENSRROG00000041398	A1CF	99	100.000	ENSMMUG00000007077	A1CF	100	98.649	Macaca_mulatta
ENSRROG00000041398	A1CF	100	98.311	ENSMNEG00000031454	A1CF	100	98.311	Macaca_nemestrina
ENSRROG00000041398	A1CF	100	99.662	ENSMLEG00000037223	A1CF	100	99.662	Mandrillus_leucophaeus
ENSRROG00000041398	A1CF	100	73.486	ENSMAMG00000010402	a1cf	100	75.490	Mastacembelus_armatus
ENSRROG00000041398	A1CF	100	76.047	ENSMZEG00005013245	a1cf	100	77.052	Maylandia_zebra
ENSRROG00000041398	A1CF	100	89.057	ENSMGAG00000001507	A1CF	100	89.057	Meleagris_gallopavo
ENSRROG00000041398	A1CF	100	93.445	ENSMAUG00000007422	A1cf	100	93.950	Mesocricetus_auratus
ENSRROG00000041398	A1CF	99	96.050	ENSMICG00000003377	A1CF	100	94.983	Microcebus_murinus
ENSRROG00000041398	A1CF	100	93.613	ENSMOCG00000021536	A1cf	100	93.782	Microtus_ochrogaster
ENSRROG00000041398	A1CF	100	67.488	ENSMMOG00000009422	a1cf	100	69.408	Mola_mola
ENSRROG00000041398	A1CF	92	90.275	ENSMODG00000016478	A1CF	99	90.275	Monodelphis_domestica
ENSRROG00000041398	A1CF	100	72.027	ENSMALG00000012992	a1cf	100	72.027	Monopterus_albus
ENSRROG00000041398	A1CF	100	93.277	MGP_CAROLIEiJ_G0022873	A1cf	100	93.782	Mus_caroli
ENSRROG00000041398	A1CF	100	93.277	ENSMUSG00000052595	A1cf	99	96.053	Mus_musculus
ENSRROG00000041398	A1CF	100	93.109	MGP_PahariEiJ_G0014366	A1cf	100	93.109	Mus_pahari
ENSRROG00000041398	A1CF	100	92.773	MGP_SPRETEiJ_G0023792	A1cf	100	93.277	Mus_spretus
ENSRROG00000041398	A1CF	100	90.372	ENSMPUG00000016971	A1CF	100	90.372	Mustela_putorius_furo
ENSRROG00000041398	A1CF	100	94.286	ENSMLUG00000016071	A1CF	100	94.286	Myotis_lucifugus
ENSRROG00000041398	A1CF	100	94.958	ENSNGAG00000015136	A1cf	100	95.126	Nannospalax_galili
ENSRROG00000041398	A1CF	100	75.204	ENSNBRG00000001712	a1cf	100	76.509	Neolamprologus_brichardi
ENSRROG00000041398	A1CF	100	99.160	ENSNLEG00000012028	A1CF	100	99.160	Nomascus_leucogenys
ENSRROG00000041398	A1CF	99	91.848	ENSMEUG00000015909	A1CF	100	91.667	Notamacropus_eugenii
ENSRROG00000041398	A1CF	89	85.333	ENSOPRG00000010667	A1CF	97	85.472	Ochotona_princeps
ENSRROG00000041398	A1CF	100	74.551	ENSONIG00000019105	a1cf	100	76.183	Oreochromis_niloticus
ENSRROG00000041398	A1CF	78	89.079	ENSOANG00000007360	A1CF	99	89.079	Ornithorhynchus_anatinus
ENSRROG00000041398	A1CF	100	93.121	ENSOCUG00000011587	A1CF	100	93.792	Oryctolagus_cuniculus
ENSRROG00000041398	A1CF	100	73.821	ENSORLG00000013342	a1cf	100	73.821	Oryzias_latipes
ENSRROG00000041398	A1CF	100	75.286	ENSORLG00020000586	a1cf	100	75.654	Oryzias_latipes_hni
ENSRROG00000041398	A1CF	100	75.450	ENSORLG00015018569	a1cf	100	75.817	Oryzias_latipes_hsok
ENSRROG00000041398	A1CF	99	75.747	ENSOMEG00000013531	a1cf	100	74.632	Oryzias_melastigma
ENSRROG00000041398	A1CF	100	96.115	ENSOGAG00000012884	A1CF	100	96.115	Otolemur_garnettii
ENSRROG00000041398	A1CF	100	94.790	ENSOARG00000013695	A1CF	100	94.958	Ovis_aries
ENSRROG00000041398	A1CF	99	96.797	ENSPPAG00000028115	A1CF	100	98.988	Pan_paniscus
ENSRROG00000041398	A1CF	100	95.270	ENSPPRG00000012180	A1CF	100	95.270	Panthera_pardus
ENSRROG00000041398	A1CF	100	95.270	ENSPTIG00000021223	A1CF	100	95.270	Panthera_tigris_altaica
ENSRROG00000041398	A1CF	100	98.151	ENSPTRG00000002508	A1CF	100	98.151	Pan_troglodytes
ENSRROG00000041398	A1CF	99	100.000	ENSPANG00000021988	A1CF	100	98.649	Papio_anubis
ENSRROG00000041398	A1CF	100	80.769	ENSPKIG00000025176	a1cf	100	80.602	Paramormyrops_kingsleyae
ENSRROG00000041398	A1CF	99	88.949	ENSPSIG00000010318	A1CF	100	87.521	Pelodiscus_sinensis
ENSRROG00000041398	A1CF	89	71.048	ENSPMGG00000013359	a1cf	99	67.410	Periophthalmus_magnuspinnatus
ENSRROG00000041398	A1CF	100	95.294	ENSPEMG00000015021	A1cf	100	95.126	Peromyscus_maniculatus_bairdii
ENSRROG00000041398	A1CF	100	90.051	ENSPCIG00000002175	A1CF	100	89.882	Phascolarctos_cinereus
ENSRROG00000041398	A1CF	100	75.896	ENSPFOG00000007437	-	100	77.362	Poecilia_formosa
ENSRROG00000041398	A1CF	100	76.059	ENSPFOG00000006683	a1cf	100	77.524	Poecilia_formosa
ENSRROG00000041398	A1CF	100	74.756	ENSPLAG00000001210	-	100	76.221	Poecilia_latipinna
ENSRROG00000041398	A1CF	100	74.756	ENSPLAG00000000026	a1cf	100	76.221	Poecilia_latipinna
ENSRROG00000041398	A1CF	100	68.464	ENSPMEG00000015529	-	100	69.935	Poecilia_mexicana
ENSRROG00000041398	A1CF	100	67.320	ENSPMEG00000000921	a1cf	100	68.791	Poecilia_mexicana
ENSRROG00000041398	A1CF	100	75.733	ENSPREG00000016298	a1cf	100	77.199	Poecilia_reticulata
ENSRROG00000041398	A1CF	99	99.097	ENSPPYG00000002819	A1CF	100	97.647	Pongo_abelii
ENSRROG00000041398	A1CF	83	75.431	ENSPCAG00000006463	A1CF	70	91.837	Procavia_capensis
ENSRROG00000041398	A1CF	100	96.644	ENSPCOG00000024172	A1CF	100	96.644	Propithecus_coquereli
ENSRROG00000041398	A1CF	100	76.183	ENSPNYG00000017944	a1cf	100	77.488	Pundamilia_nyererei
ENSRROG00000041398	A1CF	99	80.995	ENSPNAG00000007704	a1cf	100	79.636	Pygocentrus_nattereri
ENSRROG00000041398	A1CF	100	92.269	ENSRNOG00000033195	A1cf	100	92.773	Rattus_norvegicus
ENSRROG00000041398	A1CF	100	93.266	ENSRBIG00000042892	A1CF	100	98.800	Rhinopithecus_bieti
ENSRROG00000041398	A1CF	100	98.487	ENSSBOG00000021930	A1CF	100	98.487	Saimiri_boliviensis_boliviensis
ENSRROG00000041398	A1CF	100	90.219	ENSSHAG00000005096	A1CF	100	90.219	Sarcophilus_harrisii
ENSRROG00000041398	A1CF	99	79.893	ENSSFOG00015011774	a1cf	100	78.773	Scleropages_formosus
ENSRROG00000041398	A1CF	100	75.244	ENSSMAG00000013271	a1cf	100	75.570	Scophthalmus_maximus
ENSRROG00000041398	A1CF	100	76.451	ENSSDUG00000013930	a1cf	100	77.280	Seriola_dumerili
ENSRROG00000041398	A1CF	100	69.472	ENSSLDG00000004290	a1cf	100	70.462	Seriola_lalandi_dorsalis
ENSRROG00000041398	A1CF	100	84.615	ENSSARG00000005940	A1CF	95	85.560	Sorex_araneus
ENSRROG00000041398	A1CF	99	87.522	ENSSPUG00000006797	A1CF	95	87.809	Sphenodon_punctatus
ENSRROG00000041398	A1CF	100	95.462	ENSSSCG00000010431	A1CF	100	95.630	Sus_scrofa
ENSRROG00000041398	A1CF	100	87.625	ENSTGUG00000005090	A1CF	100	87.625	Taeniopygia_guttata
ENSRROG00000041398	A1CF	100	74.388	ENSTRUG00000001982	a1cf	100	74.388	Takifugu_rubripes
ENSRROG00000041398	A1CF	100	75.122	ENSTNIG00000003580	a1cf	100	74.797	Tetraodon_nigroviridis
ENSRROG00000041398	A1CF	100	89.803	ENSTTRG00000013190	A1CF	100	85.240	Tursiops_truncatus
ENSRROG00000041398	A1CF	100	94.764	ENSUAMG00000020065	A1CF	100	94.764	Ursus_americanus
ENSRROG00000041398	A1CF	100	95.777	ENSUMAG00000011162	A1CF	100	95.777	Ursus_maritimus
ENSRROG00000041398	A1CF	91	91.033	ENSVPAG00000006130	A1CF	86	91.033	Vicugna_pacos
ENSRROG00000041398	A1CF	100	94.257	ENSVVUG00000002504	A1CF	100	94.426	Vulpes_vulpes
ENSRROG00000041398	A1CF	100	79.062	ENSXETG00000006611	a1cf	100	78.894	Xenopus_tropicalis
ENSRROG00000041398	A1CF	100	76.066	ENSXCOG00000003302	a1cf	100	77.049	Xiphophorus_couchianus
ENSRROG00000041398	A1CF	100	77.213	ENSXMAG00000016703	a1cf	100	78.197	Xiphophorus_maculatus