EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000044400 (Gene tree)
Gene ID: 104666944
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 91467 bases
Position: chrKN296435.1:2207382-2298848
Accession: 104666944
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000042541	XRN_N	PF03159.18	1.7e-102	1	1
ENSRROP00000042537	XRN_N	PF03159.18	1.8e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000067050	XRN2-202	4018	XM_010369102	ENSRROP00000042541	1051 (aa)	XP_010367404	A0A2K6RNF5
ENSRROT00000067046	XRN2-201	6286	-	ENSRROP00000042537	1063 (aa)	-	A0A2K6RNC5

Gene Model

Click here to download ENSRROG00000044400's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03008	Ribosome biogenesis in eukaryotes	KEGG
rro03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000044400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000044400	XRN2	90	99.684	ENSG00000088930	XRN2	100	99.684	Homo_sapiens
ENSRROG00000044400	XRN2	88	71.489	ENSAPOG00000009818	xrn2	100	70.336	Acanthochromis_polyacanthus
ENSRROG00000044400	XRN2	90	98.211	ENSAMEG00000012581	XRN2	100	98.211	Ailuropoda_melanoleuca
ENSRROG00000044400	XRN2	81	70.421	ENSACIG00000015047	xrn2	95	74.280	Amphilophus_citrinellus
ENSRROG00000044400	XRN2	88	72.009	ENSAOCG00000023632	xrn2	100	70.863	Amphiprion_ocellaris
ENSRROG00000044400	XRN2	88	71.838	ENSAPEG00000014871	xrn2	100	70.672	Amphiprion_percula
ENSRROG00000044400	XRN2	86	71.398	ENSATEG00000001273	xrn2	97	70.719	Anabas_testudineus
ENSRROG00000044400	XRN2	88	83.100	ENSAPLG00000013869	XRN2	99	83.531	Anas_platyrhynchos
ENSRROG00000044400	XRN2	90	80.538	ENSACAG00000005565	XRN2	100	80.538	Anolis_carolinensis
ENSRROG00000044400	XRN2	90	98.842	ENSANAG00000020126	XRN2	100	98.842	Aotus_nancymaae
ENSRROG00000044400	XRN2	81	73.642	ENSACLG00000010522	xrn2	96	75.833	Astatotilapia_calliptera
ENSRROG00000044400	XRN2	90	71.414	ENSAMXG00000018301	xrn2	100	71.414	Astyanax_mexicanus
ENSRROG00000044400	XRN2	90	96.004	ENSBTAG00000011304	XRN2	100	96.004	Bos_taurus
ENSRROG00000044400	XRN2	78	55.930	WBGene00006964	xrn-2	89	55.204	Caenorhabditis_elegans
ENSRROG00000044400	XRN2	90	98.947	ENSCJAG00000005611	XRN2	100	98.947	Callithrix_jacchus
ENSRROG00000044400	XRN2	90	98.316	ENSCAFG00000005185	XRN2	100	98.316	Canis_familiaris
ENSRROG00000044400	XRN2	90	98.316	ENSCAFG00020027479	XRN2	100	98.316	Canis_lupus_dingo
ENSRROG00000044400	XRN2	90	96.425	ENSCHIG00000006921	XRN2	100	96.425	Capra_hircus
ENSRROG00000044400	XRN2	90	97.368	ENSTSYG00000008315	XRN2	100	97.368	Carlito_syrichta
ENSRROG00000044400	XRN2	88	82.093	ENSCAPG00000010773	XRN2	99	82.093	Cavia_aperea
ENSRROG00000044400	XRN2	90	97.684	ENSCPOG00000009407	XRN2	100	97.684	Cavia_porcellus
ENSRROG00000044400	XRN2	90	100.000	ENSCATG00000040350	XRN2	100	100.000	Cercocebus_atys
ENSRROG00000044400	XRN2	90	98.000	ENSCLAG00000013419	XRN2	100	98.000	Chinchilla_lanigera
ENSRROG00000044400	XRN2	90	100.000	ENSCSAG00000011094	XRN2	100	100.000	Chlorocebus_sabaeus
ENSRROG00000044400	XRN2	61	98.925	ENSCHOG00000013404	XRN2	70	98.925	Choloepus_hoffmanni
ENSRROG00000044400	XRN2	90	84.479	ENSCPBG00000023533	XRN2	100	85.104	Chrysemys_picta_bellii
ENSRROG00000044400	XRN2	78	60.263	ENSCING00000022336	-	100	60.621	Ciona_intestinalis
ENSRROG00000044400	XRN2	78	58.950	ENSCSAVG00000011217	-	100	61.407	Ciona_savignyi
ENSRROG00000044400	XRN2	90	100.000	ENSCANG00000040240	XRN2	100	100.000	Colobus_angolensis_palliatus
ENSRROG00000044400	XRN2	88	97.094	ENSCGRG00001010676	Xrn2	99	97.097	Cricetulus_griseus_chok1gshd
ENSRROG00000044400	XRN2	88	96.224	ENSCGRG00000006378	Xrn2	99	96.224	Cricetulus_griseus_crigri
ENSRROG00000044400	XRN2	81	71.494	ENSCVAG00000018999	xrn2	98	76.762	Cyprinodon_variegatus
ENSRROG00000044400	XRN2	90	69.713	ENSDARG00000101900	xrn2	96	77.629	Danio_rerio
ENSRROG00000044400	XRN2	90	97.684	ENSDNOG00000001895	XRN2	100	97.684	Dasypus_novemcinctus
ENSRROG00000044400	XRN2	90	95.895	ENSDORG00000005434	Xrn2	100	95.895	Dipodomys_ordii
ENSRROG00000044400	XRN2	78	56.832	FBgn0031868	Rat1	87	56.711	Drosophila_melanogaster
ENSRROG00000044400	XRN2	90	84.000	ENSETEG00000001740	XRN2	100	84.000	Echinops_telfairi
ENSRROG00000044400	XRN2	76	71.515	ENSEBUG00000016136	xrn2	100	71.515	Eptatretus_burgeri
ENSRROG00000044400	XRN2	90	97.895	ENSEASG00005002484	XRN2	100	97.895	Equus_asinus_asinus
ENSRROG00000044400	XRN2	90	98.099	ENSECAG00000018988	XRN2	100	96.178	Equus_caballus
ENSRROG00000044400	XRN2	73	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSRROG00000044400	XRN2	90	70.287	ENSELUG00000000552	xrn2	100	70.697	Esox_lucius
ENSRROG00000044400	XRN2	90	98.105	ENSFCAG00000007970	XRN2	100	98.105	Felis_catus
ENSRROG00000044400	XRN2	90	82.600	ENSFALG00000004508	XRN2	100	83.019	Ficedula_albicollis
ENSRROG00000044400	XRN2	90	97.789	ENSFDAG00000016311	XRN2	100	97.789	Fukomys_damarensis
ENSRROG00000044400	XRN2	78	72.661	ENSGMOG00000013436	xrn2	100	72.661	Gadus_morhua
ENSRROG00000044400	XRN2	90	82.723	ENSGALG00000008372	XRN2	100	82.723	Gallus_gallus
ENSRROG00000044400	XRN2	81	73.721	ENSGAFG00000014284	xrn2	98	73.721	Gambusia_affinis
ENSRROG00000044400	XRN2	79	74.399	ENSGACG00000011870	xrn2	100	74.399	Gasterosteus_aculeatus
ENSRROG00000044400	XRN2	90	84.271	ENSGAGG00000004884	XRN2	100	84.896	Gopherus_agassizii
ENSRROG00000044400	XRN2	90	99.895	ENSGGOG00000013738	XRN2	100	99.895	Gorilla_gorilla
ENSRROG00000044400	XRN2	90	96.632	ENSHGLG00000014831	XRN2	100	96.632	Heterocephalus_glaber_female
ENSRROG00000044400	XRN2	90	96.632	ENSHGLG00100013130	XRN2	100	96.632	Heterocephalus_glaber_male
ENSRROG00000044400	XRN2	90	67.915	ENSHCOG00000011994	xrn2	99	68.826	Hippocampus_comes
ENSRROG00000044400	XRN2	90	70.031	ENSIPUG00000006639	xrn2	100	70.031	Ictalurus_punctatus
ENSRROG00000044400	XRN2	90	98.526	ENSSTOG00000000589	XRN2	100	98.526	Ictidomys_tridecemlineatus
ENSRROG00000044400	XRN2	90	97.474	ENSJJAG00000022128	Xrn2	100	97.474	Jaculus_jaculus
ENSRROG00000044400	XRN2	85	76.863	ENSLACG00000008307	XRN2	99	79.387	Latimeria_chalumnae
ENSRROG00000044400	XRN2	90	72.699	ENSLOCG00000016874	xrn2	100	72.699	Lepisosteus_oculatus
ENSRROG00000044400	XRN2	90	96.421	ENSLAFG00000014624	XRN2	100	96.421	Loxodonta_africana
ENSRROG00000044400	XRN2	90	100.000	ENSMFAG00000038122	XRN2	100	100.000	Macaca_fascicularis
ENSRROG00000044400	XRN2	90	100.000	ENSMMUG00000011405	XRN2	100	100.000	Macaca_mulatta
ENSRROG00000044400	XRN2	90	99.895	ENSMNEG00000040626	XRN2	100	99.895	Macaca_nemestrina
ENSRROG00000044400	XRN2	90	99.895	ENSMLEG00000041897	XRN2	100	99.895	Mandrillus_leucophaeus
ENSRROG00000044400	XRN2	86	72.707	ENSMAMG00000008633	xrn2	98	71.188	Mastacembelus_armatus
ENSRROG00000044400	XRN2	81	75.491	ENSMZEG00005022362	xrn2	97	75.491	Maylandia_zebra
ENSRROG00000044400	XRN2	90	81.250	ENSMGAG00000003196	XRN2	99	81.250	Meleagris_gallopavo
ENSRROG00000044400	XRN2	90	97.158	ENSMAUG00000021842	Xrn2	100	97.158	Mesocricetus_auratus
ENSRROG00000044400	XRN2	90	97.684	ENSMICG00000008126	XRN2	100	97.684	Microcebus_murinus
ENSRROG00000044400	XRN2	90	96.316	ENSMOCG00000012588	Xrn2	100	96.316	Microtus_ochrogaster
ENSRROG00000044400	XRN2	81	73.654	ENSMMOG00000017576	xrn2	96	74.194	Mola_mola
ENSRROG00000044400	XRN2	90	91.263	ENSMODG00000006163	XRN2	100	91.263	Monodelphis_domestica
ENSRROG00000044400	XRN2	82	72.022	ENSMALG00000011355	xrn2	99	72.022	Monopterus_albus
ENSRROG00000044400	XRN2	90	95.899	MGP_CAROLIEiJ_G0024400	Xrn2	100	95.899	Mus_caroli
ENSRROG00000044400	XRN2	90	96.109	ENSMUSG00000027433	Xrn2	100	96.109	Mus_musculus
ENSRROG00000044400	XRN2	90	95.899	MGP_PahariEiJ_G0025843	Xrn2	100	95.899	Mus_pahari
ENSRROG00000044400	XRN2	90	96.109	MGP_SPRETEiJ_G0025318	Xrn2	100	96.109	Mus_spretus
ENSRROG00000044400	XRN2	96	94.244	ENSMPUG00000001198	XRN2	98	94.244	Mustela_putorius_furo
ENSRROG00000044400	XRN2	90	97.684	ENSMLUG00000001536	XRN2	100	97.684	Myotis_lucifugus
ENSRROG00000044400	XRN2	90	97.684	ENSNGAG00000018138	Xrn2	100	97.684	Nannospalax_galili
ENSRROG00000044400	XRN2	81	75.694	ENSNBRG00000008062	xrn2	97	75.694	Neolamprologus_brichardi
ENSRROG00000044400	XRN2	90	99.895	ENSNLEG00000009991	XRN2	100	99.895	Nomascus_leucogenys
ENSRROG00000044400	XRN2	60	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSRROG00000044400	XRN2	68	78.534	ENSOPRG00000001397	-	77	78.534	Ochotona_princeps
ENSRROG00000044400	XRN2	88	88.673	ENSODEG00000000860	-	99	89.105	Octodon_degus
ENSRROG00000044400	XRN2	90	97.684	ENSODEG00000010745	-	100	97.684	Octodon_degus
ENSRROG00000044400	XRN2	90	71.649	ENSONIG00000018720	xrn2	100	71.856	Oreochromis_niloticus
ENSRROG00000044400	XRN2	90	91.071	ENSOANG00000015673	XRN2	100	91.071	Ornithorhynchus_anatinus
ENSRROG00000044400	XRN2	90	98.632	ENSOCUG00000013468	XRN2	100	98.632	Oryctolagus_cuniculus
ENSRROG00000044400	XRN2	89	70.301	ENSORLG00000017213	xrn2	97	74.942	Oryzias_latipes
ENSRROG00000044400	XRN2	89	70.301	ENSORLG00020001824	xrn2	100	69.898	Oryzias_latipes_hni
ENSRROG00000044400	XRN2	89	70.093	ENSORLG00015019747	xrn2	100	69.796	Oryzias_latipes_hsok
ENSRROG00000044400	XRN2	81	73.988	ENSOMEG00000019820	xrn2	100	69.028	Oryzias_melastigma
ENSRROG00000044400	XRN2	90	97.476	ENSOGAG00000001068	XRN2	100	97.476	Otolemur_garnettii
ENSRROG00000044400	XRN2	88	96.328	ENSOARG00000004443	XRN2	100	96.328	Ovis_aries
ENSRROG00000044400	XRN2	90	99.895	ENSPPAG00000033549	XRN2	100	99.895	Pan_paniscus
ENSRROG00000044400	XRN2	90	98.105	ENSPPRG00000008732	XRN2	100	98.105	Panthera_pardus
ENSRROG00000044400	XRN2	88	98.054	ENSPTIG00000015683	XRN2	97	98.054	Panthera_tigris_altaica
ENSRROG00000044400	XRN2	90	99.895	ENSPTRG00000013308	XRN2	100	99.895	Pan_troglodytes
ENSRROG00000044400	XRN2	90	100.000	ENSPANG00000018088	XRN2	100	100.000	Papio_anubis
ENSRROG00000044400	XRN2	90	70.624	ENSPKIG00000016889	xrn2	100	70.624	Paramormyrops_kingsleyae
ENSRROG00000044400	XRN2	73	86.979	ENSPSIG00000014666	XRN2	100	86.979	Pelodiscus_sinensis
ENSRROG00000044400	XRN2	90	96.316	ENSPEMG00000000111	Xrn2	100	96.316	Peromyscus_maniculatus_bairdii
ENSRROG00000044400	XRN2	90	69.990	ENSPFOG00000004182	xrn2	99	70.545	Poecilia_formosa
ENSRROG00000044400	XRN2	81	74.419	ENSPLAG00000007351	xrn2	96	74.419	Poecilia_latipinna
ENSRROG00000044400	XRN2	85	68.335	ENSPMEG00000011798	xrn2	99	69.350	Poecilia_mexicana
ENSRROG00000044400	XRN2	81	74.302	ENSPREG00000012452	xrn2	99	72.727	Poecilia_reticulata
ENSRROG00000044400	XRN2	90	99.474	ENSPPYG00000010755	XRN2	100	99.474	Pongo_abelii
ENSRROG00000044400	XRN2	90	91.387	ENSPCAG00000011191	XRN2	100	91.387	Procavia_capensis
ENSRROG00000044400	XRN2	90	91.263	ENSPCOG00000016468	XRN2	100	91.263	Propithecus_coquereli
ENSRROG00000044400	XRN2	84	96.049	ENSPVAG00000004596	XRN2	93	96.049	Pteropus_vampyrus
ENSRROG00000044400	XRN2	81	73.642	ENSPNYG00000001765	xrn2	97	73.642	Pundamilia_nyererei
ENSRROG00000044400	XRN2	90	71.429	ENSPNAG00000010956	xrn2	99	71.429	Pygocentrus_nattereri
ENSRROG00000044400	XRN2	90	96.845	ENSRNOG00000011785	Xrn2	100	96.845	Rattus_norvegicus
ENSRROG00000044400	XRN2	78	99.878	ENSRBIG00000036193	XRN2	100	99.878	Rhinopithecus_bieti
ENSRROG00000044400	XRN2	70	48.069	YOR048C	RAT1	63	53.846	Saccharomyces_cerevisiae
ENSRROG00000044400	XRN2	90	99.158	ENSSBOG00000021014	XRN2	100	99.158	Saimiri_boliviensis_boliviensis
ENSRROG00000044400	XRN2	90	71.723	ENSSFOG00015001091	xrn2	100	71.723	Scleropages_formosus
ENSRROG00000044400	XRN2	83	72.799	ENSSMAG00000007834	xrn2	100	68.490	Scophthalmus_maximus
ENSRROG00000044400	XRN2	82	71.833	ENSSDUG00000012802	xrn2	99	72.172	Seriola_dumerili
ENSRROG00000044400	XRN2	84	73.446	ENSSLDG00000021273	xrn2	100	73.446	Seriola_lalandi_dorsalis
ENSRROG00000044400	XRN2	69	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSRROG00000044400	XRN2	88	79.528	ENSSPUG00000005485	XRN2	96	79.636	Sphenodon_punctatus
ENSRROG00000044400	XRN2	90	70.420	ENSSPAG00000016027	xrn2	99	70.420	Stegastes_partitus
ENSRROG00000044400	XRN2	90	95.789	ENSSSCG00000007109	XRN2	100	95.789	Sus_scrofa
ENSRROG00000044400	XRN2	90	81.420	ENSTGUG00000007535	XRN2	100	81.837	Taeniopygia_guttata
ENSRROG00000044400	XRN2	90	68.113	ENSTRUG00000015489	xrn2	100	68.485	Takifugu_rubripes
ENSRROG00000044400	XRN2	90	71.236	ENSTNIG00000010712	xrn2	100	71.236	Tetraodon_nigroviridis
ENSRROG00000044400	XRN2	90	97.158	ENSTBEG00000004119	XRN2	100	97.158	Tupaia_belangeri
ENSRROG00000044400	XRN2	84	97.477	ENSTTRG00000009087	XRN2	93	97.477	Tursiops_truncatus
ENSRROG00000044400	XRN2	90	98.316	ENSUAMG00000024634	XRN2	100	98.316	Ursus_americanus
ENSRROG00000044400	XRN2	88	98.054	ENSUMAG00000004012	XRN2	95	98.054	Ursus_maritimus
ENSRROG00000044400	XRN2	80	89.822	ENSVPAG00000010694	XRN2	91	89.822	Vicugna_pacos
ENSRROG00000044400	XRN2	90	98.421	ENSVVUG00000012178	XRN2	100	98.421	Vulpes_vulpes
ENSRROG00000044400	XRN2	90	74.974	ENSXETG00000023501	xrn2	100	75.078	Xenopus_tropicalis
ENSRROG00000044400	XRN2	90	68.551	ENSXMAG00000000242	xrn2	92	78.589	Xiphophorus_maculatus