EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000042232 (Gene tree)
Gene ID: 104671572
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC104671572
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 47142 bases
Position: chrKN297319.1:24013-71154
Accession: 104671572
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000037639	RNA_pol_L_2	PF13656.6	6.7e-28	1	1
ENSRROP00000037639	RNA_pol_L	PF01193.24	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000062101	-	2626	XM_010375081	ENSRROP00000037629	122 (aa)	XP_010373383	A0A2K6R9A8
ENSRROT00000062104	-	129	-	ENSRROP00000037632	42 (aa)	-	A0A2K6R9B4
ENSRROT00000062111	-	1362	XM_010375080	ENSRROP00000037639	133 (aa)	XP_010373382	A0A2K6R9B8

Gene Model

Click here to download ENSRROG00000042232's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03020	RNA polymerase	KEGG
rro04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000042232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000042232	-	75	33.000	ENSRROG00000035578	-	87	33.000
ENSRROG00000042232	-	100	94.737	ENSRROG00000026751	-	100	94.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000042232	-	100	99.248	ENSG00000186184	POLR1D	100	99.248	Homo_sapiens
ENSRROG00000042232	-	83	67.568	ENSAPOG00000021882	polr1d	98	67.568	Acanthochromis_polyacanthus
ENSRROG00000042232	-	94	97.600	ENSAMEG00000019095	POLR1D	100	97.600	Ailuropoda_melanoleuca
ENSRROG00000042232	-	75	75.000	ENSACIG00000013328	polr1d	87	75.000	Amphilophus_citrinellus
ENSRROG00000042232	-	84	66.964	ENSAOCG00000018500	polr1d	98	66.964	Amphiprion_ocellaris
ENSRROG00000042232	-	84	66.071	ENSAPEG00000009489	polr1d	98	66.071	Amphiprion_percula
ENSRROG00000042232	-	80	67.290	ENSATEG00000019322	polr1d	94	67.290	Anabas_testudineus
ENSRROG00000042232	-	83	65.766	ENSACAG00000015753	POLR1D	96	65.766	Anolis_carolinensis
ENSRROG00000042232	-	100	97.744	ENSANAG00000024486	POLR1D	100	97.744	Aotus_nancymaae
ENSRROG00000042232	-	77	74.510	ENSACLG00000023805	polr1d	94	71.028	Astatotilapia_calliptera
ENSRROG00000042232	-	80	68.868	ENSAMXG00000036118	polr1d	92	68.868	Astyanax_mexicanus
ENSRROG00000042232	-	100	93.985	ENSBTAG00000008642	POLR1D	100	93.985	Bos_taurus
ENSRROG00000042232	-	100	93.985	ENSBTAG00000033252	-	100	93.985	Bos_taurus
ENSRROG00000042232	-	62	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSRROG00000042232	-	100	96.992	ENSCJAG00000044669	POLR1D	100	96.992	Callithrix_jacchus
ENSRROG00000042232	-	100	97.744	ENSCAFG00000006755	POLR1D	100	97.744	Canis_familiaris
ENSRROG00000042232	-	100	94.737	ENSCHIG00000021910	POLR1D	100	94.737	Capra_hircus
ENSRROG00000042232	-	96	83.846	ENSTSYG00000034852	-	98	84.034	Carlito_syrichta
ENSRROG00000042232	-	93	93.548	ENSTSYG00000026817	-	93	93.548	Carlito_syrichta
ENSRROG00000042232	-	96	53.906	ENSCAPG00000006058	-	99	53.906	Cavia_aperea
ENSRROG00000042232	-	96	54.688	ENSCPOG00000030450	-	99	54.688	Cavia_porcellus
ENSRROG00000042232	-	100	96.992	ENSCCAG00000021349	-	100	96.992	Cebus_capucinus
ENSRROG00000042232	-	100	78.195	ENSCCAG00000020191	-	100	78.195	Cebus_capucinus
ENSRROG00000042232	-	100	87.218	ENSCATG00000022900	-	100	87.218	Cercocebus_atys
ENSRROG00000042232	-	100	99.248	ENSCATG00000030710	-	100	99.248	Cercocebus_atys
ENSRROG00000042232	-	93	95.968	ENSCLAG00000017623	POLR1D	100	95.968	Chinchilla_lanigera
ENSRROG00000042232	-	73	78.351	ENSCPBG00000004719	POLR1D	96	78.351	Chrysemys_picta_bellii
ENSRROG00000042232	-	100	99.248	ENSCANG00000028632	-	100	99.248	Colobus_angolensis_palliatus
ENSRROG00000042232	-	100	94.737	ENSCANG00000037694	-	100	94.737	Colobus_angolensis_palliatus
ENSRROG00000042232	-	100	96.241	ENSCGRG00001021251	Polr1d	100	96.241	Cricetulus_griseus_chok1gshd
ENSRROG00000042232	-	100	96.241	ENSCGRG00000011639	Polr1d	100	96.241	Cricetulus_griseus_crigri
ENSRROG00000042232	-	78	70.192	ENSCSEG00000018268	polr1d	91	69.159	Cynoglossus_semilaevis
ENSRROG00000042232	-	79	71.429	ENSCVAG00000018527	polr1d	92	71.429	Cyprinodon_variegatus
ENSRROG00000042232	-	83	66.364	ENSDARG00000037570	polr1d	98	66.364	Danio_rerio
ENSRROG00000042232	-	100	95.489	ENSDNOG00000043676	-	100	95.489	Dasypus_novemcinctus
ENSRROG00000042232	-	100	93.284	ENSDNOG00000046247	-	100	93.284	Dasypus_novemcinctus
ENSRROG00000042232	-	100	94.737	ENSDORG00000029155	Polr1d	100	94.737	Dipodomys_ordii
ENSRROG00000042232	-	65	43.023	FBgn0086447	l(2)37Cg	81	43.023	Drosophila_melanogaster
ENSRROG00000042232	-	93	91.129	ENSETEG00000012797	POLR1D	100	91.129	Echinops_telfairi
ENSRROG00000042232	-	65	72.093	ENSEBUG00000011748	polr1d	60	72.093	Eptatretus_burgeri
ENSRROG00000042232	-	96	96.875	ENSEASG00005022487	POLR1D	99	96.875	Equus_asinus_asinus
ENSRROG00000042232	-	93	95.968	ENSEEUG00000013144	POLR1D	100	95.968	Erinaceus_europaeus
ENSRROG00000042232	-	80	67.925	ENSELUG00000005105	rpac2	93	67.925	Esox_lucius
ENSRROG00000042232	-	100	97.744	ENSFCAG00000030162	POLR1D	100	97.744	Felis_catus
ENSRROG00000042232	-	72	76.042	ENSFALG00000011463	POLR1D	95	76.042	Ficedula_albicollis
ENSRROG00000042232	-	100	96.241	ENSFDAG00000004463	POLR1D	100	96.241	Fukomys_damarensis
ENSRROG00000042232	-	82	72.727	ENSFHEG00000015410	polr1d	96	72.727	Fundulus_heteroclitus
ENSRROG00000042232	-	79	72.381	ENSGAFG00000001693	polr1d	92	72.381	Gambusia_affinis
ENSRROG00000042232	-	88	68.644	ENSGACG00000018585	polr1d	100	68.644	Gasterosteus_aculeatus
ENSRROG00000042232	-	81	76.852	ENSGAGG00000008503	POLR1D	95	76.852	Gopherus_agassizii
ENSRROG00000042232	-	100	99.248	ENSGGOG00000004235	POLR1D	100	99.248	Gorilla_gorilla
ENSRROG00000042232	-	80	71.028	ENSHBUG00000002111	polr1d	94	71.028	Haplochromis_burtoni
ENSRROG00000042232	-	100	94.737	ENSHGLG00000003202	POLR1D	100	94.737	Heterocephalus_glaber_female
ENSRROG00000042232	-	100	94.737	ENSHGLG00100009393	POLR1D	100	94.737	Heterocephalus_glaber_male
ENSRROG00000042232	-	80	69.159	ENSHCOG00000003258	polr1d	94	69.159	Hippocampus_comes
ENSRROG00000042232	-	79	73.333	ENSIPUG00000014810	polr1d	91	73.333	Ictalurus_punctatus
ENSRROG00000042232	-	100	98.496	ENSSTOG00000013877	POLR1D	100	98.496	Ictidomys_tridecemlineatus
ENSRROG00000042232	-	97	90.226	ENSJJAG00000022671	-	100	93.333	Jaculus_jaculus
ENSRROG00000042232	-	95	75.397	ENSJJAG00000021667	-	75	75.397	Jaculus_jaculus
ENSRROG00000042232	-	80	66.981	ENSKMAG00000015256	polr1d	93	66.981	Kryptolebias_marmoratus
ENSRROG00000042232	-	79	72.381	ENSLBEG00000015919	polr1d	92	72.381	Labrus_bergylta
ENSRROG00000042232	-	87	65.517	ENSLACG00000006810	POLR1D	96	65.517	Latimeria_chalumnae
ENSRROG00000042232	-	54	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSRROG00000042232	-	100	90.226	ENSLAFG00000032290	POLR1D	100	90.226	Loxodonta_africana
ENSRROG00000042232	-	94	99.200	ENSMFAG00000045264	POLR1D	97	99.200	Macaca_fascicularis
ENSRROG00000042232	-	100	78.947	ENSMMUG00000041570	-	100	78.947	Macaca_mulatta
ENSRROG00000042232	-	87	100.000	ENSMMUG00000020386	POLR1D	100	100.000	Macaca_mulatta
ENSRROG00000042232	-	100	81.955	ENSMNEG00000038120	-	100	81.955	Macaca_nemestrina
ENSRROG00000042232	-	100	100.000	ENSMNEG00000008630	-	100	100.000	Macaca_nemestrina
ENSRROG00000042232	-	100	87.970	ENSMLEG00000032251	-	100	87.970	Mandrillus_leucophaeus
ENSRROG00000042232	-	100	100.000	ENSMLEG00000041048	-	100	100.000	Mandrillus_leucophaeus
ENSRROG00000042232	-	76	71.287	ENSMAMG00000014834	polr1d	94	71.287	Mastacembelus_armatus
ENSRROG00000042232	-	77	74.510	ENSMZEG00005006638	polr1d	90	74.510	Maylandia_zebra
ENSRROG00000042232	-	69	78.261	ENSMGAG00000005322	POLR1D	84	78.261	Meleagris_gallopavo
ENSRROG00000042232	-	100	95.489	ENSMAUG00000001946	Polr1d	100	95.489	Mesocricetus_auratus
ENSRROG00000042232	-	99	79.545	ENSMICG00000007349	-	100	79.545	Microcebus_murinus
ENSRROG00000042232	-	100	96.241	ENSMICG00000016883	-	100	96.241	Microcebus_murinus
ENSRROG00000042232	-	99	95.455	ENSMOCG00000021288	Polr1d	99	95.455	Microtus_ochrogaster
ENSRROG00000042232	-	80	68.224	ENSMMOG00000009605	polr1d	94	68.224	Mola_mola
ENSRROG00000042232	-	80	84.906	ENSMODG00000023881	POLR1D	93	84.906	Monodelphis_domestica
ENSRROG00000042232	-	80	67.290	ENSMALG00000010652	polr1d	94	67.290	Monopterus_albus
ENSRROG00000042232	-	100	89.474	MGP_CAROLIEiJ_G0028034	Polr1d	100	89.474	Mus_caroli
ENSRROG00000042232	-	100	89.474	ENSMUSG00000029642	Polr1d	100	89.474	Mus_musculus
ENSRROG00000042232	-	100	88.722	MGP_PahariEiJ_G0024600	Polr1d	100	88.722	Mus_pahari
ENSRROG00000042232	-	100	90.226	MGP_SPRETEiJ_G0029032	Polr1d	100	90.226	Mus_spretus
ENSRROG00000042232	-	99	87.121	ENSMLUG00000004118	-	99	87.121	Myotis_lucifugus
ENSRROG00000042232	-	100	95.489	ENSMLUG00000027169	-	100	95.489	Myotis_lucifugus
ENSRROG00000042232	-	87	95.690	ENSNGAG00000006014	Polr1d	100	95.690	Nannospalax_galili
ENSRROG00000042232	-	80	71.028	ENSNBRG00000020327	polr1d	94	71.028	Neolamprologus_brichardi
ENSRROG00000042232	-	100	99.248	ENSNLEG00000000358	POLR1D	100	99.248	Nomascus_leucogenys
ENSRROG00000042232	-	100	80.451	ENSODEG00000014801	-	100	80.451	Octodon_degus
ENSRROG00000042232	-	100	94.737	ENSODEG00000005294	-	100	94.737	Octodon_degus
ENSRROG00000042232	-	79	81.905	ENSOANG00000008708	-	97	81.905	Ornithorhynchus_anatinus
ENSRROG00000042232	-	100	95.489	ENSOCUG00000015706	POLR1D	82	95.489	Oryctolagus_cuniculus
ENSRROG00000042232	-	80	68.224	ENSORLG00000010257	polr1d	94	68.224	Oryzias_latipes
ENSRROG00000042232	-	83	66.667	ENSORLG00020000533	polr1d	75	66.667	Oryzias_latipes_hni
ENSRROG00000042232	-	85	67.257	ENSORLG00015013267	polr1d	75	67.257	Oryzias_latipes_hsok
ENSRROG00000042232	-	86	66.957	ENSOMEG00000014912	polr1d	77	66.957	Oryzias_melastigma
ENSRROG00000042232	-	100	96.241	ENSOGAG00000014601	POLR1D	100	96.241	Otolemur_garnettii
ENSRROG00000042232	-	94	94.400	ENSOARG00000017005	POLR1D	96	94.400	Ovis_aries
ENSRROG00000042232	-	100	97.744	ENSPPAG00000028138	POLR1D	100	97.744	Pan_paniscus
ENSRROG00000042232	-	99	97.727	ENSPPRG00000003381	POLR1D	99	97.727	Panthera_pardus
ENSRROG00000042232	-	93	97.581	ENSPTIG00000018137	POLR1D	93	97.581	Panthera_tigris_altaica
ENSRROG00000042232	-	100	99.248	ENSPTRG00000005734	POLR1D	100	99.248	Pan_troglodytes
ENSRROG00000042232	-	100	100.000	ENSPANG00000020259	-	100	100.000	Papio_anubis
ENSRROG00000042232	-	100	87.218	ENSPANG00000035051	-	100	87.218	Papio_anubis
ENSRROG00000042232	-	86	62.609	ENSPKIG00000021891	polr1d	90	53.097	Paramormyrops_kingsleyae
ENSRROG00000042232	-	87	72.650	ENSPSIG00000011822	POLR1D	91	72.650	Pelodiscus_sinensis
ENSRROG00000042232	-	93	56.800	ENSPMGG00000012998	POLR1D	93	56.800	Periophthalmus_magnuspinnatus
ENSRROG00000042232	-	84	66.071	ENSPMGG00000010359	polr1d	97	66.071	Periophthalmus_magnuspinnatus
ENSRROG00000042232	-	100	92.481	ENSPEMG00000006336	-	100	92.481	Peromyscus_maniculatus_bairdii
ENSRROG00000042232	-	82	59.633	ENSPMAG00000004228	polr1d	92	59.633	Petromyzon_marinus
ENSRROG00000042232	-	80	84.906	ENSPCIG00000001673	POLR1D	93	84.906	Phascolarctos_cinereus
ENSRROG00000042232	-	79	72.381	ENSPFOG00000023343	polr1d	92	73.750	Poecilia_formosa
ENSRROG00000042232	-	79	72.381	ENSPLAG00000009675	polr1d	92	72.381	Poecilia_latipinna
ENSRROG00000042232	-	79	72.381	ENSPMEG00000004628	polr1d	92	72.381	Poecilia_mexicana
ENSRROG00000042232	-	79	72.381	ENSPREG00000022032	polr1d	92	72.381	Poecilia_reticulata
ENSRROG00000042232	-	100	96.241	ENSPCOG00000028175	POLR1D	100	96.241	Propithecus_coquereli
ENSRROG00000042232	-	80	71.028	ENSPNYG00000000107	polr1d	94	71.028	Pundamilia_nyererei
ENSRROG00000042232	-	76	67.327	ENSPNAG00000001512	polr1d	87	66.346	Pygocentrus_nattereri
ENSRROG00000042232	-	100	100.000	ENSRBIG00000036378	-	100	100.000	Rhinopithecus_bieti
ENSRROG00000042232	-	100	94.737	ENSRBIG00000000336	-	100	94.737	Rhinopithecus_bieti
ENSRROG00000042232	-	89	45.378	YNL113W	RPC19	84	45.378	Saccharomyces_cerevisiae
ENSRROG00000042232	-	100	97.744	ENSSBOG00000028482	-	100	97.744	Saimiri_boliviensis_boliviensis
ENSRROG00000042232	-	86	91.228	ENSSBOG00000030146	-	84	91.228	Saimiri_boliviensis_boliviensis
ENSRROG00000042232	-	86	78.070	ENSSHAG00000001190	POLR1D	88	78.070	Sarcophilus_harrisii
ENSRROG00000042232	-	82	73.394	ENSSFOG00015011375	polr1d	96	73.394	Scleropages_formosus
ENSRROG00000042232	-	80	68.224	ENSSMAG00000011861	polr1d	94	68.224	Scophthalmus_maximus
ENSRROG00000042232	-	80	67.290	ENSSDUG00000011930	polr1d	94	67.290	Seriola_dumerili
ENSRROG00000042232	-	86	63.478	ENSSLDG00000023871	polr1d	97	63.478	Seriola_lalandi_dorsalis
ENSRROG00000042232	-	100	96.241	ENSSARG00000007840	POLR1D	100	96.241	Sorex_araneus
ENSRROG00000042232	-	79	76.190	ENSSPUG00000005786	POLR1D	95	72.973	Sphenodon_punctatus
ENSRROG00000042232	-	79	72.381	ENSSPAG00000011764	polr1d	92	72.381	Stegastes_partitus
ENSRROG00000042232	-	100	93.985	ENSSSCG00000009310	POLR1D	100	93.985	Sus_scrofa
ENSRROG00000042232	-	72	76.042	ENSTGUG00000005450	POLR1D	100	76.042	Taeniopygia_guttata
ENSRROG00000042232	-	78	65.385	ENSTRUG00000019741	polr1d	91	65.385	Takifugu_rubripes
ENSRROG00000042232	-	93	95.161	ENSTBEG00000007006	POLR1D	100	95.161	Tupaia_belangeri
ENSRROG00000042232	-	100	97.744	ENSUAMG00000011413	POLR1D	100	97.744	Ursus_americanus
ENSRROG00000042232	-	93	97.581	ENSUMAG00000016968	POLR1D	97	97.581	Ursus_maritimus
ENSRROG00000042232	-	100	97.744	ENSVVUG00000009216	POLR1D	100	97.744	Vulpes_vulpes
ENSRROG00000042232	-	74	75.510	ENSXCOG00000011731	polr1d	75	75.510	Xiphophorus_couchianus
ENSRROG00000042232	-	74	75.510	ENSXMAG00000017538	polr1d	75	75.510	Xiphophorus_maculatus