EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000041642 (Gene tree)
Gene ID: 104654196
Gene Symbol: HNRNPU
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 10792 bases
Position: chrKN299427.1:1913896-1924687
Accession: 104654196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000036685	SAP	PF02037.27	4e-10	1	1
ENSRROP00000036667	SAP	PF02037.27	4.6e-10	1	1
ENSRROP00000036641	SAP	PF02037.27	4.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000061130	HNRNPU-202	2412	-	ENSRROP00000036667	803 (aa)	-	A0A2K6R6L0
ENSRROT00000061104	HNRNPU-201	3861	XM_010353284	ENSRROP00000036641	806 (aa)	XP_010351586	A0A2K6R6I7
ENSRROT00000061148	HNRNPU-203	2184	-	ENSRROP00000036685	727 (aa)	-	A0A2K6R6N4

Gene Model

Click here to download ENSRROG00000041642's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000041642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000041642	HNRNPU	77	47.895	ENSRROG00000036561	-	92	45.098
ENSRROG00000041642	HNRNPU	85	49.762	ENSRROG00000030124	HNRNPUL1	56	62.766

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000041642	HNRNPU	100	99.380	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSRROG00000041642	HNRNPU	98	54.733	ENSAPOG00000017400	hnrnpub	83	58.171	Acanthochromis_polyacanthus
ENSRROG00000041642	HNRNPU	100	95.615	ENSAMEG00000009145	HNRNPU	100	95.615	Ailuropoda_melanoleuca
ENSRROG00000041642	HNRNPU	98	56.104	ENSACIG00000012138	hnrnpub	87	80.952	Amphilophus_citrinellus
ENSRROG00000041642	HNRNPU	98	54.050	ENSAOCG00000015843	hnrnpub	83	58.471	Amphiprion_ocellaris
ENSRROG00000041642	HNRNPU	98	54.050	ENSAPEG00000014679	hnrnpub	83	58.471	Amphiprion_percula
ENSRROG00000041642	HNRNPU	98	56.121	ENSATEG00000016178	hnrnpub	92	53.837	Anabas_testudineus
ENSRROG00000041642	HNRNPU	85	82.421	ENSACAG00000004511	HNRNPU	100	74.323	Anolis_carolinensis
ENSRROG00000041642	HNRNPU	100	99.504	ENSANAG00000033895	-	100	99.504	Aotus_nancymaae
ENSRROG00000041642	HNRNPU	76	61.552	ENSACLG00000008165	hnrnpub	82	56.109	Astatotilapia_calliptera
ENSRROG00000041642	HNRNPU	98	98.099	ENSBTAG00000007606	HNRNPU	98	98.099	Bos_taurus
ENSRROG00000041642	HNRNPU	100	98.762	ENSCJAG00000016914	HNRNPU	100	98.762	Callithrix_jacchus
ENSRROG00000041642	HNRNPU	100	98.387	ENSCAFG00020000918	HNRNPU	100	98.387	Canis_lupus_dingo
ENSRROG00000041642	HNRNPU	100	98.139	ENSCHIG00000004900	HNRNPU	100	98.139	Capra_hircus
ENSRROG00000041642	HNRNPU	100	95.394	ENSCPOG00000011887	HNRNPU	100	95.394	Cavia_porcellus
ENSRROG00000041642	HNRNPU	100	98.900	ENSCCAG00000037859	-	100	98.900	Cebus_capucinus
ENSRROG00000041642	HNRNPU	100	99.175	ENSCATG00000035273	HNRNPU	100	99.175	Cercocebus_atys
ENSRROG00000041642	HNRNPU	100	95.636	ENSCLAG00000007100	HNRNPU	100	95.636	Chinchilla_lanigera
ENSRROG00000041642	HNRNPU	100	99.752	ENSCSAG00000009219	HNRNPU	100	99.752	Chlorocebus_sabaeus
ENSRROG00000041642	HNRNPU	83	100.000	ENSCHOG00000001387	HNRNPU	79	100.000	Choloepus_hoffmanni
ENSRROG00000041642	HNRNPU	100	77.897	ENSCPBG00000009415	HNRNPU	98	80.528	Chrysemys_picta_bellii
ENSRROG00000041642	HNRNPU	100	98.487	ENSCANG00000022780	HNRNPU	100	98.487	Colobus_angolensis_palliatus
ENSRROG00000041642	HNRNPU	100	96.154	ENSCGRG00001020525	Hnrnpu	100	96.154	Cricetulus_griseus_chok1gshd
ENSRROG00000041642	HNRNPU	76	59.022	ENSCSEG00000010804	hnrnpub	98	59.316	Cynoglossus_semilaevis
ENSRROG00000041642	HNRNPU	81	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
ENSRROG00000041642	HNRNPU	79	85.714	ENSDARG00000004735	hnrnpub	94	57.663	Danio_rerio
ENSRROG00000041642	HNRNPU	81	62.319	ENSDARG00000015206	hnrnpua	95	58.909	Danio_rerio
ENSRROG00000041642	HNRNPU	80	100.000	ENSDNOG00000000215	HNRNPU	88	100.000	Dasypus_novemcinctus
ENSRROG00000041642	HNRNPU	100	91.935	ENSDORG00000015491	Hnrnpu	100	92.060	Dipodomys_ordii
ENSRROG00000041642	HNRNPU	100	93.548	ENSETEG00000014565	HNRNPU	100	92.928	Echinops_telfairi
ENSRROG00000041642	HNRNPU	100	98.015	ENSEASG00005003017	HNRNPU	100	98.015	Equus_asinus_asinus
ENSRROG00000041642	HNRNPU	100	97.767	ENSECAG00000007955	HNRNPU	100	97.767	Equus_caballus
ENSRROG00000041642	HNRNPU	98	57.724	ENSELUG00000010733	hnrnpub	82	57.050	Esox_lucius
ENSRROG00000041642	HNRNPU	99	50.369	ENSELUG00000011966	hnrnpua	67	72.549	Esox_lucius
ENSRROG00000041642	HNRNPU	100	98.511	ENSFCAG00000002156	HNRNPU	99	98.511	Felis_catus
ENSRROG00000041642	HNRNPU	90	98.822	ENSFDAG00000006026	HNRNPU	100	98.822	Fukomys_damarensis
ENSRROG00000041642	HNRNPU	82	69.643	ENSFHEG00000022639	hnrnpub	83	54.386	Fundulus_heteroclitus
ENSRROG00000041642	HNRNPU	92	57.287	ENSGMOG00000001755	hnrnpub	78	60.032	Gadus_morhua
ENSRROG00000041642	HNRNPU	95	88.889	ENSGALG00000010671	HNRNPU	100	77.948	Gallus_gallus
ENSRROG00000041642	HNRNPU	75	53.744	ENSGAFG00000009369	hnrnpub	99	48.919	Gambusia_affinis
ENSRROG00000041642	HNRNPU	78	59.105	ENSGACG00000004679	hnrnpub	99	53.317	Gasterosteus_aculeatus
ENSRROG00000041642	HNRNPU	100	98.349	ENSGGOG00000004061	HNRNPU	100	98.349	Gorilla_gorilla
ENSRROG00000041642	HNRNPU	76	61.552	ENSHBUG00000012290	hnrnpub	82	55.807	Haplochromis_burtoni
ENSRROG00000041642	HNRNPU	100	97.519	ENSHGLG00000010594	-	100	97.519	Heterocephalus_glaber_female
ENSRROG00000041642	HNRNPU	90	99.158	ENSHGLG00100015093	HNRNPU	100	99.160	Heterocephalus_glaber_male
ENSRROG00000041642	HNRNPU	79	57.046	ENSHCOG00000020091	hnrnpub	80	53.134	Hippocampus_comes
ENSRROG00000041642	HNRNPU	80	78.261	ENSIPUG00000007749	hnrnpu	92	72.549	Ictalurus_punctatus
ENSRROG00000041642	HNRNPU	100	94.526	ENSJJAG00000011371	Hnrnpu	100	94.526	Jaculus_jaculus
ENSRROG00000041642	HNRNPU	95	52.789	ENSKMAG00000004532	hnrnpub	85	55.846	Kryptolebias_marmoratus
ENSRROG00000041642	HNRNPU	76	60.885	ENSLBEG00000022520	hnrnpub	82	56.930	Labrus_bergylta
ENSRROG00000041642	HNRNPU	99	62.408	ENSLACG00000017463	HNRNPU	99	63.119	Latimeria_chalumnae
ENSRROG00000041642	HNRNPU	82	80.435	ENSLOCG00000016652	hnrnpua	99	58.960	Lepisosteus_oculatus
ENSRROG00000041642	HNRNPU	100	96.389	ENSLAFG00000021377	HNRNPU	100	96.389	Loxodonta_africana
ENSRROG00000041642	HNRNPU	100	99.175	ENSMFAG00000037308	HNRNPU	100	99.175	Macaca_fascicularis
ENSRROG00000041642	HNRNPU	100	99.752	ENSMMUG00000021098	HNRNPU	100	99.752	Macaca_mulatta
ENSRROG00000041642	HNRNPU	100	99.175	ENSMNEG00000043645	HNRNPU	100	99.175	Macaca_nemestrina
ENSRROG00000041642	HNRNPU	76	61.023	ENSMAMG00000007196	hnrnpub	82	57.357	Mastacembelus_armatus
ENSRROG00000041642	HNRNPU	76	61.552	ENSMZEG00005003185	hnrnpub	82	56.259	Maylandia_zebra
ENSRROG00000041642	HNRNPU	100	96.154	ENSMAUG00000008842	Hnrnpu	100	96.154	Mesocricetus_auratus
ENSRROG00000041642	HNRNPU	100	97.883	ENSMICG00000004616	HNRNPU	100	97.883	Microcebus_murinus
ENSRROG00000041642	HNRNPU	100	96.030	ENSMOCG00000015623	Hnrnpu	100	96.030	Microtus_ochrogaster
ENSRROG00000041642	HNRNPU	100	89.647	ENSMODG00000006515	HNRNPU	100	89.882	Monodelphis_domestica
ENSRROG00000041642	HNRNPU	78	70.588	ENSMALG00000018243	hnrnpub	86	60.596	Monopterus_albus
ENSRROG00000041642	HNRNPU	100	96.035	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	96.035	Mus_caroli
ENSRROG00000041642	HNRNPU	100	96.159	ENSMUSG00000039630	Hnrnpu	100	96.159	Mus_musculus
ENSRROG00000041642	HNRNPU	100	94.678	MGP_PahariEiJ_G0028193	Hnrnpu	100	95.050	Mus_pahari
ENSRROG00000041642	HNRNPU	100	96.159	MGP_SPRETEiJ_G0015761	Hnrnpu	100	96.159	Mus_spretus
ENSRROG00000041642	HNRNPU	100	89.467	ENSMLUG00000000475	HNRNPU	100	88.999	Myotis_lucifugus
ENSRROG00000041642	HNRNPU	100	96.526	ENSNGAG00000019075	Hnrnpu	100	96.526	Nannospalax_galili
ENSRROG00000041642	HNRNPU	76	61.023	ENSNBRG00000017855	hnrnpub	82	55.958	Neolamprologus_brichardi
ENSRROG00000041642	HNRNPU	99	87.198	ENSMEUG00000000541	HNRNPU	100	87.319	Notamacropus_eugenii
ENSRROG00000041642	HNRNPU	70	97.087	ENSODEG00000014458	-	100	97.087	Octodon_degus
ENSRROG00000041642	HNRNPU	81	83.333	ENSONIG00000001260	hnrnpub	88	83.333	Oreochromis_niloticus
ENSRROG00000041642	HNRNPU	98	95.916	ENSOCUG00000014469	HNRNPU	93	95.916	Oryctolagus_cuniculus
ENSRROG00000041642	HNRNPU	98	56.327	ENSORLG00000016114	hnrnpub	83	53.924	Oryzias_latipes
ENSRROG00000041642	HNRNPU	76	61.376	ENSORLG00020005363	hnrnpub	83	53.857	Oryzias_latipes_hni
ENSRROG00000041642	HNRNPU	76	61.199	ENSORLG00015001190	hnrnpub	83	53.712	Oryzias_latipes_hsok
ENSRROG00000041642	HNRNPU	76	59.965	ENSOMEG00000014951	hnrnpub	85	55.633	Oryzias_melastigma
ENSRROG00000041642	HNRNPU	100	98.263	ENSOGAG00000014024	HNRNPU	100	98.263	Otolemur_garnettii
ENSRROG00000041642	HNRNPU	83	100.000	ENSOARG00000004985	HNRNPU	92	98.826	Ovis_aries
ENSRROG00000041642	HNRNPU	100	98.900	ENSPPAG00000038652	HNRNPU	100	98.900	Pan_paniscus
ENSRROG00000041642	HNRNPU	100	96.242	ENSPPRG00000002662	HNRNPU	100	96.242	Panthera_pardus
ENSRROG00000041642	HNRNPU	100	98.900	ENSPTRG00000002182	HNRNPU	100	98.900	Pan_troglodytes
ENSRROG00000041642	HNRNPU	100	99.752	ENSPANG00000011643	HNRNPU	100	99.752	Papio_anubis
ENSRROG00000041642	HNRNPU	98	60.519	ENSPKIG00000006885	hnrnpua	93	58.149	Paramormyrops_kingsleyae
ENSRROG00000041642	HNRNPU	98	61.644	ENSPKIG00000022332	hnrnpub	78	64.706	Paramormyrops_kingsleyae
ENSRROG00000041642	HNRNPU	100	91.885	ENSPCIG00000008657	HNRNPU	100	91.408	Phascolarctos_cinereus
ENSRROG00000041642	HNRNPU	75	53.744	ENSPFOG00000002908	hnrnpub	85	54.422	Poecilia_formosa
ENSRROG00000041642	HNRNPU	75	54.038	ENSPLAG00000004160	hnrnpub	85	54.570	Poecilia_latipinna
ENSRROG00000041642	HNRNPU	100	94.293	ENSPCOG00000003883	-	100	94.293	Propithecus_coquereli
ENSRROG00000041642	HNRNPU	100	97.896	ENSPCOG00000018655	-	100	97.896	Propithecus_coquereli
ENSRROG00000041642	HNRNPU	100	95.636	ENSPVAG00000002581	HNRNPU	100	95.636	Pteropus_vampyrus
ENSRROG00000041642	HNRNPU	76	61.728	ENSPNYG00000021642	hnrnpub	82	56.410	Pundamilia_nyererei
ENSRROG00000041642	HNRNPU	98	61.022	ENSPNAG00000001055	hnrnpub	86	60.982	Pygocentrus_nattereri
ENSRROG00000041642	HNRNPU	100	95.776	ENSRNOG00000033790	Hnrnpu	100	95.782	Rattus_norvegicus
ENSRROG00000041642	HNRNPU	100	98.630	ENSRBIG00000031519	HNRNPU	100	98.630	Rhinopithecus_bieti
ENSRROG00000041642	HNRNPU	98	61.486	ENSSFOG00015019004	hnrnpu	98	59.343	Scleropages_formosus
ENSRROG00000041642	HNRNPU	98	61.096	ENSSFOG00015001124	hnrnpub	78	65.683	Scleropages_formosus
ENSRROG00000041642	HNRNPU	76	61.770	ENSSMAG00000003607	hnrnpub	79	56.994	Scophthalmus_maximus
ENSRROG00000041642	HNRNPU	76	60.847	ENSSDUG00000005912	hnrnpub	81	55.362	Seriola_dumerili
ENSRROG00000041642	HNRNPU	76	60.670	ENSSLDG00000004899	hnrnpub	81	55.217	Seriola_lalandi_dorsalis
ENSRROG00000041642	HNRNPU	100	79.426	ENSSPUG00000011393	HNRNPU	100	79.880	Sphenodon_punctatus
ENSRROG00000041642	HNRNPU	76	61.062	ENSSPAG00000011853	hnrnpub	83	57.721	Stegastes_partitus
ENSRROG00000041642	HNRNPU	100	98.387	ENSSSCG00000010877	HNRNPU	100	98.387	Sus_scrofa
ENSRROG00000041642	HNRNPU	99	55.376	ENSTRUG00000007759	hnrnpub	81	57.057	Takifugu_rubripes
ENSRROG00000041642	HNRNPU	99	51.369	ENSTNIG00000009725	hnrnpub	92	68.085	Tetraodon_nigroviridis
ENSRROG00000041642	HNRNPU	70	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSRROG00000041642	HNRNPU	100	96.364	ENSUAMG00000021120	HNRNPU	100	96.364	Ursus_americanus
ENSRROG00000041642	HNRNPU	98	88.734	ENSUMAG00000012322	HNRNPU	98	94.595	Ursus_maritimus
ENSRROG00000041642	HNRNPU	83	96.396	ENSVPAG00000010520	HNRNPU	91	96.396	Vicugna_pacos
ENSRROG00000041642	HNRNPU	100	98.387	ENSVVUG00000026524	HNRNPU	100	98.387	Vulpes_vulpes
ENSRROG00000041642	HNRNPU	99	65.833	ENSXETG00000011386	hnrnpu	99	69.119	Xenopus_tropicalis
ENSRROG00000041642	HNRNPU	75	54.038	ENSXMAG00000010356	hnrnpub	86	54.212	Xiphophorus_maculatus