EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000043328 (Gene tree)
Gene ID: 104667157
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 6953 bases
Position: chrKN296485.1:522470-529422
Accession: 104667157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000040081	PseudoU_synth_2	PF00849.22	1.8e-20	1	1
ENSRROP00000040087	PseudoU_synth_2	PF00849.22	4.1e-19	1	1
ENSRROP00000040077	PseudoU_synth_2	PF00849.22	3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000064576	RPUSD3-203	639	-	ENSRROP00000040087	212 (aa)	-	A0A2K6RGB8
ENSRROT00000064566	RPUSD3-201	1396	-	ENSRROP00000040077	389 (aa)	-	A0A2K6RGB1
ENSRROT00000064570	RPUSD3-202	1282	XM_010369406	ENSRROP00000040081	351 (aa)	XP_010367708	A0A2K6RGD6

Gene Model

Click here to download ENSRROG00000043328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000043328's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000043328	RPUSD3	79	30.104	ENSRROG00000039753	RPUSD4	72	30.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000043328	RPUSD3	100	94.340	ENSG00000156990	RPUSD3	100	94.340	Homo_sapiens
ENSRROG00000043328	RPUSD3	99	80.802	ENSAMEG00000016227	RPUSD3	99	80.802	Ailuropoda_melanoleuca
ENSRROG00000043328	RPUSD3	83	57.386	ENSACAG00000009836	RPUSD3	81	56.690	Anolis_carolinensis
ENSRROG00000043328	RPUSD3	91	89.637	ENSANAG00000019945	-	79	89.848	Aotus_nancymaae
ENSRROG00000043328	RPUSD3	99	65.714	ENSANAG00000007127	-	100	65.714	Aotus_nancymaae
ENSRROG00000043328	RPUSD3	99	82.297	ENSANAG00000038118	-	98	82.297	Aotus_nancymaae
ENSRROG00000043328	RPUSD3	95	84.653	ENSBTAG00000007968	RPUSD3	99	81.871	Bos_taurus
ENSRROG00000043328	RPUSD3	99	80.571	ENSCAFG00000029733	RPUSD3	99	80.571	Canis_familiaris
ENSRROG00000043328	RPUSD3	99	80.571	ENSCAFG00020008582	RPUSD3	99	80.571	Canis_lupus_dingo
ENSRROG00000043328	RPUSD3	95	84.158	ENSCHIG00000026027	RPUSD3	98	82.544	Capra_hircus
ENSRROG00000043328	RPUSD3	95	81.306	ENSTSYG00000009994	RPUSD3	96	81.306	Carlito_syrichta
ENSRROG00000043328	RPUSD3	74	83.077	ENSCAPG00000017559	RPUSD3	98	83.077	Cavia_aperea
ENSRROG00000043328	RPUSD3	98	69.275	ENSCPOG00000037956	RPUSD3	91	69.275	Cavia_porcellus
ENSRROG00000043328	RPUSD3	100	91.038	ENSCCAG00000029530	RPUSD3	100	91.038	Cebus_capucinus
ENSRROG00000043328	RPUSD3	100	98.585	ENSCATG00000036939	RPUSD3	100	98.585	Cercocebus_atys
ENSRROG00000043328	RPUSD3	100	97.151	ENSCSAG00000010506	RPUSD3	100	97.151	Chlorocebus_sabaeus
ENSRROG00000043328	RPUSD3	54	86.667	ENSCHOG00000010151	-	65	86.667	Choloepus_hoffmanni
ENSRROG00000043328	RPUSD3	73	54.475	ENSCPBG00000008825	RPUSD3	95	55.039	Chrysemys_picta_bellii
ENSRROG00000043328	RPUSD3	100	99.057	ENSCANG00000040711	RPUSD3	100	99.057	Colobus_angolensis_palliatus
ENSRROG00000043328	RPUSD3	99	73.199	ENSCGRG00001004923	Rpusd3	96	73.199	Cricetulus_griseus_chok1gshd
ENSRROG00000043328	RPUSD3	95	74.777	ENSCGRG00000018315	Rpusd3	98	74.777	Cricetulus_griseus_crigri
ENSRROG00000043328	RPUSD3	99	76.571	ENSDNOG00000039160	RPUSD3	93	76.571	Dasypus_novemcinctus
ENSRROG00000043328	RPUSD3	74	77.612	ENSDORG00000026827	Rpusd3	92	77.612	Dipodomys_ordii
ENSRROG00000043328	RPUSD3	99	72.286	ENSETEG00000006538	RPUSD3	99	72.493	Echinops_telfairi
ENSRROG00000043328	RPUSD3	81	36.782	ENSEBUG00000015605	RPUSD3	67	38.835	Eptatretus_burgeri
ENSRROG00000043328	RPUSD3	99	81.948	ENSEASG00005014160	RPUSD3	97	81.948	Equus_asinus_asinus
ENSRROG00000043328	RPUSD3	99	83.381	ENSECAG00000019988	RPUSD3	97	83.381	Equus_caballus
ENSRROG00000043328	RPUSD3	95	58.065	ENSEEUG00000007353	RPUSD3	82	75.472	Erinaceus_europaeus
ENSRROG00000043328	RPUSD3	99	80.857	ENSFCAG00000014199	RPUSD3	99	80.857	Felis_catus
ENSRROG00000043328	RPUSD3	78	49.275	ENSFALG00000012968	RPUSD3	99	46.739	Ficedula_albicollis
ENSRROG00000043328	RPUSD3	75	84.351	ENSFDAG00000008350	RPUSD3	80	84.674	Fukomys_damarensis
ENSRROG00000043328	RPUSD3	75	55.133	ENSGAGG00000007493	RPUSD3	82	56.061	Gopherus_agassizii
ENSRROG00000043328	RPUSD3	100	95.283	ENSGGOG00000013120	RPUSD3	100	95.283	Gorilla_gorilla
ENSRROG00000043328	RPUSD3	87	79.891	ENSHGLG00000011722	RPUSD3	96	69.251	Heterocephalus_glaber_female
ENSRROG00000043328	RPUSD3	87	79.891	ENSHGLG00100016038	RPUSD3	96	69.251	Heterocephalus_glaber_male
ENSRROG00000043328	RPUSD3	95	83.168	ENSSTOG00000002125	RPUSD3	99	78.223	Ictidomys_tridecemlineatus
ENSRROG00000043328	RPUSD3	95	74.757	ENSJJAG00000012679	Rpusd3	98	74.481	Jaculus_jaculus
ENSRROG00000043328	RPUSD3	94	84.000	ENSLAFG00000017501	RPUSD3	98	81.845	Loxodonta_africana
ENSRROG00000043328	RPUSD3	100	96.581	ENSMFAG00000032407	RPUSD3	100	96.581	Macaca_fascicularis
ENSRROG00000043328	RPUSD3	99	95.735	ENSMMUG00000010628	RPUSD3	97	97.749	Macaca_mulatta
ENSRROG00000043328	RPUSD3	100	96.296	ENSMNEG00000040308	RPUSD3	100	96.296	Macaca_nemestrina
ENSRROG00000043328	RPUSD3	100	99.057	ENSMLEG00000033940	RPUSD3	100	99.057	Mandrillus_leucophaeus
ENSRROG00000043328	RPUSD3	94	76.418	ENSMAUG00000015473	Rpusd3	97	76.418	Mesocricetus_auratus
ENSRROG00000043328	RPUSD3	99	83.886	ENSMICG00000002315	RPUSD3	98	83.886	Microcebus_murinus
ENSRROG00000043328	RPUSD3	95	73.887	ENSMOCG00000022613	Rpusd3	98	73.887	Microtus_ochrogaster
ENSRROG00000043328	RPUSD3	99	54.830	ENSMODG00000005210	RPUSD3	90	54.830	Monodelphis_domestica
ENSRROG00000043328	RPUSD3	97	73.314	MGP_CAROLIEiJ_G0028725	Rpusd3	99	73.314	Mus_caroli
ENSRROG00000043328	RPUSD3	97	73.607	ENSMUSG00000051169	Rpusd3	99	73.607	Mus_musculus
ENSRROG00000043328	RPUSD3	97	73.900	MGP_PahariEiJ_G0022476	Rpusd3	99	73.900	Mus_pahari
ENSRROG00000043328	RPUSD3	97	73.314	MGP_SPRETEiJ_G0029753	Rpusd3	99	73.314	Mus_spretus
ENSRROG00000043328	RPUSD3	99	78.223	ENSMPUG00000017132	RPUSD3	99	78.223	Mustela_putorius_furo
ENSRROG00000043328	RPUSD3	97	84.257	ENSMLUG00000006135	RPUSD3	99	84.257	Myotis_lucifugus
ENSRROG00000043328	RPUSD3	97	75.073	ENSNGAG00000023704	Rpusd3	99	75.073	Nannospalax_galili
ENSRROG00000043328	RPUSD3	100	95.283	ENSNLEG00000004214	RPUSD3	100	95.283	Nomascus_leucogenys
ENSRROG00000043328	RPUSD3	74	67.433	ENSMEUG00000013098	-	100	67.433	Notamacropus_eugenii
ENSRROG00000043328	RPUSD3	97	62.941	ENSOPRG00000002300	RPUSD3	96	62.941	Ochotona_princeps
ENSRROG00000043328	RPUSD3	74	81.609	ENSODEG00000018137	RPUSD3	90	81.609	Octodon_degus
ENSRROG00000043328	RPUSD3	84	53.371	ENSOANG00000012081	-	99	51.930	Ornithorhynchus_anatinus
ENSRROG00000043328	RPUSD3	89	79.474	ENSOCUG00000027885	RPUSD3	99	67.529	Oryctolagus_cuniculus
ENSRROG00000043328	RPUSD3	95	84.236	ENSOGAG00000012592	RPUSD3	99	85.161	Otolemur_garnettii
ENSRROG00000043328	RPUSD3	95	86.634	ENSOARG00000005928	RPUSD3	99	82.521	Ovis_aries
ENSRROG00000043328	RPUSD3	100	94.340	ENSPPAG00000038083	RPUSD3	100	94.340	Pan_paniscus
ENSRROG00000043328	RPUSD3	99	80.857	ENSPPRG00000024433	RPUSD3	99	80.857	Panthera_pardus
ENSRROG00000043328	RPUSD3	96	82.789	ENSPTIG00000006828	RPUSD3	98	82.789	Panthera_tigris_altaica
ENSRROG00000043328	RPUSD3	100	95.283	ENSPTRG00000051760	RPUSD3	100	95.283	Pan_troglodytes
ENSRROG00000043328	RPUSD3	100	99.057	ENSPANG00000023885	RPUSD3	100	99.057	Papio_anubis
ENSRROG00000043328	RPUSD3	95	74.777	ENSPEMG00000017245	Rpusd3	98	74.777	Peromyscus_maniculatus_bairdii
ENSRROG00000043328	RPUSD3	85	64.835	ENSPCIG00000021901	RPUSD3	84	64.483	Phascolarctos_cinereus
ENSRROG00000043328	RPUSD3	100	92.593	ENSPPYG00000013676	RPUSD3	100	92.593	Pongo_abelii
ENSRROG00000043328	RPUSD3	95	59.406	ENSPCAG00000013731	-	83	82.237	Procavia_capensis
ENSRROG00000043328	RPUSD3	99	86.571	ENSPCOG00000018314	RPUSD3	99	86.571	Propithecus_coquereli
ENSRROG00000043328	RPUSD3	95	84.653	ENSPVAG00000011107	RPUSD3	99	80.229	Pteropus_vampyrus
ENSRROG00000043328	RPUSD3	97	68.915	ENSRNOG00000009084	Rpusd3	99	68.915	Rattus_norvegicus
ENSRROG00000043328	RPUSD3	100	100.000	ENSRBIG00000041230	RPUSD3	100	100.000	Rhinopithecus_bieti
ENSRROG00000043328	RPUSD3	100	88.889	ENSSBOG00000036106	RPUSD3	100	88.889	Saimiri_boliviensis_boliviensis
ENSRROG00000043328	RPUSD3	95	58.416	ENSSHAG00000015536	RPUSD3	99	59.677	Sarcophilus_harrisii
ENSRROG00000043328	RPUSD3	100	79.830	ENSSSCG00000011555	RPUSD3	99	80.286	Sus_scrofa
ENSRROG00000043328	RPUSD3	73	46.452	ENSTGUG00000008744	RPUSD3	93	49.770	Taeniopygia_guttata
ENSRROG00000043328	RPUSD3	95	82.673	ENSTBEG00000000176	RPUSD3	100	79.239	Tupaia_belangeri
ENSRROG00000043328	RPUSD3	100	80.682	ENSTTRG00000007544	RPUSD3	99	81.143	Tursiops_truncatus
ENSRROG00000043328	RPUSD3	96	81.463	ENSUAMG00000011354	RPUSD3	97	82.903	Ursus_americanus
ENSRROG00000043328	RPUSD3	99	80.571	ENSUMAG00000018830	RPUSD3	99	80.571	Ursus_maritimus
ENSRROG00000043328	RPUSD3	99	81.604	ENSVVUG00000023735	RPUSD3	98	82.196	Vulpes_vulpes
ENSRROG00000043328	RPUSD3	81	49.711	ENSXETG00000023546	rpusd3	99	49.645	Xenopus_tropicalis