EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000043949 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: matrin-3 pseudogene
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 6600 bases
Position: chrKN296508.1:1147352-1153951
Accession: 104667511
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000041520	RRM_5	PF13893.6	6e-07	1	2
ENSRROP00000041520	RRM_5	PF13893.6	6e-07	2	2
ENSRROP00000041527	RRM_5	PF13893.6	1.4e-06	1	2
ENSRROP00000041527	RRM_5	PF13893.6	1.4e-06	2	2
ENSRROP00000041531	RRM_5	PF13893.6	1.7e-06	1	2
ENSRROP00000041531	RRM_5	PF13893.6	1.7e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000066027	-	2394	-	ENSRROP00000041527	797 (aa)	-	A0A2K6RKI3
ENSRROT00000066031	-	2523	-	ENSRROP00000041531	840 (aa)	-	A0A2K6RKH4
ENSRROT00000066020	-	1695	-	ENSRROP00000041520	564 (aa)	-	A0A2K6RKH2

Gene Model

Click here to download ENSRROG00000043949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000043949's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000043949	-	100	97.619	ENSRROG00000039415	-	100	99.018

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000043949	-	100	97.757	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSRROG00000043949	-	99	92.411	ENSAMEG00000011347	-	100	92.411	Ailuropoda_melanoleuca
ENSRROG00000043949	-	100	76.445	ENSAPLG00000008118	-	77	84.659	Anas_platyrhynchos
ENSRROG00000043949	-	99	70.880	ENSACAG00000016233	-	99	70.237	Anolis_carolinensis
ENSRROG00000043949	-	80	71.273	ENSANAG00000024654	-	99	71.429	Aotus_nancymaae
ENSRROG00000043949	-	100	97.285	ENSANAG00000022951	-	100	97.285	Aotus_nancymaae
ENSRROG00000043949	-	95	33.183	ENSAMXG00000010681	matr3l1.1	77	31.151	Astyanax_mexicanus
ENSRROG00000043949	-	98	91.786	ENSBTAG00000006756	MATR3	99	91.786	Bos_taurus
ENSRROG00000043949	-	99	96.223	ENSCJAG00000006888	-	99	97.835	Callithrix_jacchus
ENSRROG00000043949	-	100	97.055	ENSCAFG00000001345	MATR3	100	97.055	Canis_familiaris
ENSRROG00000043949	-	100	94.444	ENSCAFG00020010504	-	98	97.079	Canis_lupus_dingo
ENSRROG00000043949	-	100	97.291	ENSCHIG00000025746	-	100	97.291	Capra_hircus
ENSRROG00000043949	-	100	97.403	ENSTSYG00000011028	-	100	97.403	Carlito_syrichta
ENSRROG00000043949	-	99	97.163	ENSCPOG00000014076	-	99	97.163	Cavia_porcellus
ENSRROG00000043949	-	100	97.639	ENSCCAG00000025074	-	100	97.639	Cebus_capucinus
ENSRROG00000043949	-	98	97.127	ENSCATG00000041304	-	99	97.127	Cercocebus_atys
ENSRROG00000043949	-	99	97.400	ENSCLAG00000015998	-	99	97.400	Chinchilla_lanigera
ENSRROG00000043949	-	100	97.993	ENSCSAG00000013075	-	100	97.993	Chlorocebus_sabaeus
ENSRROG00000043949	-	100	75.246	ENSCPBG00000006303	-	77	84.615	Chrysemys_picta_bellii
ENSRROG00000043949	-	100	96.576	ENSCANG00000028224	-	100	96.576	Colobus_angolensis_palliatus
ENSRROG00000043949	-	100	97.048	ENSCGRG00001020227	Matr3	100	97.048	Cricetulus_griseus_chok1gshd
ENSRROG00000043949	-	100	96.930	ENSCGRG00000011298	Matr3	100	96.930	Cricetulus_griseus_crigri
ENSRROG00000043949	-	97	32.143	ENSCSEG00000012682	matr3l1.1	90	32.308	Cynoglossus_semilaevis
ENSRROG00000043949	-	80	37.719	ENSCVAG00000005337	matr3l1.1	81	30.531	Cyprinodon_variegatus
ENSRROG00000043949	-	100	91.982	ENSDNOG00000037723	-	100	91.982	Dasypus_novemcinctus
ENSRROG00000043949	-	100	97.527	ENSEASG00005020857	-	100	97.527	Equus_asinus_asinus
ENSRROG00000043949	-	100	97.409	ENSECAG00000012882	MATR3	100	97.409	Equus_caballus
ENSRROG00000043949	-	74	49.123	ENSELUG00000021848	matr3l1.1	74	51.515	Esox_lucius
ENSRROG00000043949	-	75	42.718	ENSELUG00000021651	si:ch211-271b14.1	83	42.718	Esox_lucius
ENSRROG00000043949	-	100	97.409	ENSFCAG00000021911	-	100	97.409	Felis_catus
ENSRROG00000043949	-	100	74.726	ENSFALG00000003071	-	77	83.972	Ficedula_albicollis
ENSRROG00000043949	-	100	96.458	ENSFDAG00000017675	-	100	96.458	Fukomys_damarensis
ENSRROG00000043949	-	100	75.794	ENSGALG00000002478	MATR3	100	72.648	Gallus_gallus
ENSRROG00000043949	-	100	75.082	ENSGAGG00000011386	-	77	84.615	Gopherus_agassizii
ENSRROG00000043949	-	100	97.875	ENSGGOG00000007308	-	100	97.875	Gorilla_gorilla
ENSRROG00000043949	-	100	97.639	ENSHGLG00000004673	MATR3	100	97.639	Heterocephalus_glaber_female
ENSRROG00000043949	-	90	98.035	ENSHGLG00100006442	-	100	98.035	Heterocephalus_glaber_male
ENSRROG00000043949	-	61	49.057	ENSHCOG00000013223	matr3l1.1	69	32.472	Hippocampus_comes
ENSRROG00000043949	-	100	97.409	ENSSTOG00000014746	-	100	97.409	Ictidomys_tridecemlineatus
ENSRROG00000043949	-	100	96.222	ENSJJAG00000021710	-	100	96.222	Jaculus_jaculus
ENSRROG00000043949	-	90	69.863	ENSJJAG00000011022	-	100	68.689	Jaculus_jaculus
ENSRROG00000043949	-	63	43.210	ENSLBEG00000018267	matr3l1.1	72	43.210	Labrus_bergylta
ENSRROG00000043949	-	99	54.723	ENSLACG00000006743	-	99	55.917	Latimeria_chalumnae
ENSRROG00000043949	-	98	97.307	ENSMFAG00000000634	-	99	97.307	Macaca_fascicularis
ENSRROG00000043949	-	63	96.192	ENSMMUG00000015963	-	98	96.192	Macaca_mulatta
ENSRROG00000043949	-	98	98.101	ENSMMUG00000016741	MATR3	99	98.101	Macaca_mulatta
ENSRROG00000043949	-	100	98.111	ENSMNEG00000042856	-	100	98.111	Macaca_nemestrina
ENSRROG00000043949	-	100	98.111	ENSMLEG00000041178	-	100	98.111	Mandrillus_leucophaeus
ENSRROG00000043949	-	74	48.235	ENSMAMG00000013840	matr3l1.1	77	36.905	Mastacembelus_armatus
ENSRROG00000043949	-	100	75.685	ENSMGAG00000001331	-	77	83.761	Meleagris_gallopavo
ENSRROG00000043949	-	100	96.812	ENSMAUG00000011647	Matr3	100	96.812	Mesocricetus_auratus
ENSRROG00000043949	-	97	95.064	ENSMICG00000012438	-	99	97.211	Microcebus_murinus
ENSRROG00000043949	-	100	96.812	ENSMOCG00000015711	Matr3	100	96.812	Microtus_ochrogaster
ENSRROG00000043949	-	100	89.461	ENSMODG00000011925	-	99	87.705	Monodelphis_domestica
ENSRROG00000043949	-	100	96.930	MGP_CAROLIEiJ_G0022108	Matr3	100	97.053	Mus_caroli
ENSRROG00000043949	-	100	96.930	ENSMUSG00000037236	Matr3	100	96.930	Mus_musculus
ENSRROG00000043949	-	100	96.930	MGP_PahariEiJ_G0018842	Matr3	100	97.053	Mus_pahari
ENSRROG00000043949	-	100	96.576	MGP_SPRETEiJ_G0023020	Matr3	100	96.576	Mus_spretus
ENSRROG00000043949	-	100	95.833	ENSMPUG00000009297	-	100	95.833	Mustela_putorius_furo
ENSRROG00000043949	-	100	96.118	ENSMLUG00000005798	-	99	96.118	Myotis_lucifugus
ENSRROG00000043949	-	100	97.048	ENSNGAG00000017452	Matr3	100	97.048	Nannospalax_galili
ENSRROG00000043949	-	100	98.111	ENSNLEG00000009093	-	100	98.111	Nomascus_leucogenys
ENSRROG00000043949	-	99	89.492	ENSOPRG00000016511	-	100	87.232	Ochotona_princeps
ENSRROG00000043949	-	99	97.045	ENSODEG00000003015	-	99	97.045	Octodon_degus
ENSRROG00000043949	-	100	97.521	ENSOCUG00000026311	MATR3	100	97.521	Oryctolagus_cuniculus
ENSRROG00000043949	-	73	36.364	ENSORLG00020009362	matr3l1.1	80	33.333	Oryzias_latipes_hni
ENSRROG00000043949	-	65	44.565	ENSORLG00015018551	matr3l1.1	80	33.333	Oryzias_latipes_hsok
ENSRROG00000043949	-	77	40.351	ENSOMEG00000022287	matr3l1.1	89	37.984	Oryzias_melastigma
ENSRROG00000043949	-	100	98.111	ENSOGAG00000010607	-	100	98.111	Otolemur_garnettii
ENSRROG00000043949	-	100	97.291	ENSOARG00000016931	-	99	97.291	Ovis_aries
ENSRROG00000043949	-	99	96.768	ENSPPAG00000001418	-	100	96.768	Pan_paniscus
ENSRROG00000043949	-	98	91.712	ENSPPAG00000026720	-	99	92.701	Pan_paniscus
ENSRROG00000043949	-	100	97.527	ENSPPRG00000008004	-	100	97.527	Panthera_pardus
ENSRROG00000043949	-	97	97.818	ENSPTIG00000010711	-	100	97.414	Panthera_tigris_altaica
ENSRROG00000043949	-	99	97.127	ENSPTRG00000017294	MATR3	100	97.127	Pan_troglodytes
ENSRROG00000043949	-	100	96.694	ENSPANG00000012018	-	100	96.694	Papio_anubis
ENSRROG00000043949	-	99	97.666	ENSPANG00000032489	-	100	97.666	Papio_anubis
ENSRROG00000043949	-	95	35.069	ENSPKIG00000000333	matr3l1.1	75	33.141	Paramormyrops_kingsleyae
ENSRROG00000043949	-	100	75.821	ENSPSIG00000014598	-	77	84.900	Pelodiscus_sinensis
ENSRROG00000043949	-	100	96.458	ENSPEMG00000020679	Matr3	100	96.458	Peromyscus_maniculatus_bairdii
ENSRROG00000043949	-	100	92.849	ENSPPYG00000015835	-	100	92.849	Pongo_abelii
ENSRROG00000043949	-	100	97.521	ENSPCOG00000025718	-	100	97.521	Propithecus_coquereli
ENSRROG00000043949	-	98	92.491	ENSPVAG00000015431	-	100	92.491	Pteropus_vampyrus
ENSRROG00000043949	-	52	46.512	ENSPNYG00000015855	-	96	46.512	Pundamilia_nyererei
ENSRROG00000043949	-	100	96.458	ENSRNOG00000019875	Matr3	100	96.458	Rattus_norvegicus
ENSRROG00000043949	-	98	97.307	ENSRBIG00000034713	-	99	97.307	Rhinopithecus_bieti
ENSRROG00000043949	-	100	97.521	ENSSBOG00000030159	-	100	97.521	Saimiri_boliviensis_boliviensis
ENSRROG00000043949	-	100	89.578	ENSSHAG00000010331	-	99	87.822	Sarcophilus_harrisii
ENSRROG00000043949	-	61	55.556	ENSSDUG00000015369	matr3l1.1	79	35.714	Seriola_dumerili
ENSRROG00000043949	-	99	74.726	ENSSPUG00000019236	-	99	73.707	Sphenodon_punctatus
ENSRROG00000043949	-	100	97.409	ENSSSCG00000014343	-	100	97.409	Sus_scrofa
ENSRROG00000043949	-	99	75.575	ENSTGUG00000014568	MATR3	77	84.113	Taeniopygia_guttata
ENSRROG00000043949	-	51	36.866	ENSTRUG00000001692	-	85	35.192	Takifugu_rubripes
ENSRROG00000043949	-	60	57.143	ENSTNIG00000003166	matr3l1.1	74	57.143	Tetraodon_nigroviridis
ENSRROG00000043949	-	89	97.218	ENSUAMG00000000097	-	97	97.218	Ursus_americanus
ENSRROG00000043949	-	100	96.938	ENSUMAG00000015808	-	100	96.938	Ursus_maritimus
ENSRROG00000043949	-	100	91.657	ENSVPAG00000006337	-	100	91.657	Vicugna_pacos
ENSRROG00000043949	-	100	97.291	ENSVVUG00000020287	-	100	97.291	Vulpes_vulpes
ENSRROG00000043949	-	100	51.690	ENSXETG00000003838	matr3	75	57.554	Xenopus_tropicalis
ENSRROG00000043949	-	68	34.343	ENSXMAG00000014107	-	88	30.000	Xiphophorus_maculatus