EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000042910 (Gene tree)
Gene ID: 104666701
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 382750 bases
Position: chrKN296386.1:195525-578274
Accession: 104666701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000039175	CMS1	PF14617.6	2.9e-32	1	1
ENSRROP00000039180	CMS1	PF14617.6	3.2e-32	1	1
ENSRROP00000039173	CMS1	PF14617.6	3.6e-32	1	1
ENSRROP00000039179	CMS1	PF14617.6	1.1e-28	1	1
ENSRROP00000039179	DEAD	PF00270.29	7.5e-06	1	1
ENSRROP00000039175	DEAD	PF00270.29	1e-05	1	1
ENSRROP00000039180	DEAD	PF00270.29	1.1e-05	1	1
ENSRROP00000039173	DEAD	PF00270.29	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000063657	CMSS1-204	810	-	ENSRROP00000039180	269 (aa)	-	A0A2K6RDW4
ENSRROT00000063656	CMSS1-203	1248	-	ENSRROP00000039179	241 (aa)	-	A0A2K6RDR4
ENSRROT00000063652	CMSS1-202	1308	XM_010368829	ENSRROP00000039175	261 (aa)	XP_010367131	A0A2K6RDV9
ENSRROT00000063650	CMSS1-201	840	XM_010368828	ENSRROP00000039173	279 (aa)	XP_010367130	A0A2K6RDP5

Gene Model

Click here to download ENSRROG00000042910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000042910's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000042910	CMSS1	100	95.402	ENSG00000184220	CMSS1	100	95.402	Homo_sapiens
ENSRROG00000042910	CMSS1	77	64.356	ENSAPOG00000010604	cmss1	82	64.356	Acanthochromis_polyacanthus
ENSRROG00000042910	CMSS1	99	88.417	ENSAMEG00000004092	CMSS1	100	88.417	Ailuropoda_melanoleuca
ENSRROG00000042910	CMSS1	76	58.696	ENSACIG00000021854	cmss1	86	51.770	Amphilophus_citrinellus
ENSRROG00000042910	CMSS1	100	50.853	ENSAOCG00000013361	cmss1	100	52.542	Amphiprion_ocellaris
ENSRROG00000042910	CMSS1	77	64.356	ENSAPEG00000005829	cmss1	100	51.667	Amphiprion_percula
ENSRROG00000042910	CMSS1	100	51.557	ENSATEG00000008209	cmss1	100	53.082	Anabas_testudineus
ENSRROG00000042910	CMSS1	88	68.261	ENSAPLG00000010542	CMSS1	100	68.261	Anas_platyrhynchos
ENSRROG00000042910	CMSS1	99	60.821	ENSACAG00000011065	CMSS1	99	60.370	Anolis_carolinensis
ENSRROG00000042910	CMSS1	100	92.500	ENSANAG00000023565	CMSS1	100	92.500	Aotus_nancymaae
ENSRROG00000042910	CMSS1	100	48.973	ENSACLG00000027294	cmss1	100	49.342	Astatotilapia_calliptera
ENSRROG00000042910	CMSS1	100	46.780	ENSAMXG00000002046	cmss1	100	47.635	Astyanax_mexicanus
ENSRROG00000042910	CMSS1	100	86.738	ENSBTAG00000013663	CMSS1	100	86.738	Bos_taurus
ENSRROG00000042910	CMSS1	100	92.143	ENSCJAG00000000610	CMSS1	100	92.143	Callithrix_jacchus
ENSRROG00000042910	CMSS1	100	89.272	ENSCAFG00000009230	CMSS1	95	89.272	Canis_familiaris
ENSRROG00000042910	CMSS1	98	89.883	ENSCAFG00020009464	-	95	89.575	Canis_lupus_dingo
ENSRROG00000042910	CMSS1	89	84.483	ENSCAFG00020024156	-	72	84.483	Canis_lupus_dingo
ENSRROG00000042910	CMSS1	98	87.938	ENSCHIG00000013003	CMSS1	93	87.938	Capra_hircus
ENSRROG00000042910	CMSS1	99	89.189	ENSTSYG00000009266	CMSS1	99	89.189	Carlito_syrichta
ENSRROG00000042910	CMSS1	85	73.362	ENSCAPG00000013584	CMSS1	100	73.799	Cavia_aperea
ENSRROG00000042910	CMSS1	100	87.455	ENSCPOG00000014680	CMSS1	100	87.455	Cavia_porcellus
ENSRROG00000042910	CMSS1	100	93.571	ENSCCAG00000034685	CMSS1	100	93.571	Cebus_capucinus
ENSRROG00000042910	CMSS1	100	98.467	ENSCATG00000031980	CMSS1	100	98.467	Cercocebus_atys
ENSRROG00000042910	CMSS1	88	93.450	ENSCLAG00000011241	CMSS1	98	93.450	Chinchilla_lanigera
ENSRROG00000042910	CMSS1	94	98.776	ENSCSAG00000006024	CMSS1	100	98.776	Chlorocebus_sabaeus
ENSRROG00000042910	CMSS1	100	67.384	ENSCHOG00000012098	CMSS1	100	67.384	Choloepus_hoffmanni
ENSRROG00000042910	CMSS1	72	41.837	ENSCING00000014848	-	100	42.246	Ciona_intestinalis
ENSRROG00000042910	CMSS1	52	42.857	ENSCSAVG00000002309	-	99	42.857	Ciona_savignyi
ENSRROG00000042910	CMSS1	100	98.566	ENSCANG00000031337	CMSS1	100	98.566	Colobus_angolensis_palliatus
ENSRROG00000042910	CMSS1	100	81.362	ENSCGRG00001014305	Cmss1	100	81.362	Cricetulus_griseus_chok1gshd
ENSRROG00000042910	CMSS1	98	82.422	ENSCGRG00000006722	Cmss1	99	82.422	Cricetulus_griseus_crigri
ENSRROG00000042910	CMSS1	100	50.505	ENSCSEG00000004958	cmss1	100	50.671	Cynoglossus_semilaevis
ENSRROG00000042910	CMSS1	100	51.211	ENSCVAG00000005039	cmss1	100	52.234	Cyprinodon_variegatus
ENSRROG00000042910	CMSS1	100	47.973	ENSDARG00000112579	cmss1	100	47.440	Danio_rerio
ENSRROG00000042910	CMSS1	100	83.969	ENSDNOG00000040418	CMSS1	93	83.969	Dasypus_novemcinctus
ENSRROG00000042910	CMSS1	100	86.380	ENSDORG00000010461	Cmss1	100	86.380	Dipodomys_ordii
ENSRROG00000042910	CMSS1	55	49.242	ENSEBUG00000002156	-	96	49.242	Eptatretus_burgeri
ENSRROG00000042910	CMSS1	99	82.692	ENSEASG00005010966	CMSS1	99	91.781	Equus_asinus_asinus
ENSRROG00000042910	CMSS1	98	90.272	ENSECAG00000015662	CMSS1	99	92.478	Equus_caballus
ENSRROG00000042910	CMSS1	100	56.631	ENSEEUG00000007624	-	100	56.631	Erinaceus_europaeus
ENSRROG00000042910	CMSS1	92	56.667	ENSELUG00000019459	cmss1	100	50.000	Esox_lucius
ENSRROG00000042910	CMSS1	100	91.398	ENSFCAG00000044577	CMSS1	100	91.398	Felis_catus
ENSRROG00000042910	CMSS1	91	64.557	ENSFALG00000005816	CMSS1	100	64.557	Ficedula_albicollis
ENSRROG00000042910	CMSS1	87	90.789	ENSFDAG00000012577	CMSS1	100	90.789	Fukomys_damarensis
ENSRROG00000042910	CMSS1	87	60.173	ENSFHEG00000012008	cmss1	95	60.173	Fundulus_heteroclitus
ENSRROG00000042910	CMSS1	99	49.492	ENSGMOG00000016729	cmss1	100	52.098	Gadus_morhua
ENSRROG00000042910	CMSS1	100	62.264	ENSGALG00000015267	CMSS1	100	62.595	Gallus_gallus
ENSRROG00000042910	CMSS1	79	63.285	ENSGAFG00000021217	cmss1	77	63.366	Gambusia_affinis
ENSRROG00000042910	CMSS1	99	47.518	ENSGACG00000002798	cmss1	100	49.291	Gasterosteus_aculeatus
ENSRROG00000042910	CMSS1	100	62.007	ENSGAGG00000019861	CMSS1	100	62.007	Gopherus_agassizii
ENSRROG00000042910	CMSS1	100	96.169	ENSGGOG00000014125	CMSS1	100	96.169	Gorilla_gorilla
ENSRROG00000042910	CMSS1	100	48.986	ENSHBUG00000008431	cmss1	100	49.655	Haplochromis_burtoni
ENSRROG00000042910	CMSS1	97	85.375	ENSHGLG00000019481	CMSS1	100	85.375	Heterocephalus_glaber_female
ENSRROG00000042910	CMSS1	98	85.603	ENSHGLG00100010314	CMSS1	100	85.603	Heterocephalus_glaber_male
ENSRROG00000042910	CMSS1	100	53.041	ENSHCOG00000003222	cmss1	100	52.667	Hippocampus_comes
ENSRROG00000042910	CMSS1	100	47.931	ENSIPUG00000011591	cmss1	100	47.945	Ictalurus_punctatus
ENSRROG00000042910	CMSS1	100	88.889	ENSSTOG00000019366	CMSS1	100	88.889	Ictidomys_tridecemlineatus
ENSRROG00000042910	CMSS1	100	82.437	ENSJJAG00000014894	Cmss1	100	82.437	Jaculus_jaculus
ENSRROG00000042910	CMSS1	76	56.614	ENSKMAG00000002390	cmss1	81	57.143	Kryptolebias_marmoratus
ENSRROG00000042910	CMSS1	85	52.917	ENSLBEG00000006298	cmss1	83	58.621	Labrus_bergylta
ENSRROG00000042910	CMSS1	87	64.348	ENSLACG00000009293	CMSS1	100	64.348	Latimeria_chalumnae
ENSRROG00000042910	CMSS1	100	50.704	ENSLOCG00000009391	cmss1	100	51.056	Lepisosteus_oculatus
ENSRROG00000042910	CMSS1	87	90.789	ENSLAFG00000017509	CMSS1	100	90.789	Loxodonta_africana
ENSRROG00000042910	CMSS1	100	98.208	ENSMFAG00000045006	CMSS1	100	98.208	Macaca_fascicularis
ENSRROG00000042910	CMSS1	100	97.849	ENSMMUG00000002939	CMSS1	100	97.849	Macaca_mulatta
ENSRROG00000042910	CMSS1	100	97.849	ENSMNEG00000031315	CMSS1	100	97.849	Macaca_nemestrina
ENSRROG00000042910	CMSS1	100	98.208	ENSMLEG00000033660	CMSS1	100	98.208	Mandrillus_leucophaeus
ENSRROG00000042910	CMSS1	100	51.974	ENSMAMG00000017176	cmss1	100	52.218	Mastacembelus_armatus
ENSRROG00000042910	CMSS1	100	48.973	ENSMZEG00005021886	cmss1	100	49.342	Maylandia_zebra
ENSRROG00000042910	CMSS1	87	67.544	ENSMGAG00000014360	CMSS1	100	67.544	Meleagris_gallopavo
ENSRROG00000042910	CMSS1	98	67.797	ENSMAUG00000020609	Cmss1	100	60.357	Mesocricetus_auratus
ENSRROG00000042910	CMSS1	100	90.681	ENSMICG00000048977	CMSS1	100	90.681	Microcebus_murinus
ENSRROG00000042910	CMSS1	100	79.928	ENSMOCG00000021937	Cmss1	100	79.928	Microtus_ochrogaster
ENSRROG00000042910	CMSS1	77	61.881	ENSMMOG00000019794	cmss1	89	59.091	Mola_mola
ENSRROG00000042910	CMSS1	97	73.228	ENSMODG00000002275	CMSS1	97	71.923	Monodelphis_domestica
ENSRROG00000042910	CMSS1	100	52.055	ENSMALG00000004250	cmss1	100	51.546	Monopterus_albus
ENSRROG00000042910	CMSS1	100	81.429	MGP_CAROLIEiJ_G0020824	Cmss1	100	81.429	Mus_caroli
ENSRROG00000042910	CMSS1	100	82.143	ENSMUSG00000022748	Cmss1	100	82.143	Mus_musculus
ENSRROG00000042910	CMSS1	100	80.714	MGP_PahariEiJ_G0016524	Cmss1	100	80.714	Mus_pahari
ENSRROG00000042910	CMSS1	100	81.429	MGP_SPRETEiJ_G0021724	Cmss1	100	81.429	Mus_spretus
ENSRROG00000042910	CMSS1	99	91.154	ENSMPUG00000011324	CMSS1	100	91.154	Mustela_putorius_furo
ENSRROG00000042910	CMSS1	99	89.655	ENSMLUG00000001131	CMSS1	99	90.000	Myotis_lucifugus
ENSRROG00000042910	CMSS1	100	83.513	ENSNGAG00000020316	Cmss1	100	83.513	Nannospalax_galili
ENSRROG00000042910	CMSS1	100	48.355	ENSNBRG00000003095	cmss1	100	49.828	Neolamprologus_brichardi
ENSRROG00000042910	CMSS1	100	96.935	ENSNLEG00000034172	CMSS1	100	96.935	Nomascus_leucogenys
ENSRROG00000042910	CMSS1	87	66.228	ENSMEUG00000014505	CMSS1	100	66.228	Notamacropus_eugenii
ENSRROG00000042910	CMSS1	100	89.606	ENSOPRG00000002986	CMSS1	100	89.606	Ochotona_princeps
ENSRROG00000042910	CMSS1	100	81.139	ENSODEG00000003558	-	100	81.139	Octodon_degus
ENSRROG00000042910	CMSS1	100	74.910	ENSODEG00000001853	-	100	74.910	Octodon_degus
ENSRROG00000042910	CMSS1	100	70.609	ENSODEG00000009446	-	100	70.609	Octodon_degus
ENSRROG00000042910	CMSS1	100	86.380	ENSODEG00000005226	-	100	86.380	Octodon_degus
ENSRROG00000042910	CMSS1	77	60.891	ENSONIG00000006678	cmss1	88	55.556	Oreochromis_niloticus
ENSRROG00000042910	CMSS1	98	72.692	ENSOANG00000007529	CMSS1	100	74.249	Ornithorhynchus_anatinus
ENSRROG00000042910	CMSS1	100	89.272	ENSOCUG00000025366	CMSS1	95	89.272	Oryctolagus_cuniculus
ENSRROG00000042910	CMSS1	100	53.082	ENSORLG00000020340	cmss1	100	53.082	Oryzias_latipes
ENSRROG00000042910	CMSS1	88	54.148	ENSORLG00020012235	cmss1	99	54.077	Oryzias_latipes_hni
ENSRROG00000042910	CMSS1	77	56.931	ENSORLG00015015551	cmss1	75	56.931	Oryzias_latipes_hsok
ENSRROG00000042910	CMSS1	100	53.793	ENSOMEG00000012555	cmss1	100	54.138	Oryzias_melastigma
ENSRROG00000042910	CMSS1	87	91.667	ENSOGAG00000002045	CMSS1	100	91.667	Otolemur_garnettii
ENSRROG00000042910	CMSS1	98	87.984	ENSOARG00000017899	CMSS1	91	86.090	Ovis_aries
ENSRROG00000042910	CMSS1	100	95.402	ENSPPAG00000038515	CMSS1	95	96.124	Pan_paniscus
ENSRROG00000042910	CMSS1	100	92.115	ENSPPRG00000016767	CMSS1	100	92.115	Panthera_pardus
ENSRROG00000042910	CMSS1	100	91.039	ENSPTIG00000018274	CMSS1	100	91.039	Panthera_tigris_altaica
ENSRROG00000042910	CMSS1	100	95.402	ENSPTRG00000015157	CMSS1	100	95.918	Pan_troglodytes
ENSRROG00000042910	CMSS1	100	93.103	ENSPANG00000019980	CMSS1	99	93.798	Papio_anubis
ENSRROG00000042910	CMSS1	94	54.779	ENSPKIG00000012609	cmss1	97	55.682	Paramormyrops_kingsleyae
ENSRROG00000042910	CMSS1	88	72.926	ENSPSIG00000003849	CMSS1	100	72.926	Pelodiscus_sinensis
ENSRROG00000042910	CMSS1	90	55.833	ENSPMGG00000010286	cmss1	100	57.203	Periophthalmus_magnuspinnatus
ENSRROG00000042910	CMSS1	100	82.143	ENSPEMG00000016384	Cmss1	100	82.143	Peromyscus_maniculatus_bairdii
ENSRROG00000042910	CMSS1	78	52.451	ENSPMAG00000001146	cmss1	99	52.970	Petromyzon_marinus
ENSRROG00000042910	CMSS1	95	74.494	ENSPCIG00000015656	CMSS1	94	74.494	Phascolarctos_cinereus
ENSRROG00000042910	CMSS1	100	51.748	ENSPFOG00000016849	cmss1	100	51.748	Poecilia_formosa
ENSRROG00000042910	CMSS1	100	51.399	ENSPLAG00000008323	cmss1	100	51.399	Poecilia_latipinna
ENSRROG00000042910	CMSS1	100	52.249	ENSPMEG00000021020	cmss1	100	53.103	Poecilia_mexicana
ENSRROG00000042910	CMSS1	77	62.376	ENSPREG00000007618	cmss1	69	62.376	Poecilia_reticulata
ENSRROG00000042910	CMSS1	100	94.265	ENSPPYG00000013606	CMSS1	100	94.265	Pongo_abelii
ENSRROG00000042910	CMSS1	100	89.964	ENSPCOG00000020035	CMSS1	100	89.964	Propithecus_coquereli
ENSRROG00000042910	CMSS1	100	77.419	ENSPVAG00000017031	CMSS1	100	77.419	Pteropus_vampyrus
ENSRROG00000042910	CMSS1	91	48.561	ENSPNYG00000013428	cmss1	97	49.281	Pundamilia_nyererei
ENSRROG00000042910	CMSS1	100	46.844	ENSPNAG00000007912	cmss1	100	47.508	Pygocentrus_nattereri
ENSRROG00000042910	CMSS1	99	80.769	ENSRNOG00000027888	Cmss1	100	80.769	Rattus_norvegicus
ENSRROG00000042910	CMSS1	100	100.000	ENSRBIG00000037931	CMSS1	100	100.000	Rhinopithecus_bieti
ENSRROG00000042910	CMSS1	100	92.748	ENSSBOG00000030980	CMSS1	100	92.748	Saimiri_boliviensis_boliviensis
ENSRROG00000042910	CMSS1	95	74.206	ENSSHAG00000009321	CMSS1	99	74.206	Sarcophilus_harrisii
ENSRROG00000042910	CMSS1	100	53.199	ENSSFOG00015001509	cmss1	100	54.296	Scleropages_formosus
ENSRROG00000042910	CMSS1	100	50.515	ENSSMAG00000001653	cmss1	100	51.505	Scophthalmus_maximus
ENSRROG00000042910	CMSS1	100	51.864	ENSSDUG00000007719	cmss1	100	53.767	Seriola_dumerili
ENSRROG00000042910	CMSS1	79	63.285	ENSSLDG00000012300	cmss1	75	58.889	Seriola_lalandi_dorsalis
ENSRROG00000042910	CMSS1	100	74.643	ENSSARG00000003584	CMSS1	100	74.643	Sorex_araneus
ENSRROG00000042910	CMSS1	87	69.027	ENSSPUG00000003865	CMSS1	100	69.027	Sphenodon_punctatus
ENSRROG00000042910	CMSS1	79	63.592	ENSSPAG00000019182	cmss1	82	54.682	Stegastes_partitus
ENSRROG00000042910	CMSS1	100	91.039	ENSSSCG00000011970	CMSS1	100	91.039	Sus_scrofa
ENSRROG00000042910	CMSS1	88	65.502	ENSTGUG00000013635	CMSS1	100	65.502	Taeniopygia_guttata
ENSRROG00000042910	CMSS1	100	50.877	ENSTRUG00000015265	cmss1	100	50.352	Takifugu_rubripes
ENSRROG00000042910	CMSS1	77	55.941	ENSTNIG00000002880	cmss1	73	55.941	Tetraodon_nigroviridis
ENSRROG00000042910	CMSS1	72	93.396	ENSTBEG00000016722	CMSS1	100	60.357	Tupaia_belangeri
ENSRROG00000042910	CMSS1	100	86.738	ENSTTRG00000001562	CMSS1	100	86.738	Tursiops_truncatus
ENSRROG00000042910	CMSS1	99	89.961	ENSUAMG00000024209	CMSS1	100	93.722	Ursus_americanus
ENSRROG00000042910	CMSS1	99	89.922	ENSUMAG00000001983	CMSS1	99	89.535	Ursus_maritimus
ENSRROG00000042910	CMSS1	100	68.100	ENSVPAG00000000263	CMSS1	100	68.100	Vicugna_pacos
ENSRROG00000042910	CMSS1	94	89.431	ENSVVUG00000021647	-	100	89.431	Vulpes_vulpes
ENSRROG00000042910	CMSS1	83	92.130	ENSVVUG00000007776	-	85	92.130	Vulpes_vulpes
ENSRROG00000042910	CMSS1	100	54.448	ENSXETG00000011858	cmss1	100	54.448	Xenopus_tropicalis
ENSRROG00000042910	CMSS1	80	62.500	ENSXCOG00000018724	cmss1	69	62.871	Xiphophorus_couchianus
ENSRROG00000042910	CMSS1	80	62.500	ENSXMAG00000011243	cmss1	76	62.871	Xiphophorus_maculatus