EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSRROG00000045509 (Gene tree)
Gene ID
104670456
Gene Symbol
SMARCA4
Alias
BAF190|BRG1|FLJ39786|SNF2|SNF2-BETA|SNF2L4|SNF2LB|SWI2|hSNF2b
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Rhinopithecus_roxellana
Status
putative
Strand
Minus strand
Length
100260 bases
Position
chrKN297154.1:397253-497512
Accession
104670456
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRROP00000045581ResIIIPF04851.152.7e-0911
ENSRROP00000045593ResIIIPF04851.152.7e-0911
ENSRROP00000045576ResIIIPF04851.152.8e-0911
ENSRROP00000045601ResIIIPF04851.152.8e-0911
ENSRROP00000045598ResIIIPF04851.152.8e-0911
ENSRROP00000045597ResIIIPF04851.152.8e-0911
ENSRROP00000045596ResIIIPF04851.152.8e-0911
ENSRROP00000045594ResIIIPF04851.152.8e-0911
ENSRROP00000045598BRKPF07533.161.9e-1711
ENSRROP00000045596BRKPF07533.162e-1711
ENSRROP00000045581BRKPF07533.162.2e-1711
ENSRROP00000045601BRKPF07533.162.2e-1711
ENSRROP00000045576BRKPF07533.162.2e-1711
ENSRROP00000045597BRKPF07533.162.2e-1711
ENSRROP00000045593BRKPF07533.162.2e-1711
ENSRROP00000045594BRKPF07533.162.2e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRROT00000070122SMARCA4-2084947-ENSRROP000000456011648 (aa)-A0A2K6RX42
ENSRROT00000070118SMARCA4-2064974-ENSRROP000000455971657 (aa)-A0A2K6RX57
ENSRROT00000070119SMARCA4-2074968-ENSRROP000000455981655 (aa)-A0A2K6RX40
ENSRROT00000070114SMARCA4-2034896-ENSRROP000000455931631 (aa)-A0A2K6RX35
ENSRROT00000070115SMARCA4-2045040XM_010373731ENSRROP000000455941679 (aa)XP_010372033A0A2K6RX38
ENSRROT00000070117SMARCA4-2055031-ENSRROP000000455961676 (aa)-A0A2K6RX37
ENSRROT00000070102SMARCA4-2025805XM_010373730ENSRROP000000455811614 (aa)XP_010372032A0A2K6RX23
ENSRROT00000070097SMARCA4-2015901XM_010373729ENSRROP000000455761646 (aa)XP_010372031A0A2K6RX18
Gene Model
Click here to download ENSRROG00000045509's gene model file
Pathways
Pathway IDPathway NameSource
rro04714ThermogenesisKEGG
rro05225Hepatocellular carcinomaKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000045509's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRROG00000045509SMARCA49875.345ENSRROG00000019271SMARCA29681.285
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRROG00000045509SMARCA410099.881ENSG00000127616SMARCA410099.881Homo_sapiens
ENSRROG00000045509SMARCA47588.120ENSAPOG00000003509smarca4a9886.491Acanthochromis_polyacanthus
ENSRROG00000045509SMARCA49583.978ENSAPOG00000004542SMARCA49883.313Acanthochromis_polyacanthus
ENSRROG00000045509SMARCA410096.131ENSAMEG00000010868SMARCA410096.131Ailuropoda_melanoleuca
ENSRROG00000045509SMARCA49787.680ENSACIG00000021550smarca4a9887.230Amphilophus_citrinellus
ENSRROG00000045509SMARCA49584.701ENSACIG00000003035-9687.888Amphilophus_citrinellus
ENSRROG00000045509SMARCA48985.892ENSAOCG00000019167smarca4a10085.912Amphiprion_ocellaris
ENSRROG00000045509SMARCA49486.899ENSAOCG00000009450-9787.558Amphiprion_ocellaris
ENSRROG00000045509SMARCA48985.961ENSAPEG00000015559smarca4a10085.981Amphiprion_percula
ENSRROG00000045509SMARCA410083.067ENSAPEG00000023108-9982.959Amphiprion_percula
ENSRROG00000045509SMARCA410087.142ENSATEG00000011524smarca4a10087.333Anabas_testudineus
ENSRROG00000045509SMARCA49983.626ENSATEG00000001094-9589.679Anabas_testudineus
ENSRROG00000045509SMARCA410099.643ENSANAG00000036991SMARCA410099.643Aotus_nancymaae
ENSRROG00000045509SMARCA49788.776ENSACLG00000000163smarca4a9888.180Astatotilapia_calliptera
ENSRROG00000045509SMARCA49584.043ENSACLG00000008638-9883.094Astatotilapia_calliptera
ENSRROG00000045509SMARCA49487.248ENSAMXG00000011238-9887.044Astyanax_mexicanus
ENSRROG00000045509SMARCA49782.826ENSAMXG00000021023smarca4a9887.500Astyanax_mexicanus
ENSRROG00000045509SMARCA410098.885ENSBTAG00000019220SMARCA410098.885Bos_taurus
ENSRROG00000045509SMARCA410099.643ENSCJAG00000005936SMARCA410099.643Callithrix_jacchus
ENSRROG00000045509SMARCA410099.628ENSCAFG00000017584SMARCA410099.628Canis_familiaris
ENSRROG00000045509SMARCA410099.628ENSCAFG00020024620SMARCA49999.628Canis_lupus_dingo
ENSRROG00000045509SMARCA410094.434ENSCHIG00000015318SMARCA410094.434Capra_hircus
ENSRROG00000045509SMARCA410099.319ENSTSYG00000012966SMARCA410099.074Carlito_syrichta
ENSRROG00000045509SMARCA410090.653ENSCAPG00000015932SMARCA49597.628Cavia_aperea
ENSRROG00000045509SMARCA410098.885ENSCPOG00000015549SMARCA410098.885Cavia_porcellus
ENSRROG00000045509SMARCA410095.933ENSCCAG00000031660SMARCA410095.746Cebus_capucinus
ENSRROG00000045509SMARCA410099.881ENSCATG00000029530SMARCA410099.881Cercocebus_atys
ENSRROG00000045509SMARCA410098.513ENSCLAG00000011946SMARCA410098.513Chinchilla_lanigera
ENSRROG00000045509SMARCA410097.155ENSCPBG00000009994SMARCA410097.155Chrysemys_picta_bellii
ENSRROG00000045509SMARCA410099.881ENSCANG00000036013SMARCA410099.881Colobus_angolensis_palliatus
ENSRROG00000045509SMARCA410099.195ENSCGRG00001016732Smarca410099.195Cricetulus_griseus_chok1gshd
ENSRROG00000045509SMARCA410099.195ENSCGRG00000017242Smarca410099.195Cricetulus_griseus_crigri
ENSRROG00000045509SMARCA410083.558ENSCSEG00000014771smarca4a10087.142Cynoglossus_semilaevis
ENSRROG00000045509SMARCA49984.283ENSCVAG00000003018-9884.596Cyprinodon_variegatus
ENSRROG00000045509SMARCA49787.014ENSCVAG00000006979smarca4a9986.836Cyprinodon_variegatus
ENSRROG00000045509SMARCA410087.165ENSDARG00000077226smarca4a10087.287Danio_rerio
ENSRROG00000045509SMARCA49284.207ENSDARG00000104339SMARCA49584.595Danio_rerio
ENSRROG00000045509SMARCA410091.570ENSDNOG00000048847SMARCA49398.943Dasypus_novemcinctus
ENSRROG00000045509SMARCA48393.813ENSDORG00000002544Smarca492100.000Dipodomys_ordii
ENSRROG00000045509SMARCA49487.389ENSETEG00000013361SMARCA49487.389Echinops_telfairi
ENSRROG00000045509SMARCA410099.318ENSEASG00005006167SMARCA49999.141Equus_asinus_asinus
ENSRROG00000045509SMARCA410099.380ENSECAG00000008334SMARCA410099.380Equus_caballus
ENSRROG00000045509SMARCA410086.518ENSELUG00000010247smarca4a10084.583Esox_lucius
ENSRROG00000045509SMARCA49977.534ENSELUG00000023232-9385.988Esox_lucius
ENSRROG00000045509SMARCA410099.443ENSFCAG00000004894SMARCA410099.443Felis_catus
ENSRROG00000045509SMARCA47497.649ENSFALG00000004208SMARCA49391.917Ficedula_albicollis
ENSRROG00000045509SMARCA49298.784ENSFDAG00000012237SMARCA49798.784Fukomys_damarensis
ENSRROG00000045509SMARCA49686.407ENSFHEG00000010182smarca4a10086.930Fundulus_heteroclitus
ENSRROG00000045509SMARCA410084.207ENSFHEG00000007902-9885.009Fundulus_heteroclitus
ENSRROG00000045509SMARCA49280.720ENSGMOG00000005756-8779.503Gadus_morhua
ENSRROG00000045509SMARCA49380.428ENSGMOG00000002649smarca4a8781.882Gadus_morhua
ENSRROG00000045509SMARCA47396.870ENSGALG00000047145SMARCA410096.870Gallus_gallus
ENSRROG00000045509SMARCA49982.051ENSGAFG00000008827-9882.217Gambusia_affinis
ENSRROG00000045509SMARCA49088.904ENSGAFG00000014900smarca4a9988.527Gambusia_affinis
ENSRROG00000045509SMARCA49885.857ENSGACG00000006691smarca4a10085.523Gasterosteus_aculeatus
ENSRROG00000045509SMARCA49980.651ENSGACG00000016033-9978.443Gasterosteus_aculeatus
ENSRROG00000045509SMARCA410097.274ENSGAGG00000016757SMARCA410097.274Gopherus_agassizii
ENSRROG00000045509SMARCA410099.876ENSGGOG00000009882SMARCA410099.876Gorilla_gorilla
ENSRROG00000045509SMARCA410083.892ENSHBUG00000005447-9787.529Haplochromis_burtoni
ENSRROG00000045509SMARCA410087.584ENSHBUG00000021172smarca4a10087.523Haplochromis_burtoni
ENSRROG00000045509SMARCA410098.643ENSHGLG00000010519SMARCA410098.643Heterocephalus_glaber_female
ENSRROG00000045509SMARCA410097.590ENSHGLG00100013774SMARCA410097.590Heterocephalus_glaber_male
ENSRROG00000045509SMARCA49586.603ENSHCOG00000009510smarca4a9686.876Hippocampus_comes
ENSRROG00000045509SMARCA49884.630ENSIPUG00000016346-9883.835Ictalurus_punctatus
ENSRROG00000045509SMARCA410087.827ENSIPUG00000006107smarca4a10087.827Ictalurus_punctatus
ENSRROG00000045509SMARCA410099.566ENSSTOG00000007939SMARCA410099.566Ictidomys_tridecemlineatus
ENSRROG00000045509SMARCA410097.379ENSJJAG00000012877Smarca410097.379Jaculus_jaculus
ENSRROG00000045509SMARCA410086.125ENSKMAG00000011931smarca4a10086.430Kryptolebias_marmoratus
ENSRROG00000045509SMARCA410083.819ENSKMAG00000019518-9887.346Kryptolebias_marmoratus
ENSRROG00000045509SMARCA49583.048ENSLBEG00000020655-8183.151Labrus_bergylta
ENSRROG00000045509SMARCA49585.974ENSLBEG00000017383smarca4a7789.017Labrus_bergylta
ENSRROG00000045509SMARCA45288.902ENSLACG00000015309SMARCA410088.425Latimeria_chalumnae
ENSRROG00000045509SMARCA410087.956ENSLOCG00000007820smarca4a9389.778Lepisosteus_oculatus
ENSRROG00000045509SMARCA410099.505ENSLAFG00000001433SMARCA410099.505Loxodonta_africana
ENSRROG00000045509SMARCA410099.881ENSMFAG00000032146SMARCA410099.881Macaca_fascicularis
ENSRROG00000045509SMARCA410099.878ENSMMUG00000012042SMARCA410099.878Macaca_mulatta
ENSRROG00000045509SMARCA410099.632ENSMNEG00000028512SMARCA410099.632Macaca_nemestrina
ENSRROG00000045509SMARCA410099.821ENSMLEG00000034976SMARCA410099.821Mandrillus_leucophaeus
ENSRROG00000045509SMARCA49586.840ENSMAMG00000002841-9886.931Mastacembelus_armatus
ENSRROG00000045509SMARCA410087.279ENSMAMG00000009256smarca4a10087.219Mastacembelus_armatus
ENSRROG00000045509SMARCA49486.184ENSMZEG00005023861-9883.794Maylandia_zebra
ENSRROG00000045509SMARCA410087.591ENSMZEG00005003889smarca4a10087.287Maylandia_zebra
ENSRROG00000045509SMARCA410098.887ENSMAUG00000020731Smarca410098.887Mesocricetus_auratus
ENSRROG00000045509SMARCA410099.443ENSMICG00000009806SMARCA410099.443Microcebus_murinus
ENSRROG00000045509SMARCA410098.949ENSMOCG00000022209Smarca410098.949Microtus_ochrogaster
ENSRROG00000045509SMARCA49585.513ENSMMOG00000007571smarca4a9885.467Mola_mola
ENSRROG00000045509SMARCA49981.835ENSMMOG00000008466-9885.277Mola_mola
ENSRROG00000045509SMARCA410096.902ENSMODG00000006287SMARCA410096.902Monodelphis_domestica
ENSRROG00000045509SMARCA49687.042ENSMALG00000003388smarca4a10087.134Monopterus_albus
ENSRROG00000045509SMARCA48983.668ENSMALG00000021534-9987.353Monopterus_albus
ENSRROG00000045509SMARCA410099.257MGP_CAROLIEiJ_G0031879Smarca410099.257Mus_caroli
ENSRROG00000045509SMARCA410099.257ENSMUSG00000032187Smarca410099.257Mus_musculus
ENSRROG00000045509SMARCA410098.761MGP_PahariEiJ_G0014745Smarca410098.761Mus_pahari
ENSRROG00000045509SMARCA410099.257MGP_SPRETEiJ_G0033003Smarca410099.257Mus_spretus
ENSRROG00000045509SMARCA410099.628ENSMPUG00000005711SMARCA410099.628Mustela_putorius_furo
ENSRROG00000045509SMARCA410099.504ENSMLUG00000004491-10099.504Myotis_lucifugus
ENSRROG00000045509SMARCA410098.575ENSNGAG00000021852Smarca410098.575Nannospalax_galili
ENSRROG00000045509SMARCA49586.476ENSNBRG00000011457smarca4a9686.299Neolamprologus_brichardi
ENSRROG00000045509SMARCA48982.296ENSNBRG00000018865-9987.312Neolamprologus_brichardi
ENSRROG00000045509SMARCA410093.929ENSNLEG00000012389SMARCA410093.929Nomascus_leucogenys
ENSRROG00000045509SMARCA475100.000ENSOPRG00000000885-75100.000Ochotona_princeps
ENSRROG00000045509SMARCA410095.821ENSODEG00000017127SMARCA410095.821Octodon_degus
ENSRROG00000045509SMARCA410088.279ENSONIG00000008196smarca4a10088.293Oreochromis_niloticus
ENSRROG00000045509SMARCA410083.952ENSONIG00000018040-10083.144Oreochromis_niloticus
ENSRROG00000045509SMARCA49991.220ENSOCUG00000001787SMARCA49991.220Oryctolagus_cuniculus
ENSRROG00000045509SMARCA49583.606ENSORLG00000003955-9787.446Oryzias_latipes
ENSRROG00000045509SMARCA410083.069ENSORLG00000015452smarca4a10085.793Oryzias_latipes
ENSRROG00000045509SMARCA49583.616ENSORLG00020009728-9787.457Oryzias_latipes_hni
ENSRROG00000045509SMARCA410085.845ENSORLG00020004611smarca4a10085.775Oryzias_latipes_hni
ENSRROG00000045509SMARCA410085.967ENSORLG00015016560smarca4a10085.915Oryzias_latipes_hsok
ENSRROG00000045509SMARCA49983.192ENSORLG00015007739-9982.427Oryzias_latipes_hsok
ENSRROG00000045509SMARCA410086.561ENSOMEG00000007486smarca4a10087.004Oryzias_melastigma
ENSRROG00000045509SMARCA49683.509ENSOMEG00000016626-9983.433Oryzias_melastigma
ENSRROG00000045509SMARCA48997.576ENSOGAG00000016148SMARCA410097.576Otolemur_garnettii
ENSRROG00000045509SMARCA410097.833ENSOARG00000017454SMARCA410097.833Ovis_aries
ENSRROG00000045509SMARCA410099.881ENSPPAG00000043191SMARCA410099.881Pan_paniscus
ENSRROG00000045509SMARCA410099.443ENSPPRG00000000064SMARCA410099.443Panthera_pardus
ENSRROG00000045509SMARCA49399.034ENSPTIG00000017447SMARCA49499.034Panthera_tigris_altaica
ENSRROG00000045509SMARCA410099.881ENSPTRG00000010488SMARCA410099.881Pan_troglodytes
ENSRROG00000045509SMARCA410099.762ENSPANG00000011042SMARCA410099.762Papio_anubis
ENSRROG00000045509SMARCA49886.404ENSPKIG00000010087-9887.085Paramormyrops_kingsleyae
ENSRROG00000045509SMARCA410088.024ENSPKIG00000007770SMARCA410088.085Paramormyrops_kingsleyae
ENSRROG00000045509SMARCA410090.418ENSPSIG00000005547SMARCA410089.933Pelodiscus_sinensis
ENSRROG00000045509SMARCA410099.072ENSPEMG00000020389Smarca410099.072Peromyscus_maniculatus_bairdii
ENSRROG00000045509SMARCA410098.699ENSPCIG00000017138SMARCA410098.699Phascolarctos_cinereus
ENSRROG00000045509SMARCA410083.642ENSPFOG00000012930-9983.502Poecilia_formosa
ENSRROG00000045509SMARCA410085.419ENSPFOG00000007892smarca4a10086.679Poecilia_formosa
ENSRROG00000045509SMARCA48289.925ENSPLAG00000018616-9884.095Poecilia_latipinna
ENSRROG00000045509SMARCA49886.818ENSPLAG00000014294smarca4a10086.740Poecilia_latipinna
ENSRROG00000045509SMARCA49387.961ENSPMEG00000003725smarca4a9787.580Poecilia_mexicana
ENSRROG00000045509SMARCA49984.784ENSPMEG00000008929-9884.721Poecilia_mexicana
ENSRROG00000045509SMARCA49785.569ENSPREG00000014608smarca4a10086.493Poecilia_reticulata
ENSRROG00000045509SMARCA49487.107ENSPREG00000014823-9784.220Poecilia_reticulata
ENSRROG00000045509SMARCA410097.915ENSPPYG00000009568SMARCA410097.915Pongo_abelii
ENSRROG00000045509SMARCA48099.338ENSPCAG00000014054SMARCA47799.338Procavia_capensis
ENSRROG00000045509SMARCA410099.504ENSPCOG00000023011SMARCA410099.320Propithecus_coquereli
ENSRROG00000045509SMARCA49699.435ENSPVAG00000007787SMARCA49699.435Pteropus_vampyrus
ENSRROG00000045509SMARCA49582.487ENSPNYG00000023995-9787.529Pundamilia_nyererei
ENSRROG00000045509SMARCA49786.586ENSPNYG00000000717smarca4a9687.964Pundamilia_nyererei
ENSRROG00000045509SMARCA49586.650ENSPNAG00000006636-9786.273Pygocentrus_nattereri
ENSRROG00000045509SMARCA49390.738ENSPNAG00000024136smarca4a9887.949Pygocentrus_nattereri
ENSRROG00000045509SMARCA410099.318ENSRNOG00000009271Smarca410099.318Rattus_norvegicus
ENSRROG00000045509SMARCA410099.940ENSRBIG00000038696SMARCA410099.940Rhinopithecus_bieti
ENSRROG00000045509SMARCA410099.442ENSSBOG00000026896SMARCA410099.700Saimiri_boliviensis_boliviensis
ENSRROG00000045509SMARCA410098.637ENSSHAG00000001642SMARCA410098.637Sarcophilus_harrisii
ENSRROG00000045509SMARCA49190.359ENSSFOG00015009921-9190.868Scleropages_formosus
ENSRROG00000045509SMARCA410088.518ENSSFOG00015013823smarca410087.371Scleropages_formosus
ENSRROG00000045509SMARCA410085.749ENSSMAG00000003200smarca4a10085.507Scophthalmus_maximus
ENSRROG00000045509SMARCA410082.051ENSSMAG00000014082-9981.964Scophthalmus_maximus
ENSRROG00000045509SMARCA49986.111ENSSDUG00000005388-9884.342Seriola_dumerili
ENSRROG00000045509SMARCA410083.661ENSSDUG00000017298smarca4a10083.814Seriola_dumerili
ENSRROG00000045509SMARCA410086.671ENSSLDG00000024486smarca4a10086.607Seriola_lalandi_dorsalis
ENSRROG00000045509SMARCA49587.231ENSSLDG00000023663-9787.573Seriola_lalandi_dorsalis
ENSRROG00000045509SMARCA464100.000ENSSARG00000013477SMARCA485100.000Sorex_araneus
ENSRROG00000045509SMARCA49592.602ENSSPUG00000004558SMARCA49892.547Sphenodon_punctatus
ENSRROG00000045509SMARCA410086.292ENSSPAG00000004248smarca4a10086.235Stegastes_partitus
ENSRROG00000045509SMARCA410083.640ENSSPAG00000012533-9983.185Stegastes_partitus
ENSRROG00000045509SMARCA410099.567ENSSSCG00000013629SMARCA410099.567Sus_scrofa
ENSRROG00000045509SMARCA45290.284ENSTGUG00000015488-9299.145Taeniopygia_guttata
ENSRROG00000045509SMARCA49582.807ENSTRUG00000001378SMARCA49883.312Takifugu_rubripes
ENSRROG00000045509SMARCA48981.595ENSTRUG00000004885smarca4a10081.267Takifugu_rubripes
ENSRROG00000045509SMARCA47484.859ENSTNIG00000004859-10084.043Tetraodon_nigroviridis
ENSRROG00000045509SMARCA410083.079ENSTNIG00000004536SMARCA410083.455Tetraodon_nigroviridis
ENSRROG00000045509SMARCA410096.010ENSTTRG00000009519SMARCA410096.010Tursiops_truncatus
ENSRROG00000045509SMARCA410099.690ENSUAMG00000014661SMARCA410099.690Ursus_americanus
ENSRROG00000045509SMARCA410097.522ENSUMAG00000022005SMARCA49999.401Ursus_maritimus
ENSRROG00000045509SMARCA410099.628ENSVVUG00000017820SMARCA49899.631Vulpes_vulpes
ENSRROG00000045509SMARCA410086.400ENSXETG00000009355smarca49987.292Xenopus_tropicalis
ENSRROG00000045509SMARCA49191.870ENSXCOG00000013494-9787.500Xiphophorus_couchianus
ENSRROG00000045509SMARCA410086.630ENSXMAG00000006321smarca4a10086.829Xiphophorus_maculatus
ENSRROG00000045509SMARCA410084.233ENSXMAG00000007030-9983.722Xiphophorus_maculatus

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