EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSRROG00000044498 (Gene tree)
Gene ID
104678860
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Rhinopithecus_roxellana
Status
putative
Strand
Minus strand
Length
42547 bases
Position
chrKN298755.1:2931396-2973942
Accession
104678860
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRROP00000042806PABPPF00658.181.5e-2711
ENSRROP00000042799PABPPF00658.187.9e-2511
ENSRROP00000042807PABPPF00658.185.3e-2411
ENSRROP00000042806RRM_5PF13893.63.8e-0911
ENSRROP00000042806RRM_1PF00076.221.8e-9014
ENSRROP00000042806RRM_1PF00076.221.8e-9024
ENSRROP00000042806RRM_1PF00076.221.8e-9034
ENSRROP00000042806RRM_1PF00076.221.8e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRROT00000067316PABPC1L-203516-ENSRROP00000042807171 (aa)-A0A2K6RP49
ENSRROT00000067315PABPC1L-2022129XM_010384255ENSRROP00000042806614 (aa)XP_010382557A0A2K6RP68
ENSRROT00000067308PABPC1L-201450-ENSRROP00000042799149 (aa)-A0A2K6RP40
Gene Model
Click here to download ENSRROG00000044498's gene model file
Pathways
Pathway IDPathway NameSource
rro03013RNA transportKEGG
rro03015mRNA surveillance pathwayKEGG
rro03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000044498's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRROG00000044498PABPC1L6133.735ENSRROG00000041782ELAVL29233.735
ENSRROG00000044498PABPC1L5633.333ENSRROG00000002558HNRNPA05333.333
ENSRROG00000044498PABPC1L5235.135ENSRROG00000032588CELF16535.135
ENSRROG00000044498PABPC1L5830.409ENSRROG00000043377TIAL19030.409
ENSRROG00000044498PABPC1L5631.410ENSRROG00000030782-8831.410
ENSRROG00000044498PABPC1L6262.259ENSRROG00000020367PABPC4L9862.259
ENSRROG00000044498PABPC1L6651.568ENSRROG00000029758-8851.568
ENSRROG00000044498PABPC1L5735.294ENSRROG00000044979CELF39235.211
ENSRROG00000044498PABPC1L9967.203ENSRROG00000033355PABPC49866.667
ENSRROG00000044498PABPC1L5835.065ENSRROG00000037769ELAVL19430.693
ENSRROG00000044498PABPC1L9965.457ENSRROG00000042796-9865.457
ENSRROG00000044498PABPC1L9966.026ENSRROG00000036871PABPC39865.968
ENSRROG00000044498PABPC1L9954.486ENSRROG00000028723-10051.899
ENSRROG00000044498PABPC1L6159.551ENSRROG00000036708PABPC59659.504
ENSRROG00000044498PABPC1L6069.543ENSRROG00000017404-9969.543
ENSRROG00000044498PABPC1L9865.854ENSRROG00000032349-9765.854
ENSRROG00000044498PABPC1L6141.429ENSRROG00000044786ELAVL47841.429
ENSRROG00000044498PABPC1L9949.435ENSRROG00000044781-9652.488
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRROG00000044498PABPC1L10098.534ENSG00000101104PABPC1L10098.534Homo_sapiens
ENSRROG00000044498PABPC1L9966.720ENSAPOG00000010842pabpc1l9966.507Acanthochromis_polyacanthus
ENSRROG00000044498PABPC1L9977.969ENSAMEG00000004099PABPC1L10078.281Ailuropoda_melanoleuca
ENSRROG00000044498PABPC1L9967.628ENSACIG00000021004-9979.121Amphilophus_citrinellus
ENSRROG00000044498PABPC1L9966.509ENSAOCG00000006167-9966.509Amphiprion_ocellaris
ENSRROG00000044498PABPC1L9972.662ENSAPEG00000010558-9978.824Amphiprion_percula
ENSRROG00000044498PABPC1L9969.305ENSATEG00000007428pabpc1l9969.305Anabas_testudineus
ENSRROG00000044498PABPC1L9774.110ENSAPLG00000008415PABPC1L9874.194Anas_platyrhynchos
ENSRROG00000044498PABPC1L9974.478ENSACAG00000011841PABPC1L9874.318Anolis_carolinensis
ENSRROG00000044498PABPC1L10095.928ENSANAG00000026826PABPC1L10095.928Aotus_nancymaae
ENSRROG00000044498PABPC1L9967.732ENSACLG00000024791pabpc1l9967.732Astatotilapia_calliptera
ENSRROG00000044498PABPC1L9970.927ENSAMXG00000013552pabpc1l9970.400Astyanax_mexicanus
ENSRROG00000044498PABPC1L5995.833ENSBTAG00000055300-10095.833Bos_taurus
ENSRROG00000044498PABPC1L9974.830ENSBTAG00000050862-8177.703Bos_taurus
ENSRROG00000044498PABPC1L6777.193ENSBTAG00000016849PABPC1L8578.495Bos_taurus
ENSRROG00000044498PABPC1L10096.417ENSCJAG00000017628PABPC1L10096.417Callithrix_jacchus
ENSRROG00000044498PABPC1L6075.862ENSCJAG00000038506-10075.862Callithrix_jacchus
ENSRROG00000044498PABPC1L9974.387ENSCAFG00000009573PABPC1L10074.387Canis_familiaris
ENSRROG00000044498PABPC1L9987.541ENSCAFG00020013828PABPC1L9987.541Canis_lupus_dingo
ENSRROG00000044498PABPC1L9786.789ENSCHIG00000025759PABPC1L9186.789Capra_hircus
ENSRROG00000044498PABPC1L10087.785ENSTSYG00000006645PABPC1L10087.785Carlito_syrichta
ENSRROG00000044498PABPC1L9979.964ENSCAPG00000014519PABPC1L10079.964Cavia_aperea
ENSRROG00000044498PABPC1L10083.226ENSCPOG00000013633PABPC1L10083.226Cavia_porcellus
ENSRROG00000044498PABPC1L10095.603ENSCCAG00000023338PABPC1L10095.603Cebus_capucinus
ENSRROG00000044498PABPC1L10098.860ENSCATG00000034065PABPC1L10098.860Cercocebus_atys
ENSRROG00000044498PABPC1L10081.290ENSCLAG00000005298PABPC1L10082.581Chinchilla_lanigera
ENSRROG00000044498PABPC1L10098.534ENSCSAG00000014242PABPC1L10098.534Chlorocebus_sabaeus
ENSRROG00000044498PABPC1L5478.030ENSCPBG00000007810-8378.030Chrysemys_picta_bellii
ENSRROG00000044498PABPC1L7281.532ENSCPBG00000017755-9981.532Chrysemys_picta_bellii
ENSRROG00000044498PABPC1L10057.047ENSCPBG00000017765-7759.124Chrysemys_picta_bellii
ENSRROG00000044498PABPC1L9650.610ENSCING00000002796-9749.390Ciona_intestinalis
ENSRROG00000044498PABPC1L9757.167ENSCSAVG00000003102-10080.822Ciona_savignyi
ENSRROG00000044498PABPC1L8077.647ENSCSAVG00000004246-8979.518Ciona_savignyi
ENSRROG00000044498PABPC1L10093.740ENSCANG00000037530PABPC1L10093.740Colobus_angolensis_palliatus
ENSRROG00000044498PABPC1L9976.948ENSCGRG00001021938Pabpc1l9976.948Cricetulus_griseus_chok1gshd
ENSRROG00000044498PABPC1L9976.948ENSCGRG00000007946Pabpc1l9976.948Cricetulus_griseus_crigri
ENSRROG00000044498PABPC1L9865.563ENSCSEG00000021295pabpc1l9965.563Cynoglossus_semilaevis
ENSRROG00000044498PABPC1L9968.860ENSCVAG00000015943-8685.385Cyprinodon_variegatus
ENSRROG00000044498PABPC1L9970.144ENSDARG00000002597pabpc1l8885.385Danio_rerio
ENSRROG00000044498PABPC1L9989.233ENSDNOG00000048450PABPC1L9989.233Dasypus_novemcinctus
ENSRROG00000044498PABPC1L10085.831ENSDORG00000001067Pabpc1l9986.111Dipodomys_ordii
ENSRROG00000044498PABPC1L9690.244ENSETEG00000009969PABPC1L7390.244Echinops_telfairi
ENSRROG00000044498PABPC1L5995.238ENSEASG00005023408-10095.238Equus_asinus_asinus
ENSRROG00000044498PABPC1L5188.485ENSEASG00005023407-6788.485Equus_asinus_asinus
ENSRROG00000044498PABPC1L10075.168ENSEASG00005023406-8576.087Equus_asinus_asinus
ENSRROG00000044498PABPC1L6786.522ENSECAG00000040139-8286.522Equus_caballus
ENSRROG00000044498PABPC1L9974.830ENSECAG00000022681PABPC1L9375.000Equus_caballus
ENSRROG00000044498PABPC1L10082.736ENSEEUG00000005978PABPC1L10082.736Erinaceus_europaeus
ENSRROG00000044498PABPC1L9970.541ENSELUG00000001811pabpc1l9970.335Esox_lucius
ENSRROG00000044498PABPC1L9988.197ENSFCAG00000011692PABPC1L9988.197Felis_catus
ENSRROG00000044498PABPC1L8874.770ENSFALG00000005372PABPC1L9074.770Ficedula_albicollis
ENSRROG00000044498PABPC1L10081.626ENSFDAG00000008291PABPC1L10081.626Fukomys_damarensis
ENSRROG00000044498PABPC1L9969.775ENSFHEG00000003398pabpc1l9969.565Fundulus_heteroclitus
ENSRROG00000044498PABPC1L9968.182ENSGMOG00000004437pabpc1l9868.182Gadus_morhua
ENSRROG00000044498PABPC1L9770.790ENSGALG00000004123PABPC1L9982.974Gallus_gallus
ENSRROG00000044498PABPC1L9966.000ENSGAFG00000021057pabpc1l9965.639Gambusia_affinis
ENSRROG00000044498PABPC1L9967.464ENSGACG00000002792pabpc1l9967.305Gasterosteus_aculeatus
ENSRROG00000044498PABPC1L9975.723ENSGAGG00000000589PABPC1L9086.364Gopherus_agassizii
ENSRROG00000044498PABPC1L10098.208ENSGGOG00000004584PABPC1L10098.208Gorilla_gorilla
ENSRROG00000044498PABPC1L9967.572ENSHBUG00000006134pabpc1l9967.572Haplochromis_burtoni
ENSRROG00000044498PABPC1L10083.387ENSHGLG00000008434PABPC1L10083.387Heterocephalus_glaber_female
ENSRROG00000044498PABPC1L5980.899ENSHGLG00100019506-10080.899Heterocephalus_glaber_male
ENSRROG00000044498PABPC1L10083.387ENSHGLG00100012151PABPC1L10083.387Heterocephalus_glaber_male
ENSRROG00000044498PABPC1L9967.822ENSHCOG00000009270pabpc1l9967.617Hippocampus_comes
ENSRROG00000044498PABPC1L6062.069ENSIPUG00000006780-8562.069Ictalurus_punctatus
ENSRROG00000044498PABPC1L5961.494ENSIPUG00000006760-8861.494Ictalurus_punctatus
ENSRROG00000044498PABPC1L9970.880ENSIPUG00000012602pabpc1l9970.880Ictalurus_punctatus
ENSRROG00000044498PABPC1L10088.274ENSSTOG00000003739PABPC1L10088.274Ictidomys_tridecemlineatus
ENSRROG00000044498PABPC1L9967.818ENSJJAG00000022406Pabpc1l9963.636Jaculus_jaculus
ENSRROG00000044498PABPC1L9969.467ENSKMAG00000016847pabpc1l9969.368Kryptolebias_marmoratus
ENSRROG00000044498PABPC1L9967.035ENSLBEG00000010084pabpc1l9966.719Labrus_bergylta
ENSRROG00000044498PABPC1L9969.793ENSLACG00000005762PABPC1L9971.140Latimeria_chalumnae
ENSRROG00000044498PABPC1L9970.720ENSLOCG00000007519pabpc1l9870.673Lepisosteus_oculatus
ENSRROG00000044498PABPC1L9984.455ENSLAFG00000003553PABPC1L10084.455Loxodonta_africana
ENSRROG00000044498PABPC1L10098.697ENSMFAG00000040365PABPC1L10098.697Macaca_fascicularis
ENSRROG00000044498PABPC1L10097.315ENSMMUG00000013209-10097.315Macaca_mulatta
ENSRROG00000044498PABPC1L10095.948ENSMNEG00000032298PABPC1L10095.948Macaca_nemestrina
ENSRROG00000044498PABPC1L10098.860ENSMLEG00000043139PABPC1L10098.860Mandrillus_leucophaeus
ENSRROG00000044498PABPC1L9768.197ENSMAMG00000011854pabpc1l9768.144Mastacembelus_armatus
ENSRROG00000044498PABPC1L9967.732ENSMZEG00005023713pabpc1l9967.732Maylandia_zebra
ENSRROG00000044498PABPC1L9975.362ENSMGAG00000003674PABPC1L9875.362Meleagris_gallopavo
ENSRROG00000044498PABPC1L10085.235ENSMICG00000000974-9286.861Microcebus_murinus
ENSRROG00000044498PABPC1L9975.000ENSMOCG00000013186Pabpc1l9975.000Microtus_ochrogaster
ENSRROG00000044498PABPC1L9967.846ENSMMOG00000020574-9085.385Mola_mola
ENSRROG00000044498PABPC1L9779.500ENSMODG00000016198PABPC1L9979.333Monodelphis_domestica
ENSRROG00000044498PABPC1L9766.613ENSMALG00000021622pabpc1l10066.396Monopterus_albus
ENSRROG00000044498PABPC1L9977.124MGP_CAROLIEiJ_G0024627Pabpc1l9977.124Mus_caroli
ENSRROG00000044498PABPC1L9976.961ENSMUSG00000054582Pabpc1l9976.961Mus_musculus
ENSRROG00000044498PABPC1L9977.162MGP_PahariEiJ_G0026071Pabpc1l9977.162Mus_pahari
ENSRROG00000044498PABPC1L9977.124MGP_SPRETEiJ_G0025549Pabpc1l9977.124Mus_spretus
ENSRROG00000044498PABPC1L9985.552ENSMPUG00000017646PABPC1L9985.552Mustela_putorius_furo
ENSRROG00000044498PABPC1L9878.710ENSMLUG00000006324PABPC1L9778.710Myotis_lucifugus
ENSRROG00000044498PABPC1L9979.417ENSNGAG00000010458Pabpc1l9979.417Nannospalax_galili
ENSRROG00000044498PABPC1L9872.422ENSNBRG00000016633pabpc1l9978.161Neolamprologus_brichardi
ENSRROG00000044498PABPC1L9394.969ENSNLEG00000006653-9395.513Nomascus_leucogenys
ENSRROG00000044498PABPC1L10067.752ENSMEUG00000007905-10067.752Notamacropus_eugenii
ENSRROG00000044498PABPC1L10086.341ENSOPRG00000011846PABPC1L10086.341Ochotona_princeps
ENSRROG00000044498PABPC1L10075.896ENSODEG00000015482PABPC1L10075.896Octodon_degus
ENSRROG00000044498PABPC1L5873.750ENSODEG00000002920-9773.750Octodon_degus
ENSRROG00000044498PABPC1L9967.732ENSONIG00000017314pabpc1l9967.732Oreochromis_niloticus
ENSRROG00000044498PABPC1L8968.174ENSOANG00000015793-10068.174Ornithorhynchus_anatinus
ENSRROG00000044498PABPC1L9980.556ENSOCUG00000003005PABPC1L10080.556Oryctolagus_cuniculus
ENSRROG00000044498PABPC1L9771.596ENSORLG00000010322pabpc1l9976.250Oryzias_latipes
ENSRROG00000044498PABPC1L9771.596ENSORLG00020021193pabpc1l9976.250Oryzias_latipes_hni
ENSRROG00000044498PABPC1L9771.596ENSORLG00015017018pabpc1l9975.000Oryzias_latipes_hsok
ENSRROG00000044498PABPC1L9964.286ENSOMEG00000010789pabpc1l9964.079Oryzias_melastigma
ENSRROG00000044498PABPC1L9987.340ENSOGAG00000032999PABPC1L10087.340Otolemur_garnettii
ENSRROG00000044498PABPC1L9987.213ENSOARG00000004578PABPC1L9987.213Ovis_aries
ENSRROG00000044498PABPC1L10098.371ENSPPAG00000039677PABPC1L10098.371Pan_paniscus
ENSRROG00000044498PABPC1L6381.173ENSPPRG00000019327-9881.173Panthera_pardus
ENSRROG00000044498PABPC1L9978.378ENSPPRG00000020242-9279.412Panthera_pardus
ENSRROG00000044498PABPC1L9888.245ENSPTIG00000006524PABPC1L9988.245Panthera_tigris_altaica
ENSRROG00000044498PABPC1L6398.457ENSPTRG00000013531PABPC1L9998.457Pan_troglodytes
ENSRROG00000044498PABPC1L10097.076ENSPTRG00000044192-10097.619Pan_troglodytes
ENSRROG00000044498PABPC1L10098.860ENSPANG00000018788PABPC1L10098.860Papio_anubis
ENSRROG00000044498PABPC1L5380.916ENSPKIG00000016810-9380.916Paramormyrops_kingsleyae
ENSRROG00000044498PABPC1L9971.268ENSPKIG00000007322pabpc1l9970.853Paramormyrops_kingsleyae
ENSRROG00000044498PABPC1L6883.213ENSPSIG00000013289PABPC1L9983.213Pelodiscus_sinensis
ENSRROG00000044498PABPC1L6178.140ENSPMGG00000023117pabpc1l9285.606Periophthalmus_magnuspinnatus
ENSRROG00000044498PABPC1L7267.337ENSPMGG00000023121-9367.172Periophthalmus_magnuspinnatus
ENSRROG00000044498PABPC1L9976.797ENSPEMG00000020671Pabpc1l9976.797Peromyscus_maniculatus_bairdii
ENSRROG00000044498PABPC1L9969.530ENSPFOG00000013241pabpc1l9968.882Poecilia_formosa
ENSRROG00000044498PABPC1L5386.154ENSPLAG00000023686-9286.154Poecilia_latipinna
ENSRROG00000044498PABPC1L9969.094ENSPLAG00000017490-9969.044Poecilia_latipinna
ENSRROG00000044498PABPC1L5386.154ENSPMEG00000009185-8886.154Poecilia_mexicana
ENSRROG00000044498PABPC1L9968.371ENSPMEG00000007677pabpc1l9968.000Poecilia_mexicana
ENSRROG00000044498PABPC1L5280.519ENSPREG00000015197-7378.889Poecilia_reticulata
ENSRROG00000044498PABPC1L6776.513ENSPREG00000015886pabpc1l9976.513Poecilia_reticulata
ENSRROG00000044498PABPC1L10098.371ENSPPYG00000011042PABPC1L10098.371Pongo_abelii
ENSRROG00000044498PABPC1L6293.750ENSPCAG00000011787-7593.750Procavia_capensis
ENSRROG00000044498PABPC1L9989.786ENSPCOG00000020630PABPC1L9989.786Propithecus_coquereli
ENSRROG00000044498PABPC1L9985.082ENSPVAG00000012663PABPC1L9985.082Pteropus_vampyrus
ENSRROG00000044498PABPC1L9872.422ENSPNYG00000004101pabpc1l9978.161Pundamilia_nyererei
ENSRROG00000044498PABPC1L9964.160ENSPNAG00000021248pabpc1l9963.782Pygocentrus_nattereri
ENSRROG00000044498PABPC1L9976.985ENSRNOG00000012750Pabpc1l10076.985Rattus_norvegicus
ENSRROG00000044498PABPC1L10099.511ENSRBIG00000035381PABPC1L10099.511Rhinopithecus_bieti
ENSRROG00000044498PABPC1L9973.649ENSSBOG00000020828-9276.282Saimiri_boliviensis_boliviensis
ENSRROG00000044498PABPC1L10095.765ENSSBOG00000009532-10095.765Saimiri_boliviensis_boliviensis
ENSRROG00000044498PABPC1L9773.824ENSSHAG00000011446PABPC1L10073.824Sarcophilus_harrisii
ENSRROG00000044498PABPC1L9971.795ENSSFOG00015017304pabpc1l9971.429Scleropages_formosus
ENSRROG00000044498PABPC1L9968.045ENSSMAG00000010516pabpc1l9886.822Scophthalmus_maximus
ENSRROG00000044498PABPC1L9968.146ENSSDUG00000014743pabpc1l9968.146Seriola_dumerili
ENSRROG00000044498PABPC1L9873.381ENSSLDG00000006981pabpc1l9876.256Seriola_lalandi_dorsalis
ENSRROG00000044498PABPC1L9973.836ENSSPUG00000004233PABPC1L9873.836Sphenodon_punctatus
ENSRROG00000044498PABPC1L9965.568ENSSPAG00000017137pabpc1l9964.415Stegastes_partitus
ENSRROG00000044498PABPC1L9986.513ENSSSCG00000007382PABPC1L9986.513Sus_scrofa
ENSRROG00000044498PABPC1L9974.371ENSTGUG00000005114PABPC1L9974.371Taeniopygia_guttata
ENSRROG00000044498PABPC1L9767.045ENSTRUG00000011085pabpc1l9767.045Takifugu_rubripes
ENSRROG00000044498PABPC1L9965.974ENSTNIG00000017903pabpc1l9865.974Tetraodon_nigroviridis
ENSRROG00000044498PABPC1L9493.493ENSTBEG00000002851PABPC1L8093.493Tupaia_belangeri
ENSRROG00000044498PABPC1L9485.938ENSTTRG00000007618PABPC1L10085.980Tursiops_truncatus
ENSRROG00000044498PABPC1L9985.502ENSUAMG00000017682PABPC1L9985.502Ursus_americanus
ENSRROG00000044498PABPC1L6789.973ENSUMAG00000025436PABPC1L9489.973Ursus_maritimus
ENSRROG00000044498PABPC1L9892.095ENSVVUG00000018939PABPC1L9992.095Vulpes_vulpes
ENSRROG00000044498PABPC1L9969.872ENSXETG00000022831pabpc1l9869.887Xenopus_tropicalis
ENSRROG00000044498PABPC1L9772.235ENSXCOG00000005459pabpc1l9981.560Xiphophorus_couchianus
ENSRROG00000044498PABPC1L9969.417ENSXMAG00000017135pabpc1l9969.044Xiphophorus_maculatus

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