EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000042912 (Gene tree)
Gene ID: 104677015
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 108860 bases
Position: chrKN298418.1:689249-798108
Accession: 104677015
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000039195	Ago_hook	PF10427.9	2.2e-21	1	1
ENSRROP00000039192	Ago_hook	PF10427.9	2.7e-21	1	1
ENSRROP00000039181	Ago_hook	PF10427.9	3e-21	1	1
ENSRROP00000039186	Ago_hook	PF10427.9	8.3e-21	1	1
ENSRROP00000039195	RRM_1	PF00076.22	0.00035	1	1
ENSRROP00000039186	RRM_1	PF00076.22	0.00036	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000063669	TNRC6C-203	5808	-	ENSRROP00000039192	1935 (aa)	-	A0A2K6RDS5
ENSRROT00000063663	TNRC6C-202	8363	XM_010381911	ENSRROP00000039186	1725 (aa)	XP_010380213	A0A2K6RDU4
ENSRROT00000063672	TNRC6C-204	5070	-	ENSRROP00000039195	1689 (aa)	-	A0A2K6RDX8
ENSRROT00000063658	TNRC6C-201	5832	-	ENSRROP00000039181	1943 (aa)	-	A0A2K6RDT9

Gene Model

Click here to download ENSRROG00000042912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000042912's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000042912	TNRC6C	98	44.351	ENSRROG00000032360	TNRC6A	98	42.753
ENSRROG00000042912	TNRC6C	98	37.401	ENSRROG00000031135	TNRC6B	91	53.012

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000042912	TNRC6C	100	99.015	ENSG00000078687	TNRC6C	100	100.000	Homo_sapiens
ENSRROG00000042912	TNRC6C	80	54.689	ENSAPOG00000019749	tnrc6c1	98	49.262	Acanthochromis_polyacanthus
ENSRROG00000042912	TNRC6C	100	89.474	ENSAMEG00000013756	TNRC6C	99	89.065	Ailuropoda_melanoleuca
ENSRROG00000042912	TNRC6C	94	50.240	ENSACIG00000008075	tnrc6c1	98	54.303	Amphilophus_citrinellus
ENSRROG00000042912	TNRC6C	77	69.120	ENSAOCG00000023968	tnrc6c1	99	49.155	Amphiprion_ocellaris
ENSRROG00000042912	TNRC6C	80	54.526	ENSAPEG00000009020	tnrc6c1	99	49.053	Amphiprion_percula
ENSRROG00000042912	TNRC6C	100	87.049	ENSAPLG00000005456	TNRC6C	100	86.474	Anas_platyrhynchos
ENSRROG00000042912	TNRC6C	100	87.789	ENSACAG00000016198	TNRC6C	98	86.875	Anolis_carolinensis
ENSRROG00000042912	TNRC6C	100	98.096	ENSANAG00000021554	TNRC6C	100	98.096	Aotus_nancymaae
ENSRROG00000042912	TNRC6C	100	48.806	ENSACLG00000000424	tnrc6c1	99	48.660	Astatotilapia_calliptera
ENSRROG00000042912	TNRC6C	97	91.076	ENSBTAG00000018658	TNRC6C	100	88.187	Bos_taurus
ENSRROG00000042912	TNRC6C	100	97.993	ENSCJAG00000019431	TNRC6C	100	97.993	Callithrix_jacchus
ENSRROG00000042912	TNRC6C	100	91.488	ENSCAFG00000005224	TNRC6C	99	90.999	Canis_familiaris
ENSRROG00000042912	TNRC6C	100	91.124	ENSCAFG00020006661	TNRC6C	100	90.420	Canis_lupus_dingo
ENSRROG00000042912	TNRC6C	100	87.574	ENSCHIG00000026004	TNRC6C	100	86.118	Capra_hircus
ENSRROG00000042912	TNRC6C	100	95.942	ENSTSYG00000005403	TNRC6C	100	95.942	Carlito_syrichta
ENSRROG00000042912	TNRC6C	100	84.765	ENSCAPG00000007307	TNRC6C	99	83.866	Cavia_aperea
ENSRROG00000042912	TNRC6C	100	90.053	ENSCPOG00000000467	TNRC6C	100	88.110	Cavia_porcellus
ENSRROG00000042912	TNRC6C	100	98.377	ENSCCAG00000030524	TNRC6C	100	98.377	Cebus_capucinus
ENSRROG00000042912	TNRC6C	100	99.434	ENSCATG00000033135	TNRC6C	100	99.434	Cercocebus_atys
ENSRROG00000042912	TNRC6C	100	92.954	ENSCLAG00000011139	TNRC6C	99	90.260	Chinchilla_lanigera
ENSRROG00000042912	TNRC6C	100	99.362	ENSCSAG00000005167	TNRC6C	100	98.971	Chlorocebus_sabaeus
ENSRROG00000042912	TNRC6C	75	92.210	ENSCHOG00000000088	TNRC6C	72	91.332	Choloepus_hoffmanni
ENSRROG00000042912	TNRC6C	100	88.187	ENSCPBG00000027960	TNRC6C	100	88.187	Chrysemys_picta_bellii
ENSRROG00000042912	TNRC6C	100	99.331	ENSCANG00000041771	TNRC6C	100	99.331	Colobus_angolensis_palliatus
ENSRROG00000042912	TNRC6C	100	89.806	ENSCGRG00001022686	Tnrc6c	100	88.627	Cricetulus_griseus_chok1gshd
ENSRROG00000042912	TNRC6C	100	90.231	ENSCGRG00000018041	Tnrc6c	100	88.627	Cricetulus_griseus_crigri
ENSRROG00000042912	TNRC6C	80	52.990	ENSCSEG00000012744	tnrc6c1	98	45.815	Cynoglossus_semilaevis
ENSRROG00000042912	TNRC6C	100	54.308	ENSDARG00000076847	tnrc6c1	99	54.370	Danio_rerio
ENSRROG00000042912	TNRC6C	100	91.209	ENSDNOG00000003247	TNRC6C	99	89.033	Dasypus_novemcinctus
ENSRROG00000042912	TNRC6C	100	85.815	ENSDORG00000004558	Tnrc6c	100	85.639	Dipodomys_ordii
ENSRROG00000042912	TNRC6C	90	83.130	ENSETEG00000005527	TNRC6C	86	83.715	Echinops_telfairi
ENSRROG00000042912	TNRC6C	100	91.124	ENSEASG00005004799	TNRC6C	100	91.183	Equus_asinus_asinus
ENSRROG00000042912	TNRC6C	100	91.251	ENSECAG00000012486	TNRC6C	99	90.501	Equus_caballus
ENSRROG00000042912	TNRC6C	96	91.497	ENSEEUG00000010008	TNRC6C	96	92.047	Erinaceus_europaeus
ENSRROG00000042912	TNRC6C	100	89.132	ENSFCAG00000028358	TNRC6C	100	89.073	Felis_catus
ENSRROG00000042912	TNRC6C	100	87.181	ENSFALG00000000848	TNRC6C	100	86.444	Ficedula_albicollis
ENSRROG00000042912	TNRC6C	100	91.297	ENSFDAG00000010368	TNRC6C	100	89.624	Fukomys_damarensis
ENSRROG00000042912	TNRC6C	89	70.675	ENSFHEG00000002936	tnrc6c1	99	45.736	Fundulus_heteroclitus
ENSRROG00000042912	TNRC6C	100	89.050	ENSGALG00000001725	TNRC6C	100	88.580	Gallus_gallus
ENSRROG00000042912	TNRC6C	100	48.868	ENSGAFG00000019019	tnrc6c1	100	49.172	Gambusia_affinis
ENSRROG00000042912	TNRC6C	95	52.701	ENSGACG00000012320	tnrc6c1	97	48.016	Gasterosteus_aculeatus
ENSRROG00000042912	TNRC6C	100	87.803	ENSGAGG00000022043	TNRC6C	99	87.596	Gopherus_agassizii
ENSRROG00000042912	TNRC6C	100	98.302	ENSGGOG00000011304	TNRC6C	100	98.302	Gorilla_gorilla
ENSRROG00000042912	TNRC6C	100	47.802	ENSHBUG00000010846	tnrc6c1	99	48.784	Haplochromis_burtoni
ENSRROG00000042912	TNRC6C	100	92.481	ENSHGLG00000004809	TNRC6C	99	89.693	Heterocephalus_glaber_female
ENSRROG00000042912	TNRC6C	100	91.456	ENSHGLG00100012597	TNRC6C	99	89.849	Heterocephalus_glaber_male
ENSRROG00000042912	TNRC6C	99	50.910	ENSIPUG00000000818	tnrc6c1	98	51.605	Ictalurus_punctatus
ENSRROG00000042912	TNRC6C	100	91.248	ENSSTOG00000009101	TNRC6C	100	88.964	Ictidomys_tridecemlineatus
ENSRROG00000042912	TNRC6C	100	88.627	ENSJJAG00000017055	Tnrc6c	99	86.837	Jaculus_jaculus
ENSRROG00000042912	TNRC6C	99	48.062	ENSKMAG00000021023	tnrc6c1	100	50.720	Kryptolebias_marmoratus
ENSRROG00000042912	TNRC6C	100	75.543	ENSLACG00000015283	TNRC6C	100	74.082	Latimeria_chalumnae
ENSRROG00000042912	TNRC6C	99	56.641	ENSLOCG00000013377	tnrc6c1	99	55.604	Lepisosteus_oculatus
ENSRROG00000042912	TNRC6C	100	90.572	ENSLAFG00000011122	TNRC6C	99	88.802	Loxodonta_africana
ENSRROG00000042912	TNRC6C	100	99.536	ENSMFAG00000043943	TNRC6C	100	99.536	Macaca_fascicularis
ENSRROG00000042912	TNRC6C	100	99.536	ENSMMUG00000011924	TNRC6C	100	99.526	Macaca_mulatta
ENSRROG00000042912	TNRC6C	100	99.537	ENSMNEG00000030405	TNRC6C	100	99.537	Macaca_nemestrina
ENSRROG00000042912	TNRC6C	100	99.537	ENSMLEG00000033436	TNRC6C	100	99.537	Mandrillus_leucophaeus
ENSRROG00000042912	TNRC6C	94	55.108	ENSMAMG00000023613	tnrc6c1	100	51.314	Mastacembelus_armatus
ENSRROG00000042912	TNRC6C	100	48.806	ENSMZEG00005010920	tnrc6c1	99	48.660	Maylandia_zebra
ENSRROG00000042912	TNRC6C	100	80.183	ENSMGAG00000003906	TNRC6C	100	80.610	Meleagris_gallopavo
ENSRROG00000042912	TNRC6C	100	89.511	ENSMAUG00000021618	Tnrc6c	100	89.452	Mesocricetus_auratus
ENSRROG00000042912	TNRC6C	100	94.493	ENSMICG00000003952	TNRC6C	100	94.377	Microcebus_murinus
ENSRROG00000042912	TNRC6C	100	91.770	ENSMOCG00000015879	Tnrc6c	100	89.288	Microtus_ochrogaster
ENSRROG00000042912	TNRC6C	79	55.971	ENSMMOG00000005203	tnrc6c1	100	50.536	Mola_mola
ENSRROG00000042912	TNRC6C	100	87.235	ENSMODG00000001785	TNRC6C	99	85.283	Monodelphis_domestica
ENSRROG00000042912	TNRC6C	100	91.237	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	88.783	Mus_caroli
ENSRROG00000042912	TNRC6C	100	91.001	ENSMUSG00000025571	Tnrc6c	100	88.559	Mus_musculus
ENSRROG00000042912	TNRC6C	100	91.060	MGP_PahariEiJ_G0018593	Tnrc6c	100	88.615	Mus_pahari
ENSRROG00000042912	TNRC6C	100	91.060	MGP_SPRETEiJ_G0018309	Tnrc6c	100	88.615	Mus_spretus
ENSRROG00000042912	TNRC6C	100	88.940	ENSMPUG00000013348	TNRC6C	98	88.554	Mustela_putorius_furo
ENSRROG00000042912	TNRC6C	100	82.360	ENSMLUG00000014431	TNRC6C	98	81.944	Myotis_lucifugus
ENSRROG00000042912	TNRC6C	100	90.748	ENSNGAG00000012203	Tnrc6c	99	89.167	Nannospalax_galili
ENSRROG00000042912	TNRC6C	93	49.018	ENSNBRG00000005344	tnrc6c1	99	49.232	Neolamprologus_brichardi
ENSRROG00000042912	TNRC6C	100	95.730	ENSNLEG00000000047	TNRC6C	99	95.996	Nomascus_leucogenys
ENSRROG00000042912	TNRC6C	97	81.879	ENSMEUG00000005104	TNRC6C	99	90.104	Notamacropus_eugenii
ENSRROG00000042912	TNRC6C	100	91.889	ENSODEG00000012499	TNRC6C	100	92.066	Octodon_degus
ENSRROG00000042912	TNRC6C	94	51.399	ENSONIG00000002210	tnrc6c1	96	52.257	Oreochromis_niloticus
ENSRROG00000042912	TNRC6C	99	63.647	ENSOANG00000009758	-	100	61.194	Ornithorhynchus_anatinus
ENSRROG00000042912	TNRC6C	81	88.246	ENSOCUG00000006122	TNRC6C	95	79.300	Oryctolagus_cuniculus
ENSRROG00000042912	TNRC6C	91	50.245	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSRROG00000042912	TNRC6C	92	50.120	ENSORLG00020016510	tnrc6c1	100	49.279	Oryzias_latipes_hni
ENSRROG00000042912	TNRC6C	72	45.227	ENSORLG00015000171	tnrc6c1	98	44.851	Oryzias_latipes_hsok
ENSRROG00000042912	TNRC6C	92	51.050	ENSOMEG00000000357	tnrc6c1	99	48.292	Oryzias_melastigma
ENSRROG00000042912	TNRC6C	100	93.101	ENSOGAG00000007197	TNRC6C	100	93.101	Otolemur_garnettii
ENSRROG00000042912	TNRC6C	96	84.806	ENSOARG00000006041	TNRC6C	97	84.997	Ovis_aries
ENSRROG00000042912	TNRC6C	100	98.957	ENSPPAG00000027160	TNRC6C	100	98.957	Pan_paniscus
ENSRROG00000042912	TNRC6C	100	89.132	ENSPPRG00000018881	TNRC6C	100	89.073	Panthera_pardus
ENSRROG00000042912	TNRC6C	90	86.026	ENSPTIG00000008791	TNRC6C	81	96.726	Panthera_tigris_altaica
ENSRROG00000042912	TNRC6C	100	98.957	ENSPTRG00000009699	TNRC6C	100	98.957	Pan_troglodytes
ENSRROG00000042912	TNRC6C	100	99.537	ENSPANG00000019994	TNRC6C	100	99.537	Papio_anubis
ENSRROG00000042912	TNRC6C	96	52.837	ENSPKIG00000005428	tnrc6c1	100	51.743	Paramormyrops_kingsleyae
ENSRROG00000042912	TNRC6C	100	86.576	ENSPSIG00000018069	TNRC6C	100	84.172	Pelodiscus_sinensis
ENSRROG00000042912	TNRC6C	79	54.409	ENSPMGG00000022911	tnrc6c1	97	62.857	Periophthalmus_magnuspinnatus
ENSRROG00000042912	TNRC6C	100	90.866	ENSPEMG00000009785	Tnrc6c	100	88.450	Peromyscus_maniculatus_bairdii
ENSRROG00000042912	TNRC6C	58	86.051	ENSPCIG00000017421	-	99	85.905	Phascolarctos_cinereus
ENSRROG00000042912	TNRC6C	100	48.947	ENSPFOG00000012560	tnrc6c1	97	57.427	Poecilia_formosa
ENSRROG00000042912	TNRC6C	100	50.000	ENSPLAG00000021055	tnrc6c1	100	49.916	Poecilia_latipinna
ENSRROG00000042912	TNRC6C	100	99.188	ENSPPYG00000008679	TNRC6C	99	98.713	Pongo_abelii
ENSRROG00000042912	TNRC6C	93	92.891	ENSPCAG00000012510	TNRC6C	91	92.891	Procavia_capensis
ENSRROG00000042912	TNRC6C	100	94.957	ENSPCOG00000021451	TNRC6C	100	94.957	Propithecus_coquereli
ENSRROG00000042912	TNRC6C	96	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSRROG00000042912	TNRC6C	100	47.640	ENSPNYG00000014477	tnrc6c1	99	48.421	Pundamilia_nyererei
ENSRROG00000042912	TNRC6C	100	90.302	ENSRNOG00000022395	Tnrc6c	100	90.361	Rattus_norvegicus
ENSRROG00000042912	TNRC6C	100	99.948	ENSRBIG00000027777	TNRC6C	100	99.948	Rhinopithecus_bieti
ENSRROG00000042912	TNRC6C	100	97.913	ENSSBOG00000023981	TNRC6C	100	97.913	Saimiri_boliviensis_boliviensis
ENSRROG00000042912	TNRC6C	54	90.486	ENSSHAG00000018330	-	100	89.838	Sarcophilus_harrisii
ENSRROG00000042912	TNRC6C	93	57.730	ENSSFOG00015006475	tnrc6c1	99	51.852	Scleropages_formosus
ENSRROG00000042912	TNRC6C	76	56.499	ENSSFOG00015004735	-	99	61.257	Scleropages_formosus
ENSRROG00000042912	TNRC6C	100	49.002	ENSSMAG00000012761	tnrc6c1	99	50.603	Scophthalmus_maximus
ENSRROG00000042912	TNRC6C	100	50.885	ENSSDUG00000002366	tnrc6c1	99	49.605	Seriola_dumerili
ENSRROG00000042912	TNRC6C	100	49.112	ENSSLDG00000025613	tnrc6c1	100	50.222	Seriola_lalandi_dorsalis
ENSRROG00000042912	TNRC6C	91	90.086	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSRROG00000042912	TNRC6C	83	86.944	ENSSPUG00000007341	TNRC6C	98	87.014	Sphenodon_punctatus
ENSRROG00000042912	TNRC6C	79	54.089	ENSSPAG00000014977	tnrc6c1	97	49.041	Stegastes_partitus
ENSRROG00000042912	TNRC6C	97	90.951	ENSSSCG00000034373	TNRC6C	100	88.149	Sus_scrofa
ENSRROG00000042912	TNRC6C	100	88.646	ENSTGUG00000007733	TNRC6C	100	86.186	Taeniopygia_guttata
ENSRROG00000042912	TNRC6C	87	55.056	ENSTRUG00000011685	tnrc6c1	100	50.000	Takifugu_rubripes
ENSRROG00000042912	TNRC6C	88	52.937	ENSTNIG00000005273	tnrc6c1	100	61.078	Tetraodon_nigroviridis
ENSRROG00000042912	TNRC6C	67	82.234	ENSTBEG00000005046	TNRC6C	100	82.586	Tupaia_belangeri
ENSRROG00000042912	TNRC6C	100	90.952	ENSTTRG00000010828	TNRC6C	97	91.011	Tursiops_truncatus
ENSRROG00000042912	TNRC6C	100	89.292	ENSUMAG00000013614	TNRC6C	99	89.652	Ursus_maritimus
ENSRROG00000042912	TNRC6C	52	81.207	ENSVPAG00000006765	-	99	81.214	Vicugna_pacos
ENSRROG00000042912	TNRC6C	100	91.780	ENSVVUG00000015268	TNRC6C	100	91.780	Vulpes_vulpes
ENSRROG00000042912	TNRC6C	100	75.206	ENSXETG00000019470	tnrc6c	100	74.559	Xenopus_tropicalis
ENSRROG00000042912	TNRC6C	100	49.885	ENSXMAG00000025971	tnrc6c1	100	49.089	Xiphophorus_maculatus