EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000043919 (Gene tree)
Gene ID: 104666420
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 22440 bases
Position: chrKN296319.1:679460-701899
Accession: 104666420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000041418	CAF1	PF04857.20	2.6e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000065917	PNLDC1-201	1935	XM_010368492	ENSRROP00000041418	520 (aa)	XP_010366794	A0A2K6RK52

Gene Model

Click here to download ENSRROG00000043919's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000043919's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000043919	PNLDC1	99	95.761	ENSG00000146453	PNLDC1	99	95.761	Homo_sapiens
ENSRROG00000043919	PNLDC1	97	87.327	ENSAMEG00000015371	PNLDC1	95	87.327	Ailuropoda_melanoleuca
ENSRROG00000043919	PNLDC1	98	57.946	ENSAPLG00000007014	PNLDC1	98	57.946	Anas_platyrhynchos
ENSRROG00000043919	PNLDC1	97	60.277	ENSACAG00000013667	PNLDC1	95	60.277	Anolis_carolinensis
ENSRROG00000043919	PNLDC1	97	93.676	ENSANAG00000034713	PNLDC1	95	93.827	Aotus_nancymaae
ENSRROG00000043919	PNLDC1	98	87.377	ENSBTAG00000015166	PNLDC1	97	87.280	Bos_taurus
ENSRROG00000043919	PNLDC1	97	93.281	ENSCJAG00000011865	PNLDC1	99	93.267	Callithrix_jacchus
ENSRROG00000043919	PNLDC1	97	87.945	ENSCAFG00000000740	PNLDC1	95	87.945	Canis_familiaris
ENSRROG00000043919	PNLDC1	97	85.827	ENSCAFG00020017742	PNLDC1	95	85.827	Canis_lupus_dingo
ENSRROG00000043919	PNLDC1	97	85.207	ENSCHIG00000003141	PNLDC1	98	82.718	Capra_hircus
ENSRROG00000043919	PNLDC1	97	89.723	ENSTSYG00000005606	PNLDC1	95	89.723	Carlito_syrichta
ENSRROG00000043919	PNLDC1	89	66.955	ENSCAPG00000011893	PNLDC1	89	66.955	Cavia_aperea
ENSRROG00000043919	PNLDC1	99	80.000	ENSCPOG00000019565	PNLDC1	97	80.000	Cavia_porcellus
ENSRROG00000043919	PNLDC1	97	94.071	ENSCCAG00000026232	PNLDC1	95	94.071	Cebus_capucinus
ENSRROG00000043919	PNLDC1	97	99.209	ENSCATG00000033196	PNLDC1	95	99.209	Cercocebus_atys
ENSRROG00000043919	PNLDC1	97	84.752	ENSCLAG00000003228	PNLDC1	95	84.752	Chinchilla_lanigera
ENSRROG00000043919	PNLDC1	100	97.510	ENSCSAG00000012478	PNLDC1	100	97.510	Chlorocebus_sabaeus
ENSRROG00000043919	PNLDC1	96	66.333	ENSCPBG00000004050	PNLDC1	97	66.333	Chrysemys_picta_bellii
ENSRROG00000043919	PNLDC1	100	99.038	ENSCANG00000043076	PNLDC1	100	99.038	Colobus_angolensis_palliatus
ENSRROG00000043919	PNLDC1	97	66.206	ENSCGRG00001011981	-	94	66.206	Cricetulus_griseus_chok1gshd
ENSRROG00000043919	PNLDC1	97	82.411	ENSCGRG00001007470	-	95	82.411	Cricetulus_griseus_chok1gshd
ENSRROG00000043919	PNLDC1	97	68.379	ENSCGRG00000003103	-	94	68.379	Cricetulus_griseus_crigri
ENSRROG00000043919	PNLDC1	97	82.411	ENSCGRG00000010221	-	95	82.411	Cricetulus_griseus_crigri
ENSRROG00000043919	PNLDC1	97	85.799	ENSDNOG00000013709	PNLDC1	95	85.799	Dasypus_novemcinctus
ENSRROG00000043919	PNLDC1	97	80.943	ENSDORG00000011517	Pnldc1	91	88.889	Dipodomys_ordii
ENSRROG00000043919	PNLDC1	94	75.565	ENSETEG00000007587	PNLDC1	98	75.565	Echinops_telfairi
ENSRROG00000043919	PNLDC1	97	79.576	ENSEASG00005019029	PNLDC1	95	79.576	Equus_asinus_asinus
ENSRROG00000043919	PNLDC1	97	88.735	ENSECAG00000012898	PNLDC1	95	88.735	Equus_caballus
ENSRROG00000043919	PNLDC1	69	81.250	ENSEEUG00000005717	-	86	81.250	Erinaceus_europaeus
ENSRROG00000043919	PNLDC1	97	87.945	ENSFCAG00000002848	PNLDC1	95	87.945	Felis_catus
ENSRROG00000043919	PNLDC1	96	56.660	ENSFALG00000012081	PNLDC1	99	56.660	Ficedula_albicollis
ENSRROG00000043919	PNLDC1	97	85.573	ENSFDAG00000021334	PNLDC1	95	85.573	Fukomys_damarensis
ENSRROG00000043919	PNLDC1	76	58.838	ENSGALG00000011624	PNLDC1	77	58.838	Gallus_gallus
ENSRROG00000043919	PNLDC1	99	66.925	ENSGAGG00000015276	PNLDC1	100	67.769	Gopherus_agassizii
ENSRROG00000043919	PNLDC1	97	96.443	ENSGGOG00000014077	PNLDC1	95	96.443	Gorilla_gorilla
ENSRROG00000043919	PNLDC1	97	85.771	ENSHGLG00000006889	PNLDC1	95	85.771	Heterocephalus_glaber_female
ENSRROG00000043919	PNLDC1	97	85.771	ENSHGLG00100018275	PNLDC1	95	85.771	Heterocephalus_glaber_male
ENSRROG00000043919	PNLDC1	97	89.286	ENSSTOG00000005595	PNLDC1	95	89.286	Ictidomys_tridecemlineatus
ENSRROG00000043919	PNLDC1	97	80.435	ENSJJAG00000009937	Pnldc1	95	80.435	Jaculus_jaculus
ENSRROG00000043919	PNLDC1	56	86.207	ENSLAFG00000030189	PNLDC1	85	86.207	Loxodonta_africana
ENSRROG00000043919	PNLDC1	97	99.407	ENSMFAG00000041296	PNLDC1	95	99.407	Macaca_fascicularis
ENSRROG00000043919	PNLDC1	100	96.780	ENSMMUG00000004181	PNLDC1	100	96.780	Macaca_mulatta
ENSRROG00000043919	PNLDC1	97	99.407	ENSMNEG00000034271	PNLDC1	95	99.407	Macaca_nemestrina
ENSRROG00000043919	PNLDC1	97	95.257	ENSMLEG00000044059	PNLDC1	95	95.257	Mandrillus_leucophaeus
ENSRROG00000043919	PNLDC1	98	57.957	ENSMGAG00000012470	PNLDC1	97	57.957	Meleagris_gallopavo
ENSRROG00000043919	PNLDC1	97	67.456	ENSMAUG00000012298	Pnldc1	95	67.456	Mesocricetus_auratus
ENSRROG00000043919	PNLDC1	97	88.340	ENSMICG00000008021	PNLDC1	95	88.340	Microcebus_murinus
ENSRROG00000043919	PNLDC1	97	86.220	ENSMOCG00000014287	Pnldc1	95	86.220	Microtus_ochrogaster
ENSRROG00000043919	PNLDC1	97	76.190	ENSMODG00000007420	PNLDC1	94	76.190	Monodelphis_domestica
ENSRROG00000043919	PNLDC1	97	85.573	MGP_CAROLIEiJ_G0021045	Pnldc1	95	85.573	Mus_caroli
ENSRROG00000043919	PNLDC1	97	85.968	ENSMUSG00000073460	Pnldc1	92	90.000	Mus_musculus
ENSRROG00000043919	PNLDC1	97	86.364	MGP_PahariEiJ_G0023361	Pnldc1	95	86.364	Mus_pahari
ENSRROG00000043919	PNLDC1	97	85.771	MGP_SPRETEiJ_G0021975	Pnldc1	95	85.771	Mus_spretus
ENSRROG00000043919	PNLDC1	97	86.337	ENSMPUG00000004920	PNLDC1	95	86.337	Mustela_putorius_furo
ENSRROG00000043919	PNLDC1	97	87.154	ENSMLUG00000000747	PNLDC1	95	87.154	Myotis_lucifugus
ENSRROG00000043919	PNLDC1	97	87.352	ENSNGAG00000017714	Pnldc1	95	87.352	Nannospalax_galili
ENSRROG00000043919	PNLDC1	100	94.423	ENSNLEG00000011282	PNLDC1	100	94.423	Nomascus_leucogenys
ENSRROG00000043919	PNLDC1	62	62.813	ENSMEUG00000011926	-	64	62.813	Notamacropus_eugenii
ENSRROG00000043919	PNLDC1	55	67.014	ENSMEUG00000014042	-	100	67.014	Notamacropus_eugenii
ENSRROG00000043919	PNLDC1	72	86.096	ENSOPRG00000003813	PNLDC1	70	86.096	Ochotona_princeps
ENSRROG00000043919	PNLDC1	97	84.387	ENSODEG00000008047	PNLDC1	95	84.387	Octodon_degus
ENSRROG00000043919	PNLDC1	96	59.363	ENSOANG00000012199	PNLDC1	95	60.516	Ornithorhynchus_anatinus
ENSRROG00000043919	PNLDC1	97	87.154	ENSOCUG00000013867	PNLDC1	95	87.154	Oryctolagus_cuniculus
ENSRROG00000043919	PNLDC1	97	89.286	ENSOGAG00000007331	PNLDC1	95	89.286	Otolemur_garnettii
ENSRROG00000043919	PNLDC1	97	85.178	ENSOARG00000004585	PNLDC1	95	85.178	Ovis_aries
ENSRROG00000043919	PNLDC1	97	95.652	ENSPPAG00000026651	PNLDC1	95	95.652	Pan_paniscus
ENSRROG00000043919	PNLDC1	97	87.945	ENSPPRG00000012854	PNLDC1	95	87.945	Panthera_pardus
ENSRROG00000043919	PNLDC1	98	84.630	ENSPTIG00000011501	PNLDC1	97	84.630	Panthera_tigris_altaica
ENSRROG00000043919	PNLDC1	100	94.808	ENSPTRG00000018762	PNLDC1	100	94.808	Pan_troglodytes
ENSRROG00000043919	PNLDC1	97	99.407	ENSPANG00000022009	PNLDC1	95	99.407	Papio_anubis
ENSRROG00000043919	PNLDC1	62	56.000	ENSPSIG00000011419	PNLDC1	99	56.000	Pelodiscus_sinensis
ENSRROG00000043919	PNLDC1	97	86.364	ENSPEMG00000016301	Pnldc1	95	86.364	Peromyscus_maniculatus_bairdii
ENSRROG00000043919	PNLDC1	84	76.082	ENSPCIG00000023412	PNLDC1	100	76.082	Phascolarctos_cinereus
ENSRROG00000043919	PNLDC1	97	88.166	ENSPPYG00000017148	PNLDC1	95	88.166	Pongo_abelii
ENSRROG00000043919	PNLDC1	97	75.348	ENSPCAG00000014169	PNLDC1	95	75.348	Procavia_capensis
ENSRROG00000043919	PNLDC1	97	88.340	ENSPCOG00000025722	PNLDC1	95	88.340	Propithecus_coquereli
ENSRROG00000043919	PNLDC1	69	91.111	ENSPVAG00000005325	PNLDC1	68	91.111	Pteropus_vampyrus
ENSRROG00000043919	PNLDC1	97	85.771	ENSRNOG00000023140	Pnldc1	100	86.875	Rattus_norvegicus
ENSRROG00000043919	PNLDC1	97	99.605	ENSRBIG00000033806	PNLDC1	95	99.605	Rhinopithecus_bieti
ENSRROG00000043919	PNLDC1	97	94.071	ENSSBOG00000019135	PNLDC1	95	94.071	Saimiri_boliviensis_boliviensis
ENSRROG00000043919	PNLDC1	97	76.680	ENSSHAG00000015192	PNLDC1	97	76.680	Sarcophilus_harrisii
ENSRROG00000043919	PNLDC1	55	66.090	ENSSPUG00000004627	PNLDC1	99	66.518	Sphenodon_punctatus
ENSRROG00000043919	PNLDC1	99	84.990	ENSSSCG00000004046	PNLDC1	100	84.990	Sus_scrofa
ENSRROG00000043919	PNLDC1	93	57.732	ENSTGUG00000011418	PNLDC1	99	57.732	Taeniopygia_guttata
ENSRROG00000043919	PNLDC1	99	77.864	ENSTBEG00000009131	PNLDC1	99	77.864	Tupaia_belangeri
ENSRROG00000043919	PNLDC1	69	82.825	ENSTTRG00000010409	PNLDC1	68	82.825	Tursiops_truncatus
ENSRROG00000043919	PNLDC1	97	74.175	ENSUAMG00000015783	PNLDC1	95	74.175	Ursus_americanus
ENSRROG00000043919	PNLDC1	97	80.000	ENSUMAG00000011903	PNLDC1	99	80.000	Ursus_maritimus
ENSRROG00000043919	PNLDC1	93	88.889	ENSVVUG00000006586	PNLDC1	99	87.885	Vulpes_vulpes