EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000041407 (Gene tree)
Gene ID: 104679393
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 36829 bases
Position: chrKN298819.1:1532409-1569237
Accession: 104679393
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000036030	CPSF_A	PF03178.15	7.2e-86	1	1
ENSRROP00000036042	CPSF_A	PF03178.15	8.8e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000060489	DDB1-201	4719	XM_010384945	ENSRROP00000036030	1140 (aa)	XP_010383247	A0A2K6R4S7
ENSRROT00000060501	DDB1-202	3444	-	ENSRROP00000036042	1147 (aa)	-	A0A2K6R4T9

Gene Model

Click here to download ENSRROG00000041407's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03420	Nucleotide excision repair	KEGG
rro04120	Ubiquitin mediated proteolysis	KEGG
rro05161	Hepatitis B	KEGG
rro05170	Human immunodeficiency virus 1 infection	KEGG
rro05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000041407's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000041407	DDB1	100	100.000	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSRROG00000041407	DDB1	98	91.375	ENSAPOG00000005036	ddb1	99	91.429	Acanthochromis_polyacanthus
ENSRROG00000041407	DDB1	100	99.912	ENSAMEG00000016518	DDB1	100	99.912	Ailuropoda_melanoleuca
ENSRROG00000041407	DDB1	86	91.735	ENSACIG00000020624	ddb1	99	91.735	Amphilophus_citrinellus
ENSRROG00000041407	DDB1	100	91.053	ENSAOCG00000003066	ddb1	100	91.053	Amphiprion_ocellaris
ENSRROG00000041407	DDB1	100	91.140	ENSAPEG00000000092	ddb1	100	91.140	Amphiprion_percula
ENSRROG00000041407	DDB1	94	91.628	ENSATEG00000020571	ddb1	97	91.628	Anabas_testudineus
ENSRROG00000041407	DDB1	98	96.444	ENSAPLG00000007174	DDB1	99	96.444	Anas_platyrhynchos
ENSRROG00000041407	DDB1	100	96.930	ENSACAG00000017758	DDB1	100	96.930	Anolis_carolinensis
ENSRROG00000041407	DDB1	100	100.000	ENSANAG00000021878	DDB1	100	100.000	Aotus_nancymaae
ENSRROG00000041407	DDB1	100	91.404	ENSACLG00000012401	ddb1	100	91.404	Astatotilapia_calliptera
ENSRROG00000041407	DDB1	100	99.737	ENSBTAG00000021569	DDB1	93	99.737	Bos_taurus
ENSRROG00000041407	DDB1	100	37.211	WBGene00010890	ddb-1	100	37.126	Caenorhabditis_elegans
ENSRROG00000041407	DDB1	100	100.000	ENSCJAG00000019319	DDB1	100	100.000	Callithrix_jacchus
ENSRROG00000041407	DDB1	100	99.912	ENSCAFG00000016264	DDB1	100	99.912	Canis_familiaris
ENSRROG00000041407	DDB1	94	99.628	ENSCAFG00020012722	DDB1	99	99.628	Canis_lupus_dingo
ENSRROG00000041407	DDB1	100	99.737	ENSCHIG00000014969	DDB1	100	99.737	Capra_hircus
ENSRROG00000041407	DDB1	100	99.123	ENSTSYG00000008027	DDB1	100	99.123	Carlito_syrichta
ENSRROG00000041407	DDB1	98	99.106	ENSCAPG00000010786	DDB1	100	99.106	Cavia_aperea
ENSRROG00000041407	DDB1	100	99.123	ENSCPOG00000009956	DDB1	100	99.123	Cavia_porcellus
ENSRROG00000041407	DDB1	100	100.000	ENSCCAG00000035883	DDB1	100	100.000	Cebus_capucinus
ENSRROG00000041407	DDB1	100	99.303	ENSCATG00000044495	DDB1	100	99.303	Cercocebus_atys
ENSRROG00000041407	DDB1	100	99.211	ENSCLAG00000004126	DDB1	100	99.211	Chinchilla_lanigera
ENSRROG00000041407	DDB1	100	100.000	ENSCSAG00000006392	DDB1	100	100.000	Chlorocebus_sabaeus
ENSRROG00000041407	DDB1	88	92.803	ENSCHOG00000011377	DDB1	90	92.803	Choloepus_hoffmanni
ENSRROG00000041407	DDB1	100	97.632	ENSCPBG00000017728	DDB1	100	97.632	Chrysemys_picta_bellii
ENSRROG00000041407	DDB1	100	61.979	ENSCING00000007437	-	100	61.892	Ciona_intestinalis
ENSRROG00000041407	DDB1	94	60.276	ENSCSAVG00000004783	-	100	60.276	Ciona_savignyi
ENSRROG00000041407	DDB1	100	100.000	ENSCANG00000019948	DDB1	100	100.000	Colobus_angolensis_palliatus
ENSRROG00000041407	DDB1	100	99.825	ENSCGRG00001016599	Ddb1	100	99.825	Cricetulus_griseus_chok1gshd
ENSRROG00000041407	DDB1	100	99.825	ENSCGRG00000013427	Ddb1	100	99.825	Cricetulus_griseus_crigri
ENSRROG00000041407	DDB1	93	91.140	ENSCSEG00000012499	ddb1	99	89.575	Cynoglossus_semilaevis
ENSRROG00000041407	DDB1	94	91.333	ENSCVAG00000019531	ddb1	99	91.333	Cyprinodon_variegatus
ENSRROG00000041407	DDB1	100	88.266	ENSDARG00000074431	ddb1	100	88.384	Danio_rerio
ENSRROG00000041407	DDB1	94	99.256	ENSDNOG00000014884	DDB1	97	99.256	Dasypus_novemcinctus
ENSRROG00000041407	DDB1	93	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSRROG00000041407	DDB1	100	61.048	FBgn0260962	pic	100	60.839	Drosophila_melanogaster
ENSRROG00000041407	DDB1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSRROG00000041407	DDB1	78	84.927	ENSEBUG00000014593	ddb1	97	84.927	Eptatretus_burgeri
ENSRROG00000041407	DDB1	100	99.737	ENSEASG00005008184	DDB1	100	99.737	Equus_asinus_asinus
ENSRROG00000041407	DDB1	100	99.649	ENSECAG00000012136	DDB1	100	99.649	Equus_caballus
ENSRROG00000041407	DDB1	85	97.475	ENSEEUG00000003194	DDB1	85	97.475	Erinaceus_europaeus
ENSRROG00000041407	DDB1	100	91.140	ENSELUG00000023868	ddb1	100	91.140	Esox_lucius
ENSRROG00000041407	DDB1	100	99.912	ENSFCAG00000029716	DDB1	100	99.912	Felis_catus
ENSRROG00000041407	DDB1	100	96.850	ENSFALG00000011981	DDB1	100	96.850	Ficedula_albicollis
ENSRROG00000041407	DDB1	100	99.123	ENSFDAG00000005128	DDB1	100	99.123	Fukomys_damarensis
ENSRROG00000041407	DDB1	90	92.400	ENSFHEG00000022133	ddb1	98	92.400	Fundulus_heteroclitus
ENSRROG00000041407	DDB1	79	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSRROG00000041407	DDB1	100	97.018	ENSGALG00000042333	DDB1	100	97.018	Gallus_gallus
ENSRROG00000041407	DDB1	94	91.146	ENSGAFG00000013142	ddb1	99	91.146	Gambusia_affinis
ENSRROG00000041407	DDB1	96	90.559	ENSGACG00000017182	ddb1	100	90.559	Gasterosteus_aculeatus
ENSRROG00000041407	DDB1	95	97.694	ENSGAGG00000014124	DDB1	100	97.694	Gopherus_agassizii
ENSRROG00000041407	DDB1	100	100.000	ENSGGOG00000004052	DDB1	100	100.000	Gorilla_gorilla
ENSRROG00000041407	DDB1	100	91.404	ENSHBUG00000008873	ddb1	100	91.404	Haplochromis_burtoni
ENSRROG00000041407	DDB1	100	99.035	ENSHGLG00000018430	DDB1	100	99.035	Heterocephalus_glaber_female
ENSRROG00000041407	DDB1	100	97.982	ENSHGLG00100014475	DDB1	100	97.982	Heterocephalus_glaber_male
ENSRROG00000041407	DDB1	94	90.892	ENSHCOG00000018670	ddb1	98	90.892	Hippocampus_comes
ENSRROG00000041407	DDB1	100	90.439	ENSIPUG00000005612	DDB1	100	90.439	Ictalurus_punctatus
ENSRROG00000041407	DDB1	100	99.825	ENSSTOG00000007552	DDB1	100	99.825	Ictidomys_tridecemlineatus
ENSRROG00000041407	DDB1	100	99.649	ENSJJAG00000017769	Ddb1	100	99.649	Jaculus_jaculus
ENSRROG00000041407	DDB1	94	91.333	ENSKMAG00000002315	ddb1	99	91.333	Kryptolebias_marmoratus
ENSRROG00000041407	DDB1	85	91.399	ENSLBEG00000017065	ddb1	99	91.399	Labrus_bergylta
ENSRROG00000041407	DDB1	100	93.520	ENSLACG00000017611	DDB1	100	93.520	Latimeria_chalumnae
ENSRROG00000041407	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSRROG00000041407	DDB1	100	99.649	ENSLAFG00000011513	DDB1	100	99.649	Loxodonta_africana
ENSRROG00000041407	DDB1	100	100.000	ENSMFAG00000042035	DDB1	100	100.000	Macaca_fascicularis
ENSRROG00000041407	DDB1	99	100.000	ENSMMUG00000002691	DDB1	99	100.000	Macaca_mulatta
ENSRROG00000041407	DDB1	100	100.000	ENSMNEG00000031559	DDB1	100	100.000	Macaca_nemestrina
ENSRROG00000041407	DDB1	100	100.000	ENSMLEG00000044136	DDB1	100	100.000	Mandrillus_leucophaeus
ENSRROG00000041407	DDB1	100	91.404	ENSMAMG00000014372	ddb1	100	91.404	Mastacembelus_armatus
ENSRROG00000041407	DDB1	100	91.316	ENSMZEG00005013835	ddb1	100	91.316	Maylandia_zebra
ENSRROG00000041407	DDB1	94	96.369	ENSMGAG00000004990	DDB1	100	96.369	Meleagris_gallopavo
ENSRROG00000041407	DDB1	100	99.825	ENSMAUG00000012926	Ddb1	100	99.825	Mesocricetus_auratus
ENSRROG00000041407	DDB1	100	99.825	ENSMICG00000013703	DDB1	100	99.825	Microcebus_murinus
ENSRROG00000041407	DDB1	100	99.561	ENSMOCG00000020499	Ddb1	100	99.561	Microtus_ochrogaster
ENSRROG00000041407	DDB1	86	91.735	ENSMMOG00000001758	ddb1	99	91.735	Mola_mola
ENSRROG00000041407	DDB1	100	89.187	ENSMODG00000020353	DDB1	100	89.187	Monodelphis_domestica
ENSRROG00000041407	DDB1	100	91.404	ENSMALG00000014071	ddb1	100	91.404	Monopterus_albus
ENSRROG00000041407	DDB1	100	99.737	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.737	Mus_caroli
ENSRROG00000041407	DDB1	100	99.649	ENSMUSG00000024740	Ddb1	100	99.649	Mus_musculus
ENSRROG00000041407	DDB1	100	99.737	MGP_PahariEiJ_G0014189	Ddb1	100	99.737	Mus_pahari
ENSRROG00000041407	DDB1	100	99.737	MGP_SPRETEiJ_G0023609	Ddb1	100	99.737	Mus_spretus
ENSRROG00000041407	DDB1	100	96.579	ENSMPUG00000014200	DDB1	100	96.579	Mustela_putorius_furo
ENSRROG00000041407	DDB1	100	99.298	ENSMLUG00000013232	DDB1	100	99.298	Myotis_lucifugus
ENSRROG00000041407	DDB1	100	99.386	ENSNGAG00000009384	Ddb1	100	99.386	Nannospalax_galili
ENSRROG00000041407	DDB1	100	91.491	ENSNBRG00000019581	ddb1	100	91.491	Neolamprologus_brichardi
ENSRROG00000041407	DDB1	100	98.518	ENSNLEG00000002022	DDB1	100	98.518	Nomascus_leucogenys
ENSRROG00000041407	DDB1	91	99.648	ENSMEUG00000001099	DDB1	93	99.648	Notamacropus_eugenii
ENSRROG00000041407	DDB1	90	90.980	ENSOPRG00000008254	DDB1	90	90.980	Ochotona_princeps
ENSRROG00000041407	DDB1	100	99.035	ENSODEG00000002419	DDB1	100	99.035	Octodon_degus
ENSRROG00000041407	DDB1	100	91.404	ENSONIG00000005804	ddb1	100	91.404	Oreochromis_niloticus
ENSRROG00000041407	DDB1	91	98.062	ENSOANG00000004897	DDB1	100	98.062	Ornithorhynchus_anatinus
ENSRROG00000041407	DDB1	100	99.825	ENSOCUG00000001667	DDB1	100	99.825	Oryctolagus_cuniculus
ENSRROG00000041407	DDB1	96	89.826	ENSORLG00000001399	ddb1	98	91.066	Oryzias_latipes
ENSRROG00000041407	DDB1	96	89.734	ENSORLG00020001277	ddb1	97	89.734	Oryzias_latipes_hni
ENSRROG00000041407	DDB1	94	90.884	ENSORLG00015002080	ddb1	99	90.884	Oryzias_latipes_hsok
ENSRROG00000041407	DDB1	96	89.699	ENSOMEG00000006181	ddb1	99	89.699	Oryzias_melastigma
ENSRROG00000041407	DDB1	100	99.649	ENSOGAG00000016103	DDB1	100	99.649	Otolemur_garnettii
ENSRROG00000041407	DDB1	99	99.733	ENSOARG00000011716	DDB1	98	99.733	Ovis_aries
ENSRROG00000041407	DDB1	100	100.000	ENSPPAG00000035343	DDB1	100	100.000	Pan_paniscus
ENSRROG00000041407	DDB1	100	99.912	ENSPPRG00000013300	DDB1	100	99.912	Panthera_pardus
ENSRROG00000041407	DDB1	98	99.911	ENSPTIG00000006909	DDB1	98	99.911	Panthera_tigris_altaica
ENSRROG00000041407	DDB1	100	100.000	ENSPTRG00000003737	DDB1	100	100.000	Pan_troglodytes
ENSRROG00000041407	DDB1	100	100.000	ENSPANG00000000242	DDB1	100	100.000	Papio_anubis
ENSRROG00000041407	DDB1	94	91.240	ENSPKIG00000019213	ddb1	94	91.240	Paramormyrops_kingsleyae
ENSRROG00000041407	DDB1	98	96.975	ENSPSIG00000013275	DDB1	100	96.975	Pelodiscus_sinensis
ENSRROG00000041407	DDB1	86	91.429	ENSPMGG00000021179	ddb1	99	91.429	Periophthalmus_magnuspinnatus
ENSRROG00000041407	DDB1	100	99.825	ENSPEMG00000012241	Ddb1	100	99.825	Peromyscus_maniculatus_bairdii
ENSRROG00000041407	DDB1	89	86.739	ENSPMAG00000008479	ddb1	100	86.739	Petromyzon_marinus
ENSRROG00000041407	DDB1	100	98.947	ENSPCIG00000002643	DDB1	100	98.947	Phascolarctos_cinereus
ENSRROG00000041407	DDB1	100	90.798	ENSPFOG00000002768	ddb1	100	90.798	Poecilia_formosa
ENSRROG00000041407	DDB1	100	90.614	ENSPLAG00000017227	ddb1	100	90.614	Poecilia_latipinna
ENSRROG00000041407	DDB1	100	90.614	ENSPMEG00000011398	ddb1	100	90.614	Poecilia_mexicana
ENSRROG00000041407	DDB1	94	91.256	ENSPREG00000004440	ddb1	98	91.256	Poecilia_reticulata
ENSRROG00000041407	DDB1	100	95.026	ENSPPYG00000003193	DDB1	100	95.026	Pongo_abelii
ENSRROG00000041407	DDB1	85	99.403	ENSPCAG00000011040	DDB1	85	99.403	Procavia_capensis
ENSRROG00000041407	DDB1	100	98.249	ENSPCOG00000015176	DDB1	100	98.249	Propithecus_coquereli
ENSRROG00000041407	DDB1	100	99.737	ENSPVAG00000003847	DDB1	100	99.737	Pteropus_vampyrus
ENSRROG00000041407	DDB1	94	91.240	ENSPNAG00000006635	ddb1	97	91.240	Pygocentrus_nattereri
ENSRROG00000041407	DDB1	100	99.737	ENSRNOG00000020715	Ddb1	100	99.737	Rattus_norvegicus
ENSRROG00000041407	DDB1	100	100.000	ENSRBIG00000033611	DDB1	100	100.000	Rhinopithecus_bieti
ENSRROG00000041407	DDB1	100	99.912	ENSSBOG00000019775	DDB1	100	99.912	Saimiri_boliviensis_boliviensis
ENSRROG00000041407	DDB1	94	96.916	ENSSHAG00000011600	DDB1	100	96.916	Sarcophilus_harrisii
ENSRROG00000041407	DDB1	94	91.357	ENSSFOG00015011151	ddb1	97	91.357	Scleropages_formosus
ENSRROG00000041407	DDB1	100	90.965	ENSSMAG00000009495	ddb1	100	90.965	Scophthalmus_maximus
ENSRROG00000041407	DDB1	100	91.316	ENSSDUG00000004642	ddb1	100	91.316	Seriola_dumerili
ENSRROG00000041407	DDB1	100	91.316	ENSSLDG00000015804	ddb1	100	91.316	Seriola_lalandi_dorsalis
ENSRROG00000041407	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSRROG00000041407	DDB1	100	97.807	ENSSPUG00000019338	DDB1	100	97.807	Sphenodon_punctatus
ENSRROG00000041407	DDB1	94	91.535	ENSSPAG00000009888	ddb1	99	91.535	Stegastes_partitus
ENSRROG00000041407	DDB1	100	98.860	ENSSSCG00000013094	DDB1	100	98.860	Sus_scrofa
ENSRROG00000041407	DDB1	100	97.018	ENSTGUG00000006414	DDB1	100	97.018	Taeniopygia_guttata
ENSRROG00000041407	DDB1	94	90.214	ENSTRUG00000016682	ddb1	98	90.214	Takifugu_rubripes
ENSRROG00000041407	DDB1	88	84.930	ENSTNIG00000009565	ddb1	99	84.930	Tetraodon_nigroviridis
ENSRROG00000041407	DDB1	92	94.778	ENSTTRG00000011055	DDB1	94	94.778	Tursiops_truncatus
ENSRROG00000041407	DDB1	94	99.628	ENSUAMG00000017793	DDB1	93	99.628	Ursus_americanus
ENSRROG00000041407	DDB1	94	99.628	ENSUMAG00000011788	DDB1	98	99.628	Ursus_maritimus
ENSRROG00000041407	DDB1	90	100.000	ENSVPAG00000007963	DDB1	92	100.000	Vicugna_pacos
ENSRROG00000041407	DDB1	100	99.825	ENSVVUG00000004987	DDB1	100	99.825	Vulpes_vulpes
ENSRROG00000041407	DDB1	100	93.182	ENSXETG00000008820	ddb1	100	93.182	Xenopus_tropicalis
ENSRROG00000041407	DDB1	86	91.224	ENSXCOG00000013956	ddb1	99	91.224	Xiphophorus_couchianus
ENSRROG00000041407	DDB1	94	91.146	ENSXMAG00000000022	ddb1	99	91.146	Xiphophorus_maculatus