EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000043620 (Gene tree)
Gene ID: 104673703
Gene Symbol: PYM1
Alias: PYM|WIBG
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 29581 bases
Position: chrKN297819.1:1047454-1077034
Accession: 104673703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000040800	Mago-bind	PF09282.10	5.6e-14	1	1
ENSRROP00000040795	Mago-bind	PF09282.10	1.2e-13	1	1
ENSRROP00000040788	Mago-bind	PF09282.10	2.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000065288	PYM1-204	1115	XM_010377835	ENSRROP00000040795	203 (aa)	XP_010376137	A0A2K6RIG2
ENSRROT00000065281	PYM1-201	1964	XM_010377834	ENSRROP00000040788	204 (aa)	XP_010376136	A0A2K6RID3
ENSRROT00000065286	PYM1-203	234	-	ENSRROP00000040793	77 (aa)	-	A0A2K6RIE1
ENSRROT00000065293	PYM1-205	609	-	ENSRROP00000040800	202 (aa)	-	A0A2K6RIG7
ENSRROT00000065284	PYM1-202	135	-	ENSRROP00000040791	44 (aa)	-	A0A2K6RID2

Gene Model

Click here to download ENSRROG00000043620's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03013	RNA transport	KEGG
rro03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000043620's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000043620	PYM1	100	99.015	ENSG00000170473	PYM1	100	99.015	Homo_sapiens
ENSRROG00000043620	PYM1	99	58.411	ENSAPOG00000023045	pym1	94	58.537	Acanthochromis_polyacanthus
ENSRROG00000043620	PYM1	93	92.021	ENSAMEG00000003091	PYM1	93	92.021	Ailuropoda_melanoleuca
ENSRROG00000043620	PYM1	99	60.648	ENSACIG00000012769	pym1	94	59.903	Amphilophus_citrinellus
ENSRROG00000043620	PYM1	99	58.294	ENSAOCG00000021358	pym1	94	59.314	Amphiprion_ocellaris
ENSRROG00000043620	PYM1	99	58.294	ENSAPEG00000022679	pym1	94	59.314	Amphiprion_percula
ENSRROG00000043620	PYM1	99	57.277	ENSATEG00000024022	pym1	94	59.709	Anabas_testudineus
ENSRROG00000043620	PYM1	94	69.756	ENSACAG00000005714	PYM1	94	69.756	Anolis_carolinensis
ENSRROG00000043620	PYM1	100	98.030	ENSANAG00000036967	PYM1	100	98.030	Aotus_nancymaae
ENSRROG00000043620	PYM1	100	57.339	ENSAMXG00000007650	pym1	94	60.194	Astyanax_mexicanus
ENSRROG00000043620	PYM1	94	95.288	ENSBTAG00000031146	PYM1	94	95.288	Bos_taurus
ENSRROG00000043620	PYM1	100	98.030	ENSCJAG00000041077	PYM1	100	98.030	Callithrix_jacchus
ENSRROG00000043620	PYM1	100	97.537	ENSCAFG00000000076	PYM1	100	97.537	Canis_familiaris
ENSRROG00000043620	PYM1	100	97.537	ENSCAFG00020026099	PYM1	100	97.537	Canis_lupus_dingo
ENSRROG00000043620	PYM1	94	92.670	ENSCHIG00000026207	PYM1	94	92.670	Capra_hircus
ENSRROG00000043620	PYM1	94	94.241	ENSTSYG00000000787	PYM1	94	94.241	Carlito_syrichta
ENSRROG00000043620	PYM1	89	92.179	ENSCAPG00000010374	PYM1	94	92.179	Cavia_aperea
ENSRROG00000043620	PYM1	94	92.670	ENSCPOG00000031546	PYM1	94	92.670	Cavia_porcellus
ENSRROG00000043620	PYM1	100	98.522	ENSCCAG00000026187	PYM1	100	98.522	Cebus_capucinus
ENSRROG00000043620	PYM1	100	100.000	ENSCATG00000018801	PYM1	100	100.000	Cercocebus_atys
ENSRROG00000043620	PYM1	94	88.482	ENSCLAG00000007964	PYM1	94	88.482	Chinchilla_lanigera
ENSRROG00000043620	PYM1	95	100.000	ENSCSAG00000005291	PYM1	99	99.482	Chlorocebus_sabaeus
ENSRROG00000043620	PYM1	98	40.094	ENSCING00000006448	-	93	39.196	Ciona_intestinalis
ENSRROG00000043620	PYM1	98	36.111	ENSCSAVG00000009805	-	89	40.976	Ciona_savignyi
ENSRROG00000043620	PYM1	100	100.000	ENSCANG00000020338	-	100	100.000	Colobus_angolensis_palliatus
ENSRROG00000043620	PYM1	98	90.404	ENSCANG00000019757	-	86	95.263	Colobus_angolensis_palliatus
ENSRROG00000043620	PYM1	94	90.052	ENSCGRG00001018051	-	94	90.052	Cricetulus_griseus_chok1gshd
ENSRROG00000043620	PYM1	94	74.869	ENSCGRG00001004231	-	93	74.869	Cricetulus_griseus_chok1gshd
ENSRROG00000043620	PYM1	94	74.869	ENSCGRG00000018933	-	93	74.869	Cricetulus_griseus_crigri
ENSRROG00000043620	PYM1	94	90.052	ENSCGRG00000012495	-	94	90.052	Cricetulus_griseus_crigri
ENSRROG00000043620	PYM1	94	56.373	ENSCSEG00000021531	pym1	94	58.621	Cynoglossus_semilaevis
ENSRROG00000043620	PYM1	95	59.804	ENSCVAG00000017360	pym1	82	59.487	Cyprinodon_variegatus
ENSRROG00000043620	PYM1	99	58.000	ENSDARG00000046024	pym1	94	57.949	Danio_rerio
ENSRROG00000043620	PYM1	94	92.147	ENSDNOG00000048414	PYM1	86	92.147	Dasypus_novemcinctus
ENSRROG00000043620	PYM1	94	93.717	ENSDORG00000029448	Pym1	94	93.717	Dipodomys_ordii
ENSRROG00000043620	PYM1	93	34.951	FBgn0034918	Pym	88	35.385	Drosophila_melanogaster
ENSRROG00000043620	PYM1	89	87.778	ENSETEG00000004461	-	94	87.778	Echinops_telfairi
ENSRROG00000043620	PYM1	93	92.021	ENSEASG00005002271	PYM1	81	96.067	Equus_asinus_asinus
ENSRROG00000043620	PYM1	100	96.552	ENSECAG00000011870	PYM1	100	96.552	Equus_caballus
ENSRROG00000043620	PYM1	96	58.291	ENSELUG00000024250	pym1	94	59.184	Esox_lucius
ENSRROG00000043620	PYM1	94	95.812	ENSFCAG00000013967	PYM1	94	95.812	Felis_catus
ENSRROG00000043620	PYM1	94	93.194	ENSFDAG00000006314	PYM1	94	93.194	Fukomys_damarensis
ENSRROG00000043620	PYM1	94	58.911	ENSFHEG00000005884	pym1	94	58.911	Fundulus_heteroclitus
ENSRROG00000043620	PYM1	94	55.779	ENSGMOG00000007239	pym1	93	55.779	Gadus_morhua
ENSRROG00000043620	PYM1	94	70.256	ENSGALG00000046169	PYM1	94	71.066	Gallus_gallus
ENSRROG00000043620	PYM1	99	61.033	ENSGAFG00000003280	pym1	93	61.194	Gambusia_affinis
ENSRROG00000043620	PYM1	100	55.340	ENSGACG00000010703	pym1	94	55.897	Gasterosteus_aculeatus
ENSRROG00000043620	PYM1	92	64.706	ENSGAGG00000001973	PYM1	88	64.706	Gopherus_agassizii
ENSRROG00000043620	PYM1	100	98.522	ENSGGOG00000043246	PYM1	100	98.522	Gorilla_gorilla
ENSRROG00000043620	PYM1	94	59.804	ENSHBUG00000012719	pym1	94	60.784	Haplochromis_burtoni
ENSRROG00000043620	PYM1	94	94.241	ENSHGLG00000017155	PYM1	94	94.241	Heterocephalus_glaber_female
ENSRROG00000043620	PYM1	94	94.241	ENSHGLG00100015341	PYM1	94	94.241	Heterocephalus_glaber_male
ENSRROG00000043620	PYM1	99	58.095	ENSHCOG00000007987	pym1	80	58.586	Hippocampus_comes
ENSRROG00000043620	PYM1	100	59.447	ENSIPUG00000005975	wibga	94	59.512	Ictalurus_punctatus
ENSRROG00000043620	PYM1	94	95.812	ENSSTOG00000014206	PYM1	94	95.812	Ictidomys_tridecemlineatus
ENSRROG00000043620	PYM1	94	90.576	ENSJJAG00000013338	Pym1	94	90.576	Jaculus_jaculus
ENSRROG00000043620	PYM1	99	56.757	ENSKMAG00000006351	pym1	95	55.869	Kryptolebias_marmoratus
ENSRROG00000043620	PYM1	99	59.615	ENSLBEG00000015707	pym1	94	59.296	Labrus_bergylta
ENSRROG00000043620	PYM1	89	61.780	ENSLACG00000014398	PYM1	90	61.140	Latimeria_chalumnae
ENSRROG00000043620	PYM1	94	93.717	ENSLAFG00000002369	PYM1	94	93.717	Loxodonta_africana
ENSRROG00000043620	PYM1	100	100.000	ENSMFAG00000003048	PYM1	100	100.000	Macaca_fascicularis
ENSRROG00000043620	PYM1	100	100.000	ENSMMUG00000011002	PYM1	100	100.000	Macaca_mulatta
ENSRROG00000043620	PYM1	100	100.000	ENSMNEG00000034677	PYM1	100	100.000	Macaca_nemestrina
ENSRROG00000043620	PYM1	100	100.000	ENSMLEG00000007971	PYM1	100	100.000	Mandrillus_leucophaeus
ENSRROG00000043620	PYM1	99	55.909	ENSMAMG00000001588	pym1	94	57.820	Mastacembelus_armatus
ENSRROG00000043620	PYM1	94	59.314	ENSMZEG00005026458	pym1	94	60.294	Maylandia_zebra
ENSRROG00000043620	PYM1	94	90.052	ENSMAUG00000007318	Pym1	94	90.052	Mesocricetus_auratus
ENSRROG00000043620	PYM1	94	95.812	ENSMICG00000032962	PYM1	94	95.812	Microcebus_murinus
ENSRROG00000043620	PYM1	94	87.958	ENSMOCG00000010208	Pym1	94	87.958	Microtus_ochrogaster
ENSRROG00000043620	PYM1	99	57.767	ENSMMOG00000009301	pym1	92	60.309	Mola_mola
ENSRROG00000043620	PYM1	99	58.491	ENSMALG00000013496	pym1	94	58.706	Monopterus_albus
ENSRROG00000043620	PYM1	94	90.052	MGP_CAROLIEiJ_G0015953	Pym1	94	90.052	Mus_caroli
ENSRROG00000043620	PYM1	94	91.099	ENSMUSG00000064030	Pym1	94	91.099	Mus_musculus
ENSRROG00000043620	PYM1	94	89.005	MGP_PahariEiJ_G0031131	Pym1	94	89.005	Mus_pahari
ENSRROG00000043620	PYM1	94	91.099	MGP_SPRETEiJ_G0016778	Pym1	94	91.099	Mus_spretus
ENSRROG00000043620	PYM1	100	97.537	ENSMPUG00000000931	PYM1	100	97.537	Mustela_putorius_furo
ENSRROG00000043620	PYM1	94	88.482	ENSMLUG00000003586	PYM1	90	92.818	Myotis_lucifugus
ENSRROG00000043620	PYM1	89	92.222	ENSNGAG00000019207	Pym1	90	89.785	Nannospalax_galili
ENSRROG00000043620	PYM1	99	60.563	ENSNBRG00000006951	pym1	94	60.784	Neolamprologus_brichardi
ENSRROG00000043620	PYM1	100	99.015	ENSNLEG00000017588	PYM1	100	99.015	Nomascus_leucogenys
ENSRROG00000043620	PYM1	88	79.213	ENSMEUG00000001017	PYM1	93	79.096	Notamacropus_eugenii
ENSRROG00000043620	PYM1	94	89.062	ENSOPRG00000007797	PYM1	94	89.062	Ochotona_princeps
ENSRROG00000043620	PYM1	94	94.241	ENSODEG00000004289	PYM1	94	94.241	Octodon_degus
ENSRROG00000043620	PYM1	94	58.937	ENSONIG00000016740	pym1	94	59.903	Oreochromis_niloticus
ENSRROG00000043620	PYM1	91	91.398	ENSOCUG00000025969	PYM1	83	91.398	Oryctolagus_cuniculus
ENSRROG00000043620	PYM1	99	61.722	ENSORLG00000030592	pym1	94	61.307	Oryzias_latipes
ENSRROG00000043620	PYM1	99	61.137	ENSORLG00020011264	pym1	94	61.194	Oryzias_latipes_hni
ENSRROG00000043620	PYM1	99	62.500	ENSORLG00015005287	pym1	94	62.121	Oryzias_latipes_hsok
ENSRROG00000043620	PYM1	99	62.136	ENSOMEG00000022250	pym1	94	61.421	Oryzias_melastigma
ENSRROG00000043620	PYM1	94	92.632	ENSOGAG00000007038	PYM1	93	92.632	Otolemur_garnettii
ENSRROG00000043620	PYM1	94	93.194	ENSOARG00000010856	PYM1	94	93.194	Ovis_aries
ENSRROG00000043620	PYM1	100	99.015	ENSPPAG00000043630	PYM1	100	99.015	Pan_paniscus
ENSRROG00000043620	PYM1	94	94.764	ENSPPRG00000013243	PYM1	94	94.764	Panthera_pardus
ENSRROG00000043620	PYM1	94	94.241	ENSPTIG00000017380	PYM1	94	94.241	Panthera_tigris_altaica
ENSRROG00000043620	PYM1	100	99.015	ENSPTRG00000005067	PYM1	100	99.015	Pan_troglodytes
ENSRROG00000043620	PYM1	100	99.507	ENSPANG00000009562	PYM1	100	99.507	Papio_anubis
ENSRROG00000043620	PYM1	100	60.849	ENSPKIG00000006301	pym1	94	60.000	Paramormyrops_kingsleyae
ENSRROG00000043620	PYM1	94	62.069	ENSPSIG00000003043	PYM1	94	63.547	Pelodiscus_sinensis
ENSRROG00000043620	PYM1	100	62.201	ENSPMGG00000023161	pym1	94	62.437	Periophthalmus_magnuspinnatus
ENSRROG00000043620	PYM1	94	89.005	ENSPEMG00000009372	Pym1	94	89.005	Peromyscus_maniculatus_bairdii
ENSRROG00000043620	PYM1	92	79.032	ENSPCIG00000024658	PYM1	91	78.723	Phascolarctos_cinereus
ENSRROG00000043620	PYM1	99	62.085	ENSPFOG00000008193	pym1	93	62.312	Poecilia_formosa
ENSRROG00000043620	PYM1	99	61.137	ENSPLAG00000009228	pym1	93	61.307	Poecilia_latipinna
ENSRROG00000043620	PYM1	99	61.137	ENSPMEG00000001505	pym1	93	61.307	Poecilia_mexicana
ENSRROG00000043620	PYM1	100	97.059	ENSPPYG00000004635	PYM1	100	97.059	Pongo_abelii
ENSRROG00000043620	PYM1	100	97.044	ENSPCOG00000019706	PYM1	100	97.044	Propithecus_coquereli
ENSRROG00000043620	PYM1	95	97.396	ENSPVAG00000011437	PYM1	100	95.408	Pteropus_vampyrus
ENSRROG00000043620	PYM1	94	61.084	ENSPNYG00000012871	pym1	94	60.591	Pundamilia_nyererei
ENSRROG00000043620	PYM1	99	58.257	ENSPNAG00000018833	pym1	94	58.852	Pygocentrus_nattereri
ENSRROG00000043620	PYM1	92	67.380	ENSRNOG00000049415	AABR07055413.1	91	62.234	Rattus_norvegicus
ENSRROG00000043620	PYM1	94	83.854	ENSRNOG00000058130	Pym1	94	83.854	Rattus_norvegicus
ENSRROG00000043620	PYM1	100	95.588	ENSRBIG00000033362	PYM1	100	95.588	Rhinopithecus_bieti
ENSRROG00000043620	PYM1	100	98.522	ENSSBOG00000029393	PYM1	100	98.522	Saimiri_boliviensis_boliviensis
ENSRROG00000043620	PYM1	93	80.423	ENSSHAG00000008280	PYM1	93	80.423	Sarcophilus_harrisii
ENSRROG00000043620	PYM1	93	64.062	ENSSFOG00015021475	pym1	94	63.590	Scleropages_formosus
ENSRROG00000043620	PYM1	99	58.768	ENSSMAG00000020912	pym1	94	60.396	Scophthalmus_maximus
ENSRROG00000043620	PYM1	99	56.744	ENSSDUG00000001807	pym1	94	59.420	Seriola_dumerili
ENSRROG00000043620	PYM1	99	60.976	ENSSLDG00000013730	pym1	94	62.944	Seriola_lalandi_dorsalis
ENSRROG00000043620	PYM1	89	91.111	ENSSARG00000009569	PYM1	94	91.111	Sorex_araneus
ENSRROG00000043620	PYM1	91	63.402	ENSSPUG00000015059	PYM1	92	63.077	Sphenodon_punctatus
ENSRROG00000043620	PYM1	99	57.477	ENSSPAG00000020100	pym1	94	57.971	Stegastes_partitus
ENSRROG00000043620	PYM1	94	94.241	ENSSSCG00000040825	PYM1	94	94.241	Sus_scrofa
ENSRROG00000043620	PYM1	99	58.654	ENSTRUG00000021367	pym1	93	59.694	Takifugu_rubripes
ENSRROG00000043620	PYM1	99	54.545	ENSTNIG00000012534	pym1	92	55.340	Tetraodon_nigroviridis
ENSRROG00000043620	PYM1	89	89.444	ENSTBEG00000004208	PYM1	94	89.444	Tupaia_belangeri
ENSRROG00000043620	PYM1	94	93.229	ENSTTRG00000014971	PYM1	94	94.022	Tursiops_truncatus
ENSRROG00000043620	PYM1	94	94.764	ENSUAMG00000014521	PYM1	94	94.764	Ursus_americanus
ENSRROG00000043620	PYM1	94	91.099	ENSUMAG00000016241	PYM1	82	93.923	Ursus_maritimus
ENSRROG00000043620	PYM1	100	96.552	ENSVVUG00000022749	PYM1	100	96.552	Vulpes_vulpes
ENSRROG00000043620	PYM1	94	62.564	ENSXETG00000021850	pym1	94	63.452	Xenopus_tropicalis
ENSRROG00000043620	PYM1	99	61.137	ENSXMAG00000011649	pym1	93	61.307	Xiphophorus_maculatus