EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRROG00000045569 (Gene tree)
Gene ID: 104667812
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Rhinopithecus_roxellana
Status: putative
Strand: Plus strand
Length: 129599 bases
Position: chrKN296557.1:1040720-1170318
Accession: 104667812
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRROP00000045317	ResIII	PF04851.15	5.4e-11	1	1
ENSRROP00000045317	DEAD	PF00270.29	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRROT00000069837	HFM1-201	4852	XM_010370387	ENSRROP00000045317	1435 (aa)	XP_010368689	A0A2K6RWA9

Gene Model

Click here to download ENSRROG00000045569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRROG00000045569's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRROG00000045569	HFM1	58	32.112	ENSRROG00000037952	-	75	32.112
ENSRROG00000045569	HFM1	51	35.127	ENSRROG00000045402	ASCC3	62	35.030

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRROG00000045569	HFM1	100	96.655	ENSG00000162669	HFM1	100	96.655	Homo_sapiens
ENSRROG00000045569	HFM1	63	65.521	ENSAPOG00000005304	hfm1	100	65.521	Acanthochromis_polyacanthus
ENSRROG00000045569	HFM1	100	85.685	ENSAMEG00000000432	HFM1	100	85.685	Ailuropoda_melanoleuca
ENSRROG00000045569	HFM1	70	59.981	ENSACIG00000021553	hfm1	91	59.981	Amphilophus_citrinellus
ENSRROG00000045569	HFM1	63	66.152	ENSAOCG00000022839	hfm1	100	66.152	Amphiprion_ocellaris
ENSRROG00000045569	HFM1	63	65.796	ENSAPEG00000014316	hfm1	100	65.796	Amphiprion_percula
ENSRROG00000045569	HFM1	67	64.050	ENSATEG00000019181	hfm1	80	63.169	Anabas_testudineus
ENSRROG00000045569	HFM1	100	60.082	ENSAPLG00000013639	HFM1	100	60.082	Anas_platyrhynchos
ENSRROG00000045569	HFM1	100	90.953	ENSANAG00000029513	HFM1	100	90.953	Aotus_nancymaae
ENSRROG00000045569	HFM1	70	59.901	ENSACLG00000009033	hfm1	97	65.191	Astatotilapia_calliptera
ENSRROG00000045569	HFM1	85	54.852	ENSAMXG00000006108	hfm1	83	54.852	Astyanax_mexicanus
ENSRROG00000045569	HFM1	100	84.583	ENSBTAG00000020856	HFM1	100	84.583	Bos_taurus
ENSRROG00000045569	HFM1	100	93.101	ENSCJAG00000001843	HFM1	100	93.101	Callithrix_jacchus
ENSRROG00000045569	HFM1	100	85.198	ENSCAFG00000020187	HFM1	100	85.198	Canis_familiaris
ENSRROG00000045569	HFM1	100	86.727	ENSTSYG00000014250	HFM1	100	86.727	Carlito_syrichta
ENSRROG00000045569	HFM1	99	78.288	ENSCPOG00000007421	HFM1	99	78.288	Cavia_porcellus
ENSRROG00000045569	HFM1	100	92.822	ENSCCAG00000033206	HFM1	100	92.822	Cebus_capucinus
ENSRROG00000045569	HFM1	100	97.979	ENSCATG00000030987	HFM1	100	97.979	Cercocebus_atys
ENSRROG00000045569	HFM1	100	80.499	ENSCLAG00000005173	HFM1	99	80.499	Chinchilla_lanigera
ENSRROG00000045569	HFM1	68	96.053	ENSCHOG00000011824	-	77	96.053	Choloepus_hoffmanni
ENSRROG00000045569	HFM1	100	73.601	ENSCGRG00001016995	Hfm1	100	73.601	Cricetulus_griseus_chok1gshd
ENSRROG00000045569	HFM1	100	77.693	ENSCGRG00000017181	Hfm1	100	77.693	Cricetulus_griseus_crigri
ENSRROG00000045569	HFM1	70	59.845	ENSCSEG00000017659	hfm1	93	60.233	Cynoglossus_semilaevis
ENSRROG00000045569	HFM1	50	69.231	ENSCVAG00000005075	hfm1	86	69.231	Cyprinodon_variegatus
ENSRROG00000045569	HFM1	79	54.458	ENSDARG00000104288	hfm1	99	54.458	Danio_rerio
ENSRROG00000045569	HFM1	100	80.728	ENSDNOG00000004776	HFM1	100	80.728	Dasypus_novemcinctus
ENSRROG00000045569	HFM1	100	77.885	ENSDORG00000014661	Hfm1	100	77.885	Dipodomys_ordii
ENSRROG00000045569	HFM1	70	84.896	ENSEASG00005015424	HFM1	98	84.130	Equus_asinus_asinus
ENSRROG00000045569	HFM1	100	83.973	ENSECAG00000024039	HFM1	100	83.973	Equus_caballus
ENSRROG00000045569	HFM1	64	66.166	ENSELUG00000018944	hfm1	99	66.166	Esox_lucius
ENSRROG00000045569	HFM1	100	85.347	ENSFCAG00000029116	HFM1	100	85.347	Felis_catus
ENSRROG00000045569	HFM1	100	59.780	ENSFALG00000001781	HFM1	100	60.194	Ficedula_albicollis
ENSRROG00000045569	HFM1	100	78.979	ENSFDAG00000020816	HFM1	100	78.979	Fukomys_damarensis
ENSRROG00000045569	HFM1	66	60.063	ENSGMOG00000017436	hfm1	100	60.063	Gadus_morhua
ENSRROG00000045569	HFM1	71	61.322	ENSGAFG00000018093	hfm1	99	66.950	Gambusia_affinis
ENSRROG00000045569	HFM1	66	62.126	ENSGACG00000015686	hfm1	100	62.126	Gasterosteus_aculeatus
ENSRROG00000045569	HFM1	100	96.307	ENSGGOG00000038524	HFM1	100	96.307	Gorilla_gorilla
ENSRROG00000045569	HFM1	70	60.887	ENSHBUG00000007309	hfm1	97	59.734	Haplochromis_burtoni
ENSRROG00000045569	HFM1	58	63.038	ENSHCOG00000019632	hfm1	99	63.038	Hippocampus_comes
ENSRROG00000045569	HFM1	66	63.971	ENSIPUG00000017020	hfm1	99	65.357	Ictalurus_punctatus
ENSRROG00000045569	HFM1	100	77.383	ENSJJAG00000017198	Hfm1	100	77.383	Jaculus_jaculus
ENSRROG00000045569	HFM1	62	63.525	ENSKMAG00000002282	hfm1	90	63.596	Kryptolebias_marmoratus
ENSRROG00000045569	HFM1	70	60.609	ENSLBEG00000006759	hfm1	96	65.554	Labrus_bergylta
ENSRROG00000045569	HFM1	66	70.041	ENSLACG00000010698	HFM1	99	66.066	Latimeria_chalumnae
ENSRROG00000045569	HFM1	74	62.897	ENSLOCG00000004931	hfm1	99	62.991	Lepisosteus_oculatus
ENSRROG00000045569	HFM1	52	90.040	ENSLAFG00000015903	-	99	90.040	Loxodonta_africana
ENSRROG00000045569	HFM1	100	94.379	ENSMFAG00000003649	HFM1	100	94.379	Macaca_fascicularis
ENSRROG00000045569	HFM1	100	97.352	ENSMMUG00000006819	HFM1	100	97.352	Macaca_mulatta
ENSRROG00000045569	HFM1	54	70.603	ENSMAMG00000004623	hfm1	97	66.546	Mastacembelus_armatus
ENSRROG00000045569	HFM1	70	59.901	ENSMZEG00005004679	hfm1	97	65.191	Maylandia_zebra
ENSRROG00000045569	HFM1	54	77.423	ENSMGAG00000008437	HFM1	98	77.423	Meleagris_gallopavo
ENSRROG00000045569	HFM1	100	77.778	ENSMAUG00000018858	Hfm1	100	77.778	Mesocricetus_auratus
ENSRROG00000045569	HFM1	100	87.491	ENSMICG00000037935	HFM1	100	87.491	Microcebus_murinus
ENSRROG00000045569	HFM1	100	75.591	ENSMOCG00000014812	Hfm1	100	75.591	Microtus_ochrogaster
ENSRROG00000045569	HFM1	62	64.846	ENSMMOG00000006148	hfm1	99	64.846	Mola_mola
ENSRROG00000045569	HFM1	65	64.034	ENSMALG00000002401	hfm1	100	66.667	Monopterus_albus
ENSRROG00000045569	HFM1	96	71.134	MGP_CAROLIEiJ_G0027496	Hfm1	100	71.134	Mus_caroli
ENSRROG00000045569	HFM1	100	76.495	ENSMUSG00000043410	Hfm1	100	76.495	Mus_musculus
ENSRROG00000045569	HFM1	100	76.356	MGP_PahariEiJ_G0017268	Hfm1	100	76.356	Mus_pahari
ENSRROG00000045569	HFM1	100	76.147	MGP_SPRETEiJ_G0028495	Hfm1	100	76.147	Mus_spretus
ENSRROG00000045569	HFM1	100	81.481	ENSMPUG00000004594	HFM1	100	81.481	Mustela_putorius_furo
ENSRROG00000045569	HFM1	100	82.859	ENSMLUG00000010200	HFM1	100	82.859	Myotis_lucifugus
ENSRROG00000045569	HFM1	65	60.300	ENSNBRG00000002910	hfm1	99	64.421	Neolamprologus_brichardi
ENSRROG00000045569	HFM1	100	91.858	ENSNLEG00000010285	HFM1	100	91.858	Nomascus_leucogenys
ENSRROG00000045569	HFM1	84	64.943	ENSMEUG00000015788	HFM1	84	64.943	Notamacropus_eugenii
ENSRROG00000045569	HFM1	84	78.364	ENSOPRG00000013916	HFM1	84	78.364	Ochotona_princeps
ENSRROG00000045569	HFM1	70	62.194	ENSONIG00000010590	hfm1	99	62.052	Oreochromis_niloticus
ENSRROG00000045569	HFM1	57	65.929	ENSORLG00000026844	hfm1	99	65.929	Oryzias_latipes
ENSRROG00000045569	HFM1	85	49.234	ENSORLG00020002951	hfm1	97	49.042	Oryzias_latipes_hni
ENSRROG00000045569	HFM1	85	54.647	ENSOMEG00000016474	hfm1	83	54.647	Oryzias_melastigma
ENSRROG00000045569	HFM1	85	88.111	ENSOGAG00000032369	HFM1	100	88.111	Otolemur_garnettii
ENSRROG00000045569	HFM1	100	84.525	ENSOARG00000015812	HFM1	100	84.525	Ovis_aries
ENSRROG00000045569	HFM1	92	97.054	ENSPPAG00000024582	HFM1	100	97.054	Pan_paniscus
ENSRROG00000045569	HFM1	100	85.278	ENSPPRG00000003270	HFM1	100	85.278	Panthera_pardus
ENSRROG00000045569	HFM1	100	85.208	ENSPTIG00000018881	HFM1	100	85.208	Panthera_tigris_altaica
ENSRROG00000045569	HFM1	100	96.446	ENSPTRG00000000948	HFM1	100	96.446	Pan_troglodytes
ENSRROG00000045569	HFM1	100	97.909	ENSPANG00000009838	HFM1	100	97.909	Papio_anubis
ENSRROG00000045569	HFM1	62	67.002	ENSPKIG00000003810	hfm1	95	67.515	Paramormyrops_kingsleyae
ENSRROG00000045569	HFM1	58	66.022	ENSPMGG00000011059	hfm1	100	66.022	Periophthalmus_magnuspinnatus
ENSRROG00000045569	HFM1	100	79.833	ENSPEMG00000022852	Hfm1	100	79.833	Peromyscus_maniculatus_bairdii
ENSRROG00000045569	HFM1	100	66.711	ENSPCIG00000014233	HFM1	100	66.644	Phascolarctos_cinereus
ENSRROG00000045569	HFM1	70	61.941	ENSPFOG00000017194	hfm1	99	61.941	Poecilia_formosa
ENSRROG00000045569	HFM1	71	63.415	ENSPLAG00000000571	hfm1	92	63.415	Poecilia_latipinna
ENSRROG00000045569	HFM1	71	63.460	ENSPMEG00000019475	hfm1	92	63.460	Poecilia_mexicana
ENSRROG00000045569	HFM1	70	63.116	ENSPREG00000007803	hfm1	92	66.667	Poecilia_reticulata
ENSRROG00000045569	HFM1	100	96.446	ENSPPYG00000001163	HFM1	100	96.446	Pongo_abelii
ENSRROG00000045569	HFM1	74	81.982	ENSPCAG00000004289	-	74	81.982	Procavia_capensis
ENSRROG00000045569	HFM1	100	77.383	ENSPVAG00000009713	HFM1	100	77.383	Pteropus_vampyrus
ENSRROG00000045569	HFM1	70	59.704	ENSPNYG00000001795	hfm1	97	65.072	Pundamilia_nyererei
ENSRROG00000045569	HFM1	59	67.139	ENSPNAG00000010865	hfm1	84	67.139	Pygocentrus_nattereri
ENSRROG00000045569	HFM1	100	75.382	ENSRNOG00000023299	Hfm1	100	75.382	Rattus_norvegicus
ENSRROG00000045569	HFM1	100	90.523	ENSSBOG00000027456	HFM1	100	90.523	Saimiri_boliviensis_boliviensis
ENSRROG00000045569	HFM1	60	71.329	ENSSHAG00000014616	-	98	71.329	Sarcophilus_harrisii
ENSRROG00000045569	HFM1	86	56.463	ENSSFOG00015020129	hfm1	83	56.463	Scleropages_formosus
ENSRROG00000045569	HFM1	62	64.804	ENSSMAG00000006907	hfm1	87	64.804	Scophthalmus_maximus
ENSRROG00000045569	HFM1	63	64.846	ENSSDUG00000011424	hfm1	100	64.846	Seriola_dumerili
ENSRROG00000045569	HFM1	63	65.904	ENSSLDG00000016386	hfm1	100	65.904	Seriola_lalandi_dorsalis
ENSRROG00000045569	HFM1	62	66.187	ENSSPAG00000001023	hfm1	100	66.187	Stegastes_partitus
ENSRROG00000045569	HFM1	100	81.279	ENSSSCG00000006912	HFM1	100	81.279	Sus_scrofa
ENSRROG00000045569	HFM1	66	75.131	ENSTGUG00000006172	HFM1	100	75.131	Taeniopygia_guttata
ENSRROG00000045569	HFM1	100	81.319	ENSTTRG00000013933	HFM1	100	81.319	Tursiops_truncatus
ENSRROG00000045569	HFM1	93	83.373	ENSVPAG00000011331	HFM1	93	83.373	Vicugna_pacos
ENSRROG00000045569	HFM1	71	82.478	ENSVVUG00000020760	HFM1	99	82.478	Vulpes_vulpes
ENSRROG00000045569	HFM1	63	66.350	ENSXMAG00000004178	hfm1	100	66.350	Xiphophorus_maculatus