EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000044861 (Gene tree)
Gene ID: 104671672
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 19658 bases
Position: chrKN297323.1:650539-670196
Accession: 104671672
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000043832	CPSF_A	PF03178.15	6e-92	1	1
ENSRROP00000043787	CPSF_A	PF03178.15	1.1e-91	1	1
ENSRROP00000043801	CPSF_A	PF03178.15	1.1e-91	1	1
ENSRROP00000043827	CPSF_A	PF03178.15	1.6e-68	1	2
ENSRROP00000043827	CPSF_A	PF03178.15	1.6e-68	2	2
ENSRROP00000043820	CPSF_A	PF03178.15	3.1e-68	1	1
ENSRROP00000043837	CPSF_A	PF03178.15	2.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000068298	CPSF1-201	7857	-	ENSRROP00000043787	1442 (aa)	-	A0A2K6RRX9
ENSRROT00000068331	CPSF1-203	4248	-	ENSRROP00000043820	1415 (aa)	-	A0A2K6RS13
ENSRROT00000068312	CPSF1-202	7741	XM_010375222	ENSRROP00000043801	1442 (aa)	XP_010373524	A0A2K6RRX9
ENSRROT00000068338	CPSF1-204	4161	-	ENSRROP00000043827	1386 (aa)	-	A0A2K6RS21
ENSRROT00000068348	CPSF1-207	615	-	ENSRROP00000043837	204 (aa)	-	A0A2K6RS31
ENSRROT00000068345	CPSF1-206	447	-	ENSRROP00000043834	148 (aa)	-	A0A2K6RS19
ENSRROT00000068343	CPSF1-205	3333	-	ENSRROP00000043832	1110 (aa)	-	A0A2K6RS26

Gene Model

Click here to download ENSRROG00000044861's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000044861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000044861	CPSF1	100	99.099	ENSG00000071894	CPSF1	100	99.099	Homo_sapiens
ENSRROG00000044861	CPSF1	100	81.019	ENSAPOG00000019621	cpsf1	100	78.108	Acanthochromis_polyacanthus
ENSRROG00000044861	CPSF1	97	94.711	ENSAMEG00000005557	CPSF1	100	94.711	Ailuropoda_melanoleuca
ENSRROG00000044861	CPSF1	100	80.093	ENSACIG00000006112	cpsf1	100	77.993	Amphilophus_citrinellus
ENSRROG00000044861	CPSF1	100	81.019	ENSAOCG00000007120	cpsf1	100	79.241	Amphiprion_ocellaris
ENSRROG00000044861	CPSF1	100	81.019	ENSAPEG00000005755	cpsf1	100	79.531	Amphiprion_percula
ENSRROG00000044861	CPSF1	100	80.556	ENSATEG00000011097	cpsf1	100	77.950	Anabas_testudineus
ENSRROG00000044861	CPSF1	89	88.690	ENSACAG00000009655	CPSF1	100	81.622	Anolis_carolinensis
ENSRROG00000044861	CPSF1	100	98.752	ENSANAG00000036514	CPSF1	100	98.752	Aotus_nancymaae
ENSRROG00000044861	CPSF1	100	79.630	ENSACLG00000012231	cpsf1	99	78.677	Astatotilapia_calliptera
ENSRROG00000044861	CPSF1	100	80.093	ENSAMXG00000008485	cpsf1	100	74.947	Astyanax_mexicanus
ENSRROG00000044861	CPSF1	98	96.450	ENSBTAG00000008355	CPSF1	100	94.672	Bos_taurus
ENSRROG00000044861	CPSF1	99	33.333	WBGene00022301	cpsf-1	100	40.282	Caenorhabditis_elegans
ENSRROG00000044861	CPSF1	100	98.544	ENSCJAG00000021421	CPSF1	100	98.544	Callithrix_jacchus
ENSRROG00000044861	CPSF1	97	96.140	ENSCAFG00000001600	CPSF1	100	96.390	Canis_familiaris
ENSRROG00000044861	CPSF1	100	96.332	ENSCAFG00020020821	CPSF1	100	96.332	Canis_lupus_dingo
ENSRROG00000044861	CPSF1	98	95.858	ENSCHIG00000015833	CPSF1	100	90.765	Capra_hircus
ENSRROG00000044861	CPSF1	100	97.642	ENSTSYG00000028560	CPSF1	99	98.830	Carlito_syrichta
ENSRROG00000044861	CPSF1	97	94.982	ENSCAPG00000014921	CPSF1	99	94.982	Cavia_aperea
ENSRROG00000044861	CPSF1	100	94.733	ENSCPOG00000011448	CPSF1	100	94.733	Cavia_porcellus
ENSRROG00000044861	CPSF1	100	98.752	ENSCCAG00000037658	CPSF1	100	98.752	Cebus_capucinus
ENSRROG00000044861	CPSF1	100	99.653	ENSCATG00000037234	CPSF1	100	99.653	Cercocebus_atys
ENSRROG00000044861	CPSF1	100	96.533	ENSCLAG00000012166	CPSF1	100	96.533	Chinchilla_lanigera
ENSRROG00000044861	CPSF1	100	99.584	ENSCSAG00000008502	CPSF1	100	99.584	Chlorocebus_sabaeus
ENSRROG00000044861	CPSF1	99	87.544	ENSCPBG00000018910	CPSF1	96	87.544	Chrysemys_picta_bellii
ENSRROG00000044861	CPSF1	93	54.819	ENSCING00000000514	-	100	48.350	Ciona_intestinalis
ENSRROG00000044861	CPSF1	98	51.479	ENSCSAVG00000002293	-	98	49.765	Ciona_savignyi
ENSRROG00000044861	CPSF1	100	99.510	ENSCANG00000032760	CPSF1	100	99.510	Colobus_angolensis_palliatus
ENSRROG00000044861	CPSF1	100	96.325	ENSCGRG00001016344	Cpsf1	100	96.325	Cricetulus_griseus_chok1gshd
ENSRROG00000044861	CPSF1	100	97.612	ENSCGRG00000003118	Cpsf1	100	94.313	Cricetulus_griseus_crigri
ENSRROG00000044861	CPSF1	100	77.578	ENSCSEG00000013464	cpsf1	100	77.439	Cynoglossus_semilaevis
ENSRROG00000044861	CPSF1	100	81.463	ENSCVAG00000014059	cpsf1	100	81.463	Cyprinodon_variegatus
ENSRROG00000044861	CPSF1	56	30.065	ENSCVAG00000019531	ddb1	58	30.065	Cyprinodon_variegatus
ENSRROG00000044861	CPSF1	99	81.250	ENSDARG00000034178	cpsf1	100	79.959	Danio_rerio
ENSRROG00000044861	CPSF1	59	95.652	ENSDNOG00000043654	CPSF1	94	95.652	Dasypus_novemcinctus
ENSRROG00000044861	CPSF1	97	95.842	ENSDORG00000006278	Cpsf1	99	95.842	Dipodomys_ordii
ENSRROG00000044861	CPSF1	98	54.701	FBgn0024698	Cpsf160	100	45.393	Drosophila_melanogaster
ENSRROG00000044861	CPSF1	83	97.315	ENSETEG00000006022	CPSF1	83	97.315	Echinops_telfairi
ENSRROG00000044861	CPSF1	90	62.755	ENSEBUG00000006844	-	97	74.541	Eptatretus_burgeri
ENSRROG00000044861	CPSF1	100	96.886	ENSEASG00005010774	CPSF1	100	96.886	Equus_asinus_asinus
ENSRROG00000044861	CPSF1	100	96.886	ENSECAG00000022209	CPSF1	100	96.886	Equus_caballus
ENSRROG00000044861	CPSF1	100	94.533	ENSEEUG00000000471	CPSF1	100	94.533	Erinaceus_europaeus
ENSRROG00000044861	CPSF1	100	80.093	ENSELUG00000012271	cpsf1	100	78.699	Esox_lucius
ENSRROG00000044861	CPSF1	100	96.463	ENSFDAG00000016060	CPSF1	100	96.463	Fukomys_damarensis
ENSRROG00000044861	CPSF1	99	78.571	ENSFHEG00000016801	cpsf1	100	76.722	Fundulus_heteroclitus
ENSRROG00000044861	CPSF1	100	79.167	ENSGMOG00000000796	cpsf1	100	78.000	Gadus_morhua
ENSRROG00000044861	CPSF1	56	30.065	ENSGAFG00000013142	ddb1	57	30.065	Gambusia_affinis
ENSRROG00000044861	CPSF1	95	85.714	ENSGAFG00000018890	cpsf1	100	85.714	Gambusia_affinis
ENSRROG00000044861	CPSF1	100	79.167	ENSGACG00000008703	cpsf1	100	78.473	Gasterosteus_aculeatus
ENSRROG00000044861	CPSF1	99	88.657	ENSGAGG00000004276	CPSF1	98	87.500	Gopherus_agassizii
ENSRROG00000044861	CPSF1	100	62.745	ENSGGOG00000040487	-	100	70.833	Gorilla_gorilla
ENSRROG00000044861	CPSF1	100	99.237	ENSGGOG00000016185	CPSF1	100	99.237	Gorilla_gorilla
ENSRROG00000044861	CPSF1	100	79.654	ENSHBUG00000018900	cpsf1	100	79.377	Haplochromis_burtoni
ENSRROG00000044861	CPSF1	100	96.325	ENSHGLG00000016139	CPSF1	100	96.325	Heterocephalus_glaber_female
ENSRROG00000044861	CPSF1	100	96.255	ENSHGLG00100009750	CPSF1	100	96.255	Heterocephalus_glaber_male
ENSRROG00000044861	CPSF1	100	78.241	ENSHCOG00000018509	cpsf1	100	76.798	Hippocampus_comes
ENSRROG00000044861	CPSF1	100	80.556	ENSIPUG00000011259	cpsf1	100	76.564	Ictalurus_punctatus
ENSRROG00000044861	CPSF1	97	96.429	ENSSTOG00000009957	CPSF1	99	96.429	Ictidomys_tridecemlineatus
ENSRROG00000044861	CPSF1	100	96.255	ENSJJAG00000023002	Cpsf1	100	96.255	Jaculus_jaculus
ENSRROG00000044861	CPSF1	56	30.065	ENSKMAG00000002315	ddb1	58	30.065	Kryptolebias_marmoratus
ENSRROG00000044861	CPSF1	91	85.893	ENSKMAG00000001940	cpsf1	99	85.893	Kryptolebias_marmoratus
ENSRROG00000044861	CPSF1	100	79.167	ENSLBEG00000003601	cpsf1	100	77.725	Labrus_bergylta
ENSRROG00000044861	CPSF1	100	82.407	ENSLACG00000000233	CPSF1	92	81.490	Latimeria_chalumnae
ENSRROG00000044861	CPSF1	100	82.110	ENSLOCG00000008484	cpsf1	100	78.330	Lepisosteus_oculatus
ENSRROG00000044861	CPSF1	97	95.279	ENSLAFG00000022601	CPSF1	100	95.279	Loxodonta_africana
ENSRROG00000044861	CPSF1	100	99.653	ENSMFAG00000037013	CPSF1	100	99.653	Macaca_fascicularis
ENSRROG00000044861	CPSF1	100	99.723	ENSMMUG00000007380	CPSF1	100	99.723	Macaca_mulatta
ENSRROG00000044861	CPSF1	100	99.510	ENSMNEG00000043564	CPSF1	100	99.641	Macaca_nemestrina
ENSRROG00000044861	CPSF1	100	99.653	ENSMLEG00000043010	CPSF1	100	99.653	Mandrillus_leucophaeus
ENSRROG00000044861	CPSF1	100	80.556	ENSMAMG00000003803	cpsf1	100	78.311	Mastacembelus_armatus
ENSRROG00000044861	CPSF1	100	79.630	ENSMZEG00005001168	cpsf1	100	77.232	Maylandia_zebra
ENSRROG00000044861	CPSF1	100	96.186	ENSMAUG00000003601	Cpsf1	100	96.186	Mesocricetus_auratus
ENSRROG00000044861	CPSF1	100	97.295	ENSMICG00000015767	CPSF1	100	97.295	Microcebus_murinus
ENSRROG00000044861	CPSF1	100	96.394	ENSMOCG00000022758	Cpsf1	100	96.394	Microtus_ochrogaster
ENSRROG00000044861	CPSF1	100	78.976	ENSMMOG00000021245	cpsf1	100	78.769	Mola_mola
ENSRROG00000044861	CPSF1	100	92.897	ENSMODG00000010755	CPSF1	100	92.897	Monodelphis_domestica
ENSRROG00000044861	CPSF1	100	79.630	ENSMALG00000020545	cpsf1	100	77.673	Monopterus_albus
ENSRROG00000044861	CPSF1	100	96.533	MGP_CAROLIEiJ_G0019936	Cpsf1	100	96.533	Mus_caroli
ENSRROG00000044861	CPSF1	100	96.463	ENSMUSG00000034022	Cpsf1	100	96.463	Mus_musculus
ENSRROG00000044861	CPSF1	100	96.463	MGP_PahariEiJ_G0019946	Cpsf1	100	96.463	Mus_pahari
ENSRROG00000044861	CPSF1	100	96.463	MGP_SPRETEiJ_G0020839	Cpsf1	100	96.463	Mus_spretus
ENSRROG00000044861	CPSF1	94	95.556	ENSMPUG00000006419	CPSF1	93	95.556	Mustela_putorius_furo
ENSRROG00000044861	CPSF1	78	97.484	ENSMLUG00000000667	-	100	96.667	Myotis_lucifugus
ENSRROG00000044861	CPSF1	100	96.255	ENSNGAG00000022460	Cpsf1	100	96.255	Nannospalax_galili
ENSRROG00000044861	CPSF1	100	79.630	ENSNBRG00000000813	cpsf1	100	75.000	Neolamprologus_brichardi
ENSRROG00000044861	CPSF1	100	98.529	ENSNLEG00000010633	-	100	98.529	Nomascus_leucogenys
ENSRROG00000044861	CPSF1	85	96.512	ENSMEUG00000014922	CPSF1	85	96.512	Notamacropus_eugenii
ENSRROG00000044861	CPSF1	61	96.939	ENSOPRG00000004693	-	71	96.939	Ochotona_princeps
ENSRROG00000044861	CPSF1	100	96.602	ENSODEG00000013995	CPSF1	100	96.602	Octodon_degus
ENSRROG00000044861	CPSF1	100	79.931	ENSONIG00000007676	cpsf1	100	79.654	Oreochromis_niloticus
ENSRROG00000044861	CPSF1	60	89.583	ENSOANG00000010716	CPSF1	88	91.429	Ornithorhynchus_anatinus
ENSRROG00000044861	CPSF1	100	78.241	ENSORLG00000013544	cpsf1	92	87.243	Oryzias_latipes
ENSRROG00000044861	CPSF1	100	78.241	ENSORLG00020021693	cpsf1	92	87.243	Oryzias_latipes_hni
ENSRROG00000044861	CPSF1	100	78.241	ENSORLG00015009979	cpsf1	100	77.430	Oryzias_latipes_hsok
ENSRROG00000044861	CPSF1	100	78.241	ENSOMEG00000011849	cpsf1	100	77.536	Oryzias_melastigma
ENSRROG00000044861	CPSF1	100	97.365	ENSOGAG00000000315	CPSF1	100	97.365	Otolemur_garnettii
ENSRROG00000044861	CPSF1	53	84.462	ENSOARG00000013594	-	89	90.476	Ovis_aries
ENSRROG00000044861	CPSF1	100	99.307	ENSPPAG00000019280	CPSF1	100	99.307	Pan_paniscus
ENSRROG00000044861	CPSF1	100	61.765	ENSPTRG00000052516	-	100	69.444	Pan_troglodytes
ENSRROG00000044861	CPSF1	100	99.020	ENSPTRG00000051253	-	100	99.020	Pan_troglodytes
ENSRROG00000044861	CPSF1	100	99.307	ENSPTRG00000049288	-	100	99.307	Pan_troglodytes
ENSRROG00000044861	CPSF1	100	99.020	ENSPANG00000015005	CPSF1	100	99.641	Papio_anubis
ENSRROG00000044861	CPSF1	100	81.944	ENSPKIG00000002582	cpsf1	100	80.819	Paramormyrops_kingsleyae
ENSRROG00000044861	CPSF1	100	76.389	ENSPMGG00000022177	-	100	84.259	Periophthalmus_magnuspinnatus
ENSRROG00000044861	CPSF1	100	92.828	ENSPCIG00000009035	CPSF1	100	92.828	Phascolarctos_cinereus
ENSRROG00000044861	CPSF1	100	76.852	ENSPFOG00000012870	cpsf1	100	76.319	Poecilia_formosa
ENSRROG00000044861	CPSF1	64	30.827	ENSPLAG00000017227	ddb1	57	30.065	Poecilia_latipinna
ENSRROG00000044861	CPSF1	64	30.827	ENSPMEG00000011398	ddb1	57	30.065	Poecilia_mexicana
ENSRROG00000044861	CPSF1	100	76.471	ENSPREG00000016307	cpsf1	100	76.268	Poecilia_reticulata
ENSRROG00000044861	CPSF1	56	30.065	ENSPREG00000004440	ddb1	59	30.065	Poecilia_reticulata
ENSRROG00000044861	CPSF1	93	99.636	ENSPPYG00000018973	CPSF1	100	90.846	Pongo_abelii
ENSRROG00000044861	CPSF1	91	94.886	ENSPCAG00000011541	CPSF1	94	94.886	Procavia_capensis
ENSRROG00000044861	CPSF1	98	98.209	ENSPCOG00000020001	CPSF1	100	94.175	Propithecus_coquereli
ENSRROG00000044861	CPSF1	91	98.571	ENSPVAG00000006761	CPSF1	91	98.571	Pteropus_vampyrus
ENSRROG00000044861	CPSF1	100	79.630	ENSPNYG00000004906	cpsf1	100	78.347	Pundamilia_nyererei
ENSRROG00000044861	CPSF1	99	79.464	ENSPNAG00000024395	cpsf1	100	75.276	Pygocentrus_nattereri
ENSRROG00000044861	CPSF1	100	96.533	ENSRNOG00000030705	Cpsf1	100	96.533	Rattus_norvegicus
ENSRROG00000044861	CPSF1	100	100.000	ENSRBIG00000044907	CPSF1	100	100.000	Rhinopithecus_bieti
ENSRROG00000044861	CPSF1	97	98.565	ENSSBOG00000027177	CPSF1	100	98.565	Saimiri_boliviensis_boliviensis
ENSRROG00000044861	CPSF1	100	92.552	ENSSHAG00000006500	CPSF1	100	92.552	Sarcophilus_harrisii
ENSRROG00000044861	CPSF1	100	82.407	ENSSFOG00015004606	cpsf1	100	81.236	Scleropages_formosus
ENSRROG00000044861	CPSF1	100	81.019	ENSSMAG00000020547	cpsf1	100	77.943	Scophthalmus_maximus
ENSRROG00000044861	CPSF1	100	80.556	ENSSDUG00000001100	cpsf1	100	79.198	Seriola_dumerili
ENSRROG00000044861	CPSF1	100	80.556	ENSSLDG00000003619	cpsf1	100	79.253	Seriola_lalandi_dorsalis
ENSRROG00000044861	CPSF1	89	100.000	ENSSARG00000003643	CPSF1	92	100.000	Sorex_araneus
ENSRROG00000044861	CPSF1	100	88.725	ENSSPUG00000014396	CPSF1	100	88.725	Sphenodon_punctatus
ENSRROG00000044861	CPSF1	100	80.556	ENSSPAG00000005349	cpsf1	100	78.161	Stegastes_partitus
ENSRROG00000044861	CPSF1	100	95.779	ENSSSCG00000005906	CPSF1	100	95.779	Sus_scrofa
ENSRROG00000044861	CPSF1	100	77.315	ENSTRUG00000013134	cpsf1	99	77.692	Takifugu_rubripes
ENSRROG00000044861	CPSF1	100	78.763	ENSTNIG00000014027	cpsf1	100	78.557	Tetraodon_nigroviridis
ENSRROG00000044861	CPSF1	79	89.138	ENSTBEG00000001756	CPSF1	91	89.138	Tupaia_belangeri
ENSRROG00000044861	CPSF1	100	88.889	ENSTTRG00000001937	CPSF1	90	96.546	Tursiops_truncatus
ENSRROG00000044861	CPSF1	97	96.426	ENSUAMG00000006476	CPSF1	98	96.426	Ursus_americanus
ENSRROG00000044861	CPSF1	67	54.967	ENSVPAG00000000157	-	50	93.991	Vicugna_pacos
ENSRROG00000044861	CPSF1	100	93.627	ENSVVUG00000005940	-	100	93.627	Vulpes_vulpes
ENSRROG00000044861	CPSF1	100	77.524	ENSXCOG00000003608	cpsf1	100	77.317	Xiphophorus_couchianus
ENSRROG00000044861	CPSF1	100	77.003	ENSXMAG00000005798	cpsf1	100	77.003	Xiphophorus_maculatus
ENSRROG00000044861	CPSF1	56	30.065	ENSXMAG00000000022	ddb1	57	30.065	Xiphophorus_maculatus