EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000045490 (Gene tree)
Gene ID: 104678134
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 18200 bases
Position: chrKN298624.1:208724-226923
Accession: 104678134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000045144	tRNA-synt_1g	PF09334.11	4.4e-10	1	1
ENSRROP00000045146	Anticodon_1	PF08264.13	1.6e-32	1	1
ENSRROP00000045144	Anticodon_1	PF08264.13	1.7e-32	1	1
ENSRROP00000045144	tRNA-synt_1	PF00133.22	3.2e-200	1	1
ENSRROP00000045146	tRNA-synt_1	PF00133.22	1e-176	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000069664	VARS-201	4353	XM_010383342	ENSRROP00000045144	1264 (aa)	XP_010381644	A0A2K6RVU0
ENSRROT00000069666	VARS-202	3708	-	ENSRROP00000045146	1235 (aa)	-	A0A2K6RVT9

Gene Model

Click here to download ENSRROG00000045490's gene model file

Pathways

Pathway ID	Pathway Name	Source
rro00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000045490's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000045490	VARS	79	52.713	ENSRROG00000043847	VARS2	91	51.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000045490	VARS	100	98.972	ENSG00000204394	VARS	100	98.972	Homo_sapiens
ENSRROG00000045490	VARS	98	64.796	ENSAPOG00000020921	vars	99	64.475	Acanthochromis_polyacanthus
ENSRROG00000045490	VARS	98	64.796	ENSAPOG00000020691	vars	99	64.475	Acanthochromis_polyacanthus
ENSRROG00000045490	VARS	100	95.257	ENSAMEG00000006417	VARS	100	95.257	Ailuropoda_melanoleuca
ENSRROG00000045490	VARS	100	65.725	ENSACIG00000013752	vars	100	65.412	Amphilophus_citrinellus
ENSRROG00000045490	VARS	100	64.701	ENSAOCG00000002447	vars	100	64.280	Amphiprion_ocellaris
ENSRROG00000045490	VARS	100	64.701	ENSAPEG00000010638	vars	99	64.875	Amphiprion_percula
ENSRROG00000045490	VARS	100	64.724	ENSATEG00000020219	vars	100	64.331	Anabas_testudineus
ENSRROG00000045490	VARS	90	70.512	ENSACAG00000029133	-	99	70.945	Anolis_carolinensis
ENSRROG00000045490	VARS	100	97.547	ENSANAG00000015453	VARS	100	97.547	Aotus_nancymaae
ENSRROG00000045490	VARS	100	65.039	ENSACLG00000025699	vars	97	64.729	Astatotilapia_calliptera
ENSRROG00000045490	VARS	94	66.138	ENSAMXG00000017716	vars	95	66.138	Astyanax_mexicanus
ENSRROG00000045490	VARS	100	94.937	ENSBTAG00000005631	VARS	100	94.937	Bos_taurus
ENSRROG00000045490	VARS	100	97.627	ENSCJAG00000002604	VARS	100	97.627	Callithrix_jacchus
ENSRROG00000045490	VARS	100	94.620	ENSCAFG00000000636	VARS	100	94.620	Canis_familiaris
ENSRROG00000045490	VARS	94	94.510	ENSCAFG00020020790	VARS	96	94.510	Canis_lupus_dingo
ENSRROG00000045490	VARS	100	95.174	ENSCHIG00000011008	VARS	100	95.174	Capra_hircus
ENSRROG00000045490	VARS	100	96.044	ENSTSYG00000001567	VARS	100	96.044	Carlito_syrichta
ENSRROG00000045490	VARS	91	90.657	ENSCAPG00000013736	VARS	99	90.657	Cavia_aperea
ENSRROG00000045490	VARS	100	91.772	ENSCPOG00000000870	VARS	100	91.772	Cavia_porcellus
ENSRROG00000045490	VARS	100	97.785	ENSCCAG00000035656	VARS	100	97.785	Cebus_capucinus
ENSRROG00000045490	VARS	100	99.446	ENSCATG00000022394	VARS	100	99.446	Cercocebus_atys
ENSRROG00000045490	VARS	88	89.851	ENSCLAG00000009470	VARS	92	89.851	Chinchilla_lanigera
ENSRROG00000045490	VARS	100	99.763	ENSCSAG00000008784	VARS	100	99.763	Chlorocebus_sabaeus
ENSRROG00000045490	VARS	77	74.333	ENSCPBG00000007943	VARS	96	74.435	Chrysemys_picta_bellii
ENSRROG00000045490	VARS	100	99.446	ENSCANG00000033570	VARS	100	99.446	Colobus_angolensis_palliatus
ENSRROG00000045490	VARS	100	93.117	ENSCGRG00001005686	Vars	100	93.117	Cricetulus_griseus_chok1gshd
ENSRROG00000045490	VARS	92	88.023	ENSCGRG00000013352	Vars	78	88.023	Cricetulus_griseus_crigri
ENSRROG00000045490	VARS	100	64.427	ENSCSEG00000019652	vars	100	64.506	Cynoglossus_semilaevis
ENSRROG00000045490	VARS	100	65.190	ENSCVAG00000022398	vars	100	65.039	Cyprinodon_variegatus
ENSRROG00000045490	VARS	100	65.116	ENSDARG00000044575	vars	100	65.268	Danio_rerio
ENSRROG00000045490	VARS	84	93.227	ENSDORG00000016433	Vars	95	93.227	Dipodomys_ordii
ENSRROG00000045490	VARS	69	86.618	ENSETEG00000003824	VARS	76	86.618	Echinops_telfairi
ENSRROG00000045490	VARS	59	60.164	ENSEBUG00000004637	vars	100	62.225	Eptatretus_burgeri
ENSRROG00000045490	VARS	50	70.652	ENSEBUG00000007086	vars	84	69.808	Eptatretus_burgeri
ENSRROG00000045490	VARS	100	95.807	ENSEASG00005015673	VARS	100	95.807	Equus_asinus_asinus
ENSRROG00000045490	VARS	100	94.783	ENSECAG00000014620	VARS	100	95.257	Equus_caballus
ENSRROG00000045490	VARS	83	93.080	ENSEEUG00000004116	VARS	83	93.080	Erinaceus_europaeus
ENSRROG00000045490	VARS	100	64.379	ENSELUG00000006550	vars	97	64.181	Esox_lucius
ENSRROG00000045490	VARS	100	94.858	ENSFCAG00000004510	VARS	100	94.858	Felis_catus
ENSRROG00000045490	VARS	82	91.959	ENSFDAG00000011401	VARS	100	91.959	Fukomys_damarensis
ENSRROG00000045490	VARS	100	65.268	ENSFHEG00000010672	vars	100	65.116	Fundulus_heteroclitus
ENSRROG00000045490	VARS	92	66.140	ENSGMOG00000014908	vars	97	66.223	Gadus_morhua
ENSRROG00000045490	VARS	100	65.525	ENSGAFG00000021630	vars	100	65.501	Gambusia_affinis
ENSRROG00000045490	VARS	92	66.416	ENSGACG00000009601	vars	98	66.250	Gasterosteus_aculeatus
ENSRROG00000045490	VARS	50	64.984	ENSGAGG00000006508	-	91	64.353	Gopherus_agassizii
ENSRROG00000045490	VARS	100	99.051	ENSGGOG00000011364	VARS	100	99.051	Gorilla_gorilla
ENSRROG00000045490	VARS	100	64.961	ENSHBUG00000017151	vars	97	64.651	Haplochromis_burtoni
ENSRROG00000045490	VARS	100	90.823	ENSHGLG00000011646	VARS	100	90.506	Heterocephalus_glaber_female
ENSRROG00000045490	VARS	93	83.306	ENSHGLG00100018062	VARS	100	83.223	Heterocephalus_glaber_male
ENSRROG00000045490	VARS	99	64.496	ENSHCOG00000012198	vars	99	64.669	Hippocampus_comes
ENSRROG00000045490	VARS	100	65.370	ENSIPUG00000005218	vars	100	65.370	Ictalurus_punctatus
ENSRROG00000045490	VARS	100	94.545	ENSSTOG00000013112	VARS	100	94.545	Ictidomys_tridecemlineatus
ENSRROG00000045490	VARS	100	72.152	ENSJJAG00000015343	-	100	72.627	Jaculus_jaculus
ENSRROG00000045490	VARS	100	91.456	ENSJJAG00000019749	-	100	91.456	Jaculus_jaculus
ENSRROG00000045490	VARS	100	65.087	ENSKMAG00000009455	vars	100	64.929	Kryptolebias_marmoratus
ENSRROG00000045490	VARS	100	64.664	ENSLBEG00000010341	vars	100	64.506	Labrus_bergylta
ENSRROG00000045490	VARS	94	62.366	ENSLACG00000015232	VARS	99	62.787	Latimeria_chalumnae
ENSRROG00000045490	VARS	100	66.953	ENSLOCG00000004240	vars	100	67.188	Lepisosteus_oculatus
ENSRROG00000045490	VARS	100	93.750	ENSLAFG00000023090	VARS	100	94.225	Loxodonta_africana
ENSRROG00000045490	VARS	100	99.684	ENSMFAG00000001032	VARS	100	99.684	Macaca_fascicularis
ENSRROG00000045490	VARS	100	99.684	ENSMMUG00000006828	VARS	100	99.684	Macaca_mulatta
ENSRROG00000045490	VARS	100	99.684	ENSMNEG00000042072	VARS	100	99.684	Macaca_nemestrina
ENSRROG00000045490	VARS	100	99.446	ENSMLEG00000039307	VARS	100	99.446	Mandrillus_leucophaeus
ENSRROG00000045490	VARS	100	64.569	ENSMAMG00000003949	vars	100	64.977	Mastacembelus_armatus
ENSRROG00000045490	VARS	100	65.039	ENSMZEG00005018327	vars	100	64.483	Maylandia_zebra
ENSRROG00000045490	VARS	100	92.722	ENSMAUG00000006715	Vars	100	92.722	Mesocricetus_auratus
ENSRROG00000045490	VARS	100	95.016	ENSMICG00000003548	VARS	100	95.771	Microcebus_murinus
ENSRROG00000045490	VARS	100	90.032	ENSMOCG00000015404	Vars	100	90.506	Microtus_ochrogaster
ENSRROG00000045490	VARS	100	64.286	ENSMMOG00000015801	vars	100	64.286	Mola_mola
ENSRROG00000045490	VARS	100	86.788	ENSMODG00000015204	-	100	86.788	Monodelphis_domestica
ENSRROG00000045490	VARS	99	64.775	ENSMALG00000022532	vars	99	64.308	Monopterus_albus
ENSRROG00000045490	VARS	100	93.275	MGP_CAROLIEiJ_G0021491	Vars	100	93.671	Mus_caroli
ENSRROG00000045490	VARS	100	93.275	ENSMUSG00000007029	Vars	100	93.671	Mus_musculus
ENSRROG00000045490	VARS	100	92.642	MGP_PahariEiJ_G0020486	Vars	100	93.038	Mus_pahari
ENSRROG00000045490	VARS	100	93.354	MGP_SPRETEiJ_G0022396	Vars	100	93.750	Mus_spretus
ENSRROG00000045490	VARS	100	95.095	ENSMPUG00000010821	VARS	100	95.095	Mustela_putorius_furo
ENSRROG00000045490	VARS	78	93.725	ENSMLUG00000013126	VARS	100	93.725	Myotis_lucifugus
ENSRROG00000045490	VARS	100	92.247	ENSNGAG00000012151	Vars	100	92.247	Nannospalax_galili
ENSRROG00000045490	VARS	100	64.729	ENSNBRG00000020520	vars	100	64.419	Neolamprologus_brichardi
ENSRROG00000045490	VARS	100	98.180	ENSNLEG00000006351	VARS	100	98.180	Nomascus_leucogenys
ENSRROG00000045490	VARS	100	83.149	ENSMEUG00000011378	VARS	100	83.149	Notamacropus_eugenii
ENSRROG00000045490	VARS	100	93.987	ENSOPRG00000003607	VARS	100	93.987	Ochotona_princeps
ENSRROG00000045490	VARS	100	91.456	ENSODEG00000017681	VARS	100	91.456	Octodon_degus
ENSRROG00000045490	VARS	100	65.442	ENSONIG00000013064	vars	99	67.910	Oreochromis_niloticus
ENSRROG00000045490	VARS	77	78.741	ENSOANG00000005400	VARS	98	78.266	Ornithorhynchus_anatinus
ENSRROG00000045490	VARS	100	92.192	ENSOCUG00000022463	VARS	100	92.192	Oryctolagus_cuniculus
ENSRROG00000045490	VARS	100	64.373	ENSORLG00000013063	vars	100	64.521	Oryzias_latipes
ENSRROG00000045490	VARS	100	65.073	ENSORLG00020003504	vars	100	65.050	Oryzias_latipes_hni
ENSRROG00000045490	VARS	100	64.969	ENSORLG00015009001	vars	100	64.946	Oryzias_latipes_hsok
ENSRROG00000045490	VARS	100	64.815	ENSOMEG00000015016	vars	100	64.792	Oryzias_melastigma
ENSRROG00000045490	VARS	100	95.174	ENSOGAG00000007515	VARS	100	95.174	Otolemur_garnettii
ENSRROG00000045490	VARS	100	99.209	ENSPPAG00000034012	VARS	100	99.209	Pan_paniscus
ENSRROG00000045490	VARS	100	95.016	ENSPPRG00000014855	VARS	100	95.016	Panthera_pardus
ENSRROG00000045490	VARS	85	94.981	ENSPTIG00000010462	VARS	95	94.963	Panthera_tigris_altaica
ENSRROG00000045490	VARS	100	99.130	ENSPTRG00000017985	VARS	100	99.130	Pan_troglodytes
ENSRROG00000045490	VARS	100	97.871	ENSPANG00000014565	VARS	100	97.871	Papio_anubis
ENSRROG00000045490	VARS	100	64.015	ENSPKIG00000016304	vars	100	64.170	Paramormyrops_kingsleyae
ENSRROG00000045490	VARS	100	65.485	ENSPMGG00000023909	vars	100	65.563	Periophthalmus_magnuspinnatus
ENSRROG00000045490	VARS	100	93.829	ENSPEMG00000006639	Vars	100	93.829	Peromyscus_maniculatus_bairdii
ENSRROG00000045490	VARS	100	86.313	ENSPCIG00000018553	VARS	100	86.313	Phascolarctos_cinereus
ENSRROG00000045490	VARS	100	65.759	ENSPFOG00000015690	vars	100	65.734	Poecilia_formosa
ENSRROG00000045490	VARS	100	66.090	ENSPLAG00000009590	vars	100	66.090	Poecilia_latipinna
ENSRROG00000045490	VARS	100	65.759	ENSPMEG00000004708	vars	100	65.734	Poecilia_mexicana
ENSRROG00000045490	VARS	100	64.044	ENSPREG00000013264	vars	100	63.636	Poecilia_reticulata
ENSRROG00000045490	VARS	100	97.310	ENSPPYG00000016460	VARS	100	97.310	Pongo_abelii
ENSRROG00000045490	VARS	86	92.639	ENSPCAG00000013565	VARS	86	92.639	Procavia_capensis
ENSRROG00000045490	VARS	100	95.257	ENSPCOG00000010942	VARS	100	95.731	Propithecus_coquereli
ENSRROG00000045490	VARS	100	91.456	ENSPVAG00000012403	VARS	100	91.456	Pteropus_vampyrus
ENSRROG00000045490	VARS	100	64.961	ENSPNYG00000022511	vars	100	64.651	Pundamilia_nyererei
ENSRROG00000045490	VARS	100	64.701	ENSPNAG00000020962	vars	100	64.546	Pygocentrus_nattereri
ENSRROG00000045490	VARS	100	93.434	ENSRNOG00000000867	Vars	100	93.434	Rattus_norvegicus
ENSRROG00000045490	VARS	100	100.000	ENSRBIG00000041669	VARS	100	100.000	Rhinopithecus_bieti
ENSRROG00000045490	VARS	100	97.310	ENSSBOG00000035402	VARS	100	97.310	Saimiri_boliviensis_boliviensis
ENSRROG00000045490	VARS	100	81.697	ENSSHAG00000006937	VARS	100	81.932	Sarcophilus_harrisii
ENSRROG00000045490	VARS	100	64.788	ENSSFOG00015014272	vars	100	64.865	Scleropages_formosus
ENSRROG00000045490	VARS	100	63.700	ENSSMAG00000009596	vars	99	63.439	Scophthalmus_maximus
ENSRROG00000045490	VARS	100	64.628	ENSSDUG00000014177	vars	100	64.319	Seriola_dumerili
ENSRROG00000045490	VARS	100	64.551	ENSSLDG00000025316	vars	100	64.241	Seriola_lalandi_dorsalis
ENSRROG00000045490	VARS	100	65.008	ENSSPAG00000017068	vars	100	65.187	Stegastes_partitus
ENSRROG00000045490	VARS	100	93.202	ENSSSCG00000038950	VARS	100	93.676	Sus_scrofa
ENSRROG00000045490	VARS	82	64.334	ENSTRUG00000012307	vars	98	64.279	Takifugu_rubripes
ENSRROG00000045490	VARS	100	65.442	ENSTNIG00000008011	vars	100	65.439	Tetraodon_nigroviridis
ENSRROG00000045490	VARS	54	95.506	ENSTBEG00000004728	-	60	95.506	Tupaia_belangeri
ENSRROG00000045490	VARS	100	86.234	ENSTTRG00000014128	VARS	100	86.234	Tursiops_truncatus
ENSRROG00000045490	VARS	100	91.431	ENSUAMG00000010424	VARS	100	91.431	Ursus_americanus
ENSRROG00000045490	VARS	93	94.921	ENSUMAG00000013486	VARS	98	95.079	Ursus_maritimus
ENSRROG00000045490	VARS	100	94.229	ENSVVUG00000021323	VARS	100	94.308	Vulpes_vulpes
ENSRROG00000045490	VARS	96	63.056	ENSXETG00000024076	vars	98	62.864	Xenopus_tropicalis
ENSRROG00000045490	VARS	100	65.669	ENSXCOG00000019172	vars	100	65.645	Xiphophorus_couchianus
ENSRROG00000045490	VARS	100	65.447	ENSXMAG00000010927	vars	100	65.423	Xiphophorus_maculatus