EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSRROG00000044908 (Gene tree)
Gene ID: 104659520
Gene Symbol: SF3A1
Alias: PRPF21|Prp21|SAP114|SF3a120
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Minus strand
Length: 23948 bases
Position: chrKN294842.1:1789834-1813781
Accession: 104659520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000043803	PRP21_like_P	PF12230.8	1.7e-51	1	1
ENSRROP00000043792	PRP21_like_P	PF12230.8	2.1e-51	1	1
ENSRROP00000043803	Surp	PF01805.20	8.7e-46	1	2
ENSRROP00000043803	Surp	PF01805.20	8.7e-46	2	2
ENSRROP00000043792	Surp	PF01805.20	1.1e-45	1	2
ENSRROP00000043792	Surp	PF01805.20	1.1e-45	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000068303	SF3A1-201	2382	XM_010359576	ENSRROP00000043792	793 (aa)	XP_010357878	A0A2K6RRY5
ENSRROT00000068314	SF3A1-202	2533	-	ENSRROP00000043803	727 (aa)	-	A0A2K6RRZ6

Gene Model

Click here to download ENSRROG00000044908's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000044908's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000044908	SF3A1	100	99.622	ENSG00000099995	SF3A1	100	99.622	Homo_sapiens
ENSRROG00000044908	SF3A1	100	83.145	ENSAPOG00000020465	sf3a1	99	84.783	Acanthochromis_polyacanthus
ENSRROG00000044908	SF3A1	100	98.239	ENSAMEG00000007737	SF3A1	100	98.239	Ailuropoda_melanoleuca
ENSRROG00000044908	SF3A1	100	84.528	ENSACIG00000020672	sf3a1	98	85.938	Amphilophus_citrinellus
ENSRROG00000044908	SF3A1	100	82.875	ENSAOCG00000003060	sf3a1	99	84.783	Amphiprion_ocellaris
ENSRROG00000044908	SF3A1	100	83.000	ENSAPEG00000010735	sf3a1	99	84.910	Amphiprion_percula
ENSRROG00000044908	SF3A1	97	85.956	ENSATEG00000021201	sf3a1	97	85.142	Anabas_testudineus
ENSRROG00000044908	SF3A1	95	94.188	ENSAPLG00000009057	SF3A1	99	93.419	Anas_platyrhynchos
ENSRROG00000044908	SF3A1	100	85.591	ENSACAG00000009415	SF3A1	100	86.823	Anolis_carolinensis
ENSRROG00000044908	SF3A1	100	99.369	ENSANAG00000032045	SF3A1	100	99.369	Aotus_nancymaae
ENSRROG00000044908	SF3A1	100	84.383	ENSACLG00000012622	sf3a1	98	86.180	Astatotilapia_calliptera
ENSRROG00000044908	SF3A1	99	83.439	ENSAMXG00000005382	sf3a1	99	84.319	Astyanax_mexicanus
ENSRROG00000044908	SF3A1	100	98.991	ENSBTAG00000003390	SF3A1	100	98.991	Bos_taurus
ENSRROG00000044908	SF3A1	84	43.088	WBGene00004188	prp-21	94	43.321	Caenorhabditis_elegans
ENSRROG00000044908	SF3A1	100	99.496	ENSCJAG00000010370	SF3A1	100	99.496	Callithrix_jacchus
ENSRROG00000044908	SF3A1	100	98.739	ENSCAFG00000012559	SF3A1	100	98.739	Canis_familiaris
ENSRROG00000044908	SF3A1	100	98.739	ENSCAFG00020000838	SF3A1	100	98.739	Canis_lupus_dingo
ENSRROG00000044908	SF3A1	100	98.865	ENSCHIG00000018642	SF3A1	100	98.865	Capra_hircus
ENSRROG00000044908	SF3A1	100	98.991	ENSTSYG00000004739	SF3A1	100	98.991	Carlito_syrichta
ENSRROG00000044908	SF3A1	93	83.235	ENSCAPG00000015414	SF3A1	98	81.175	Cavia_aperea
ENSRROG00000044908	SF3A1	100	98.865	ENSCPOG00000014589	SF3A1	100	98.865	Cavia_porcellus
ENSRROG00000044908	SF3A1	100	99.369	ENSCCAG00000032006	SF3A1	100	99.369	Cebus_capucinus
ENSRROG00000044908	SF3A1	100	99.748	ENSCATG00000029241	SF3A1	100	99.748	Cercocebus_atys
ENSRROG00000044908	SF3A1	100	98.739	ENSCLAG00000006508	SF3A1	100	98.739	Chinchilla_lanigera
ENSRROG00000044908	SF3A1	100	99.874	ENSCSAG00000009470	SF3A1	100	99.874	Chlorocebus_sabaeus
ENSRROG00000044908	SF3A1	61	100.000	ENSCHOG00000005201	SF3A1	69	100.000	Choloepus_hoffmanni
ENSRROG00000044908	SF3A1	100	91.058	ENSCPBG00000007595	SF3A1	100	91.184	Chrysemys_picta_bellii
ENSRROG00000044908	SF3A1	94	52.513	ENSCING00000008526	-	66	58.238	Ciona_intestinalis
ENSRROG00000044908	SF3A1	96	51.742	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSRROG00000044908	SF3A1	100	99.874	ENSCANG00000033564	SF3A1	100	99.874	Colobus_angolensis_palliatus
ENSRROG00000044908	SF3A1	100	98.361	ENSCGRG00001008933	Sf3a1	100	98.361	Cricetulus_griseus_chok1gshd
ENSRROG00000044908	SF3A1	100	98.361	ENSCGRG00000006127	Sf3a1	100	98.361	Cricetulus_griseus_crigri
ENSRROG00000044908	SF3A1	100	81.784	ENSCSEG00000010792	sf3a1	99	82.179	Cynoglossus_semilaevis
ENSRROG00000044908	SF3A1	100	83.019	ENSCVAG00000004560	sf3a1	98	84.245	Cyprinodon_variegatus
ENSRROG00000044908	SF3A1	100	82.538	ENSDARG00000041887	sf3a1	97	84.876	Danio_rerio
ENSRROG00000044908	SF3A1	100	98.616	ENSDNOG00000010629	SF3A1	100	98.616	Dasypus_novemcinctus
ENSRROG00000044908	SF3A1	100	98.991	ENSDORG00000005613	Sf3a1	100	98.991	Dipodomys_ordii
ENSRROG00000044908	SF3A1	83	60.563	FBgn0266917	Sf3a1	85	60.000	Drosophila_melanogaster
ENSRROG00000044908	SF3A1	97	95.869	ENSETEG00000017194	SF3A1	100	95.869	Echinops_telfairi
ENSRROG00000044908	SF3A1	98	65.981	ENSEBUG00000001285	sf3a1	96	66.914	Eptatretus_burgeri
ENSRROG00000044908	SF3A1	100	99.117	ENSEASG00005010254	SF3A1	100	99.117	Equus_asinus_asinus
ENSRROG00000044908	SF3A1	100	99.117	ENSECAG00000023962	SF3A1	100	99.117	Equus_caballus
ENSRROG00000044908	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSRROG00000044908	SF3A1	100	82.331	ENSELUG00000022578	sf3a1	98	82.692	Esox_lucius
ENSRROG00000044908	SF3A1	100	98.865	ENSFCAG00000011932	SF3A1	100	98.865	Felis_catus
ENSRROG00000044908	SF3A1	95	93.254	ENSFALG00000006944	SF3A1	100	91.940	Ficedula_albicollis
ENSRROG00000044908	SF3A1	100	99.117	ENSFDAG00000009560	SF3A1	100	99.117	Fukomys_damarensis
ENSRROG00000044908	SF3A1	100	84.277	ENSFHEG00000010866	sf3a1	98	85.547	Fundulus_heteroclitus
ENSRROG00000044908	SF3A1	100	81.234	ENSGMOG00000016024	sf3a1	99	80.485	Gadus_morhua
ENSRROG00000044908	SF3A1	95	94.180	ENSGALG00000007937	SF3A1	100	92.443	Gallus_gallus
ENSRROG00000044908	SF3A1	100	83.145	ENSGAFG00000009111	sf3a1	99	83.397	Gambusia_affinis
ENSRROG00000044908	SF3A1	100	82.620	ENSGACG00000011893	sf3a1	97	83.639	Gasterosteus_aculeatus
ENSRROG00000044908	SF3A1	97	90.612	ENSGAGG00000000762	SF3A1	99	91.064	Gopherus_agassizii
ENSRROG00000044908	SF3A1	100	99.622	ENSGGOG00000012631	SF3A1	100	99.622	Gorilla_gorilla
ENSRROG00000044908	SF3A1	100	84.383	ENSHBUG00000015795	sf3a1	98	86.180	Haplochromis_burtoni
ENSRROG00000044908	SF3A1	100	99.117	ENSHGLG00000007907	SF3A1	100	99.117	Heterocephalus_glaber_female
ENSRROG00000044908	SF3A1	100	99.117	ENSHGLG00100013799	SF3A1	100	99.117	Heterocephalus_glaber_male
ENSRROG00000044908	SF3A1	100	80.252	ENSHCOG00000015423	sf3a1	99	80.774	Hippocampus_comes
ENSRROG00000044908	SF3A1	96	82.682	ENSIPUG00000002470	sf3a1	98	82.943	Ictalurus_punctatus
ENSRROG00000044908	SF3A1	100	99.117	ENSSTOG00000013892	SF3A1	100	99.117	Ictidomys_tridecemlineatus
ENSRROG00000044908	SF3A1	100	98.866	ENSJJAG00000022566	Sf3a1	100	98.866	Jaculus_jaculus
ENSRROG00000044908	SF3A1	100	82.893	ENSKMAG00000002400	sf3a1	98	84.896	Kryptolebias_marmoratus
ENSRROG00000044908	SF3A1	100	82.642	ENSLBEG00000022974	sf3a1	99	83.226	Labrus_bergylta
ENSRROG00000044908	SF3A1	100	87.077	ENSLACG00000003565	SF3A1	97	88.281	Latimeria_chalumnae
ENSRROG00000044908	SF3A1	100	85.088	ENSLOCG00000008251	sf3a1	97	86.883	Lepisosteus_oculatus
ENSRROG00000044908	SF3A1	98	62.293	ENSLAFG00000026032	-	98	61.911	Loxodonta_africana
ENSRROG00000044908	SF3A1	100	98.991	ENSLAFG00000000448	SF3A1	100	98.991	Loxodonta_africana
ENSRROG00000044908	SF3A1	100	99.748	ENSMFAG00000031979	SF3A1	100	99.748	Macaca_fascicularis
ENSRROG00000044908	SF3A1	100	99.748	ENSMMUG00000005547	SF3A1	100	99.748	Macaca_mulatta
ENSRROG00000044908	SF3A1	100	99.622	ENSMNEG00000037229	SF3A1	100	99.622	Macaca_nemestrina
ENSRROG00000044908	SF3A1	100	99.874	ENSMLEG00000041908	SF3A1	100	99.874	Mandrillus_leucophaeus
ENSRROG00000044908	SF3A1	97	85.640	ENSMAMG00000006460	sf3a1	97	85.770	Mastacembelus_armatus
ENSRROG00000044908	SF3A1	100	84.383	ENSMZEG00005009633	sf3a1	98	86.180	Maylandia_zebra
ENSRROG00000044908	SF3A1	95	94.180	ENSMGAG00000001330	SF3A1	99	93.411	Meleagris_gallopavo
ENSRROG00000044908	SF3A1	92	94.945	ENSMAUG00000020317	Sf3a1	94	94.945	Mesocricetus_auratus
ENSRROG00000044908	SF3A1	100	99.243	ENSMICG00000010038	SF3A1	100	99.243	Microcebus_murinus
ENSRROG00000044908	SF3A1	100	98.487	ENSMOCG00000008438	Sf3a1	100	98.487	Microtus_ochrogaster
ENSRROG00000044908	SF3A1	100	81.761	ENSMMOG00000015588	sf3a1	98	82.368	Mola_mola
ENSRROG00000044908	SF3A1	100	97.730	ENSMODG00000009270	SF3A1	100	97.730	Monodelphis_domestica
ENSRROG00000044908	SF3A1	100	84.509	ENSMALG00000000148	sf3a1	99	86.104	Monopterus_albus
ENSRROG00000044908	SF3A1	100	98.235	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.235	Mus_caroli
ENSRROG00000044908	SF3A1	100	98.235	ENSMUSG00000002129	Sf3a1	100	98.235	Mus_musculus
ENSRROG00000044908	SF3A1	100	97.982	MGP_PahariEiJ_G0016862	Sf3a1	100	97.982	Mus_pahari
ENSRROG00000044908	SF3A1	100	98.235	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.235	Mus_spretus
ENSRROG00000044908	SF3A1	100	98.739	ENSMPUG00000013144	SF3A1	100	98.739	Mustela_putorius_furo
ENSRROG00000044908	SF3A1	100	98.991	ENSMLUG00000002139	SF3A1	100	98.991	Myotis_lucifugus
ENSRROG00000044908	SF3A1	100	98.739	ENSNGAG00000016977	Sf3a1	100	98.739	Nannospalax_galili
ENSRROG00000044908	SF3A1	100	84.635	ENSNBRG00000016642	sf3a1	96	86.825	Neolamprologus_brichardi
ENSRROG00000044908	SF3A1	100	99.874	ENSNLEG00000003686	SF3A1	100	99.874	Nomascus_leucogenys
ENSRROG00000044908	SF3A1	96	87.895	ENSMEUG00000008741	SF3A1	100	87.895	Notamacropus_eugenii
ENSRROG00000044908	SF3A1	100	98.235	ENSOPRG00000016636	SF3A1	100	98.235	Ochotona_princeps
ENSRROG00000044908	SF3A1	100	99.117	ENSODEG00000002571	SF3A1	100	99.117	Octodon_degus
ENSRROG00000044908	SF3A1	100	84.230	ENSONIG00000010848	sf3a1	98	85.547	Oreochromis_niloticus
ENSRROG00000044908	SF3A1	100	98.487	ENSOCUG00000007633	SF3A1	100	98.487	Oryctolagus_cuniculus
ENSRROG00000044908	SF3A1	97	81.108	ENSORLG00000013050	sf3a1	99	83.445	Oryzias_latipes
ENSRROG00000044908	SF3A1	97	81.960	ENSORLG00020003236	sf3a1	94	83.578	Oryzias_latipes_hni
ENSRROG00000044908	SF3A1	100	82.264	ENSORLG00015017411	sf3a1	99	83.871	Oryzias_latipes_hsok
ENSRROG00000044908	SF3A1	100	82.642	ENSOMEG00000013362	sf3a1	99	83.484	Oryzias_melastigma
ENSRROG00000044908	SF3A1	100	99.117	ENSOGAG00000012931	SF3A1	100	99.117	Otolemur_garnettii
ENSRROG00000044908	SF3A1	100	97.100	ENSOARG00000006849	SF3A1	100	97.100	Ovis_aries
ENSRROG00000044908	SF3A1	100	98.613	ENSPPAG00000041790	SF3A1	100	98.613	Pan_paniscus
ENSRROG00000044908	SF3A1	100	98.865	ENSPPRG00000004391	SF3A1	100	98.865	Panthera_pardus
ENSRROG00000044908	SF3A1	97	98.834	ENSPTIG00000000844	SF3A1	100	98.834	Panthera_tigris_altaica
ENSRROG00000044908	SF3A1	100	99.622	ENSPTRG00000014240	SF3A1	100	99.622	Pan_troglodytes
ENSRROG00000044908	SF3A1	100	99.874	ENSPANG00000020772	SF3A1	100	99.874	Papio_anubis
ENSRROG00000044908	SF3A1	83	94.505	ENSPSIG00000012803	SF3A1	96	94.505	Pelodiscus_sinensis
ENSRROG00000044908	SF3A1	96	84.424	ENSPMGG00000023096	sf3a1	100	84.162	Periophthalmus_magnuspinnatus
ENSRROG00000044908	SF3A1	100	98.613	ENSPEMG00000009494	Sf3a1	100	98.613	Peromyscus_maniculatus_bairdii
ENSRROG00000044908	SF3A1	75	78.040	ENSPMAG00000007139	-	90	79.065	Petromyzon_marinus
ENSRROG00000044908	SF3A1	100	97.478	ENSPCIG00000022692	SF3A1	100	97.478	Phascolarctos_cinereus
ENSRROG00000044908	SF3A1	100	75.251	ENSPFOG00000016768	sf3a1	93	78.912	Poecilia_formosa
ENSRROG00000044908	SF3A1	100	83.522	ENSPLAG00000017268	sf3a1	97	85.098	Poecilia_latipinna
ENSRROG00000044908	SF3A1	84	85.994	ENSPMEG00000019811	sf3a1	98	85.241	Poecilia_mexicana
ENSRROG00000044908	SF3A1	100	83.648	ENSPREG00000010347	sf3a1	97	85.490	Poecilia_reticulata
ENSRROG00000044908	SF3A1	100	99.874	ENSPPYG00000011707	SF3A1	100	99.874	Pongo_abelii
ENSRROG00000044908	SF3A1	57	99.528	ENSPCAG00000003266	SF3A1	57	99.528	Procavia_capensis
ENSRROG00000044908	SF3A1	100	99.243	ENSPCOG00000026630	SF3A1	100	99.243	Propithecus_coquereli
ENSRROG00000044908	SF3A1	100	94.578	ENSPVAG00000017719	SF3A1	94	97.987	Pteropus_vampyrus
ENSRROG00000044908	SF3A1	100	84.383	ENSPNYG00000018706	sf3a1	98	86.180	Pundamilia_nyererei
ENSRROG00000044908	SF3A1	98	84.097	ENSPNAG00000003721	sf3a1	98	85.306	Pygocentrus_nattereri
ENSRROG00000044908	SF3A1	100	98.235	ENSRNOG00000005218	Sf3a1	100	98.235	Rattus_norvegicus
ENSRROG00000044908	SF3A1	100	100.000	ENSRBIG00000032167	SF3A1	100	100.000	Rhinopithecus_bieti
ENSRROG00000044908	SF3A1	97	95.220	ENSSBOG00000021960	SF3A1	100	99.409	Saimiri_boliviensis_boliviensis
ENSRROG00000044908	SF3A1	99	93.418	ENSSHAG00000003666	SF3A1	98	95.084	Sarcophilus_harrisii
ENSRROG00000044908	SF3A1	100	83.250	ENSSFOG00015004579	sf3a1	99	85.000	Scleropages_formosus
ENSRROG00000044908	SF3A1	100	81.761	ENSSMAG00000004275	sf3a1	99	82.005	Scophthalmus_maximus
ENSRROG00000044908	SF3A1	100	83.625	ENSSDUG00000022219	sf3a1	99	84.399	Seriola_dumerili
ENSRROG00000044908	SF3A1	100	83.625	ENSSLDG00000012642	sf3a1	99	84.399	Seriola_lalandi_dorsalis
ENSRROG00000044908	SF3A1	97	95.596	ENSSARG00000005960	SF3A1	100	95.596	Sorex_araneus
ENSRROG00000044908	SF3A1	96	92.098	ENSSPUG00000018863	SF3A1	100	91.667	Sphenodon_punctatus
ENSRROG00000044908	SF3A1	100	84.403	ENSSPAG00000011856	sf3a1	99	84.783	Stegastes_partitus
ENSRROG00000044908	SF3A1	100	98.865	ENSSSCG00000010002	SF3A1	100	98.865	Sus_scrofa
ENSRROG00000044908	SF3A1	95	94.195	ENSTGUG00000010547	SF3A1	99	93.645	Taeniopygia_guttata
ENSRROG00000044908	SF3A1	100	81.635	ENSTRUG00000006118	sf3a1	97	82.484	Takifugu_rubripes
ENSRROG00000044908	SF3A1	64	81.413	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSRROG00000044908	SF3A1	97	95.442	ENSTBEG00000012771	SF3A1	100	91.677	Tupaia_belangeri
ENSRROG00000044908	SF3A1	100	98.615	ENSTTRG00000001535	SF3A1	100	98.615	Tursiops_truncatus
ENSRROG00000044908	SF3A1	99	97.967	ENSUAMG00000006750	SF3A1	99	97.967	Ursus_americanus
ENSRROG00000044908	SF3A1	99	97.959	ENSUMAG00000016665	SF3A1	99	97.959	Ursus_maritimus
ENSRROG00000044908	SF3A1	100	98.739	ENSVVUG00000003075	SF3A1	100	98.739	Vulpes_vulpes
ENSRROG00000044908	SF3A1	100	85.696	ENSXETG00000016144	sf3a1	100	85.320	Xenopus_tropicalis
ENSRROG00000044908	SF3A1	100	82.893	ENSXCOG00000015653	sf3a1	99	83.142	Xiphophorus_couchianus
ENSRROG00000044908	SF3A1	100	83.019	ENSXMAG00000002753	sf3a1	99	83.269	Xiphophorus_maculatus